Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 3.1e-99 365.2 187 100.0
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.8e-59 233.0 137 89.1
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 4.5e-50 201.8 140 77.1
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.2e-45 187.2 141 73.0
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.8e-43 179.9 140 67.9
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.0e-41 171.8 137 68.6
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.9e-40 169.9 139 61.9
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 9.5e-40 167.5 142 63.4
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 2.0e-37 159.8 140 63.6
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 4.4e-37 158.7 138 65.9
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 4.4e-37 158.7 143 62.9
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 1.3e-36 157.1 138 65.9
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.9e-36 155.2 138 64.5
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 8.3e-36 154.5 116 73.3
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.1e-35 154.1 95 83.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.1e-35 154.1 144 62.5
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.1e-35 154.1 137 61.3
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.4e-35 153.7 141 61.7
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 1.4e-35 153.7 137 59.9
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.8e-35 153.3 140 63.6
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.8e-35 153.3 141 59.6
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.4e-35 152.9 140 62.1
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.4e-35 152.9 118 71.2
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.4e-35 152.9 138 63.8
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 3.2e-35 152.5 137 65.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 3.2e-35 152.5 137 61.3
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 3.2e-35 152.5 142 62.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 4.1e-35 152.1 95 77.9
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 5.4e-35 151.8 118 66.9
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 7.0e-35 151.4 138 62.3
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 7.0e-35 151.4 137 61.3
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 7.0e-35 151.4 140 60.0
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 7.0e-35 151.4 115 68.7
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 9.2e-35 151.0 108 69.4
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 1.2e-34 150.6 139 61.2
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.2e-34 150.6 97 78.4
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.2e-34 150.6 97 78.4
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.2e-34 150.6 97 78.4
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.2e-34 150.6 97 78.4
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.2e-34 150.6 141 59.6
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.2e-34 150.6 92 81.5
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.6e-34 150.2 104 74.0
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.6e-34 150.2 129 61.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.6e-34 150.2 141 61.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 2.0e-34 149.8 137 62.0
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.7e-34 149.4 129 61.2
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.7e-34 149.4 142 58.5
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 3.5e-34 149.1 94 76.6
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 4.6e-34 148.7 95 77.9
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 5.9e-34 148.3 118 65.3
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 7.8e-34 147.9 94 78.7
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 7.8e-34 147.9 121 67.8
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.0e-33 147.5 144 60.4
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 1.3e-33 147.1 97 75.3
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.3e-33 147.1 137 60.6
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.3e-33 147.1 101 72.3
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 1.7e-33 146.7 98 76.5
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 2.3e-33 146.4 100 74.0
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 3.0e-33 146.0 96 79.2
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 3.9e-33 145.6 107 67.3
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 3.9e-33 145.6 93 76.3
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 3.9e-33 145.6 95 76.8
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 6.6e-33 144.8 144 57.6
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 8.6e-33 144.4 123 63.4
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 8.6e-33 144.4 93 75.3
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 8.6e-33 144.4 150 54.7
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.1e-32 144.1 160 55.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.9e-32 143.3 115 63.5
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.9e-32 143.3 132 58.3
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 2.5e-32 142.9 137 60.6
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.5e-32 142.9 99 75.8
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.3e-32 142.1 99 73.7
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.3e-32 142.1 94 76.6
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 5.6e-32 141.7 137 59.1
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 7.3e-32 141.4 90 77.8
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 9.5e-32 141.0 85 81.2
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 9.5e-32 141.0 94 75.5
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.5e-32 141.0 94 75.5
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 9.5e-32 141.0 92 72.8
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 9.5e-32 141.0 122 63.9
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.6e-31 140.2 82 81.7
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.1e-31 139.8 137 56.9
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.1e-31 139.8 94 75.5
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 2.8e-31 139.4 94 73.4
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 3.6e-31 139.0 96 69.8
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 4.7e-31 138.7 83 80.7
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.7e-31 138.7 134 59.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 6.2e-31 138.3 82 80.5
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 8.0e-31 137.9 137 59.1
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 8.0e-31 137.9 92 73.9
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 1.0e-30 137.5 95 76.8
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.8e-30 136.7 109 67.9
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 4.0e-30 135.6 93 75.3
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.0e-30 135.6 132 54.5
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 1.2e-29 134.0 132 53.8
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.5e-29 133.7 96 72.9
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.0e-29 133.3 134 60.4
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 2.2e-28 129.8 104 68.3
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 2.2e-28 129.8 82 74.4
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.7e-28 129.0 96 68.8
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 7.0e-27 124.8 139 55.4
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.6e-23 113.6 85 67.1
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.2e-21 107.5 99 59.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.7e-17 93.6 95 56.8
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.5e-16 89.7 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.1e-15 86.7 89 57.3
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 8.1e-07 58.2 103 41.7


User provided reference genes

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