Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G1285 Vigna mungo HOM05D002082 ORTHO05D000001 3.4e-71 271.6 138 100.0
Phvul.008G062300 Phaseolus vulgaris HOM05D002082 ORTHO05D002130 1.5e-10 70.1 70 52.9
Glyma.09G259200 Glycine max HOM05D002082 ORTHO05D002130 2.0e-10 69.7 70 51.4
Glyma.03G009000 Glycine max HOM05D002082 ORTHO05D002130 1.4e-08 63.5 36 80.6
Lj1g0019851 Lotus japonicus HOM05D002082 ORTHO05D002130 1.4e-08 63.5 81 44.4
Lj3g0021962 Lotus japonicus HOM05D002082 ORTHO05D002130 1.9e-08 63.2 40 72.5
Glyma.07G070500 Glycine max HOM05D002082 ORTHO05D002130 3.2e-08 62.4 36 77.8
VMungo1127G0874 Vigna mungo HOM05D000002 ORTHO05D000001 4.1e-08 62.0 60 55.0
Glyma.18G233100 Glycine max HOM05D002082 ORTHO05D002130 9.2e-08 60.8 70 50.0
arahy.Tifrunner.gnm1.ann1.7UV203 Arachis hypogaea HOM05D002082 ORTHO05D002130 1.2e-07 60.5 70 42.9
arahy.Tifrunner.gnm1.ann1.XE9T79 Arachis hypogaea HOM05D002082 ORTHO05D002130 1.2e-07 60.5 70 42.9
Medtr7g077740 Medicago truncatula HOM05D002082 ORTHO05D002130 2.1e-07 59.7 75 45.3
QL08p048793 Quercus lobata HOM05D002082 ORTHO05D002130 3.5e-07 58.9 52 59.6
Lalb_Chr04g0256961 Lupinus albus HOM05D002082 ORTHO05D002130 4.6e-07 58.5 36 72.2
arahy.Tifrunner.gnm1.ann1.Q9SV2L Arachis hypogaea HOM05D002082 ORTHO05D002130 7.8e-07 57.8 112 30.4
Gohir.A03G095500 Gossypium hirsutum HOM05D002082 ORTHO05D002130 1.0e-06 57.4 83 41.0
Phvul.010G099200 Phaseolus vulgaris HOM05D002082 ORTHO05D002130 1.0e-06 57.4 76 44.7
VMungo0331G0292 Vigna mungo HOM05D000002 ORTHO05D000001 1.3e-06 57.0 60 51.7
VMungo0331G1957 Vigna mungo HOM05D000002 ORTHO05D000001 1.3e-06 57.0 60 51.7
arahy.Tifrunner.gnm1.ann1.H5386A Arachis hypogaea HOM05D002082 ORTHO05D002130 1.7e-06 56.6 112 31.2
Cpa.g.sc11.5 Carica papaya HOM05D002082 ORTHO05D002130 1.7e-06 56.6 59 49.2
Ca_07921_v3 Cicer arietinum L. HOM05D002082 ORTHO05D002130 1.7e-06 56.6 70 41.4
Atru.chr5.499 Acer truncatum HOM05D002082 ORTHO05D002130 3.0e-06 55.8 43 62.8
Gorai.005G129500 Gossypium raimondii HOM05D002082 ORTHO05D002130 3.0e-06 55.8 99 35.4
TPR.G37805 Trifolium pratense HOM05D002082 ORTHO05D002130 3.0e-06 55.8 80 40.0
TWI23G1246 Tripterygium wilfordii HOM05D002082 ORTHO05D002130 3.0e-06 55.8 69 44.9
Ca_23632_v3 Cicer arietinum L. HOM05D002082 ORTHO05D002130 3.9e-06 55.5 89 33.7
MD01G1060800 Malus domestica HOM05D002082 ORTHO05D002130 3.9e-06 55.5 52 57.7
Manes.01G256600 Manihot esculenta HOM05D002082 ORTHO05D002130 3.9e-06 55.5 39 66.7
Lalb_Chr17g0339601 Lupinus albus HOM05D002082 ORTHO05D002130 5.1e-06 55.1 72 44.4
Ciclev10018716m.g Citrus clementina HOM05D002082 ORTHO05D002130 6.6e-06 54.7 40 65.0
VMungo0331G1047 Vigna mungo HOM05D008963 ORTHO05D000001 6.6e-06 54.7 60 50.0
Medtr0127s0030 Medicago truncatula HOM05D008963 ORTHO05D000001 8.6e-06 54.3 75 42.7
Potri.014G084600 Populus trichocarpa HOM05D002082 ORTHO05D002130 8.6e-06 54.3 118 31.4
VMungo0464G0123 Vigna mungo HOM05D000002 ORTHO05D000001 8.6e-06 54.3 60 50.0


User provided reference genes

Program Settings