Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1383G0610 Vigna mungo HOM05D000265 ORTHO05D000161 4.0e-81 304.7 152 100.0
VMungo1350G0001 Vigna mungo HOM05D000265 ORTHO05D000161 5.9e-24 114.8 85 70.6
Phvul.001G195700 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 7.7e-24 114.4 69 82.6
Glyma.03G202200 Glycine max HOM05D000265 ORTHO05D000161 1.7e-23 113.2 69 82.6
VMungo1383G2867 Vigna mungo HOM05D000265 ORTHO05D000161 2.9e-23 112.5 69 81.2
Glyma.19G199900 Glycine max HOM05D000265 ORTHO05D000161 5.0e-23 111.7 69 81.2
Medtr7g106260 Medicago truncatula HOM05D000265 ORTHO05D000161 3.7e-18 95.5 69 75.4
Ca_09058_v3 Cicer arietinum L. HOM05D000265 ORTHO05D000161 4.9e-18 95.1 69 76.8
TPR.G35564 Trifolium pratense HOM05D000265 ORTHO05D000161 6.3e-18 94.7 85 63.5
Lj1g0006008 Lotus japonicus HOM05D000265 ORTHO05D000161 1.2e-16 90.5 97 56.7
CiPaw.09G021000 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.3e-15 87.0 69 63.8
arahy.Tifrunner.gnm1.ann1.V6MC97 Arachis hypogaea HOM05D000265 ORTHO05D000161 9.5e-14 80.9 65 70.8
Gohir.A09G134000 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.6e-13 80.1 88 55.7
Gohir.D09G130400 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.6e-13 80.1 88 55.7
Gorai.006G149200 Gossypium raimondii HOM05D000265 ORTHO05D000161 1.6e-13 80.1 88 55.7
Manes.08G033800 Manihot esculenta HOM05D000265 ORTHO05D000161 2.8e-13 79.3 94 48.9
Sabra06G0156300 Salix brachista HOM05D000265 ORTHO05D000161 3.6e-13 79.0 69 66.7
arahy.Tifrunner.gnm1.ann1.MC9SJZ Arachis hypogaea HOM05D000265 ORTHO05D000161 4.7e-13 78.6 66 69.7
Potri.006G203100 Populus trichocarpa HOM05D000265 ORTHO05D000161 1.8e-12 76.6 69 65.2
Prupe.7G094400 Prunus persica HOM05D000265 ORTHO05D000161 1.8e-12 76.6 83 54.2
MD12G1040500 Malus domestica HOM05D000265 ORTHO05D000161 2.3e-12 76.3 86 52.3
Cfa020031 Carpinus fangiana HOM05D000265 ORTHO05D000161 3.0e-12 75.9 58 67.2
CiPaw.10G017800 Carya illinoinensis HOM05D000265 ORTHO05D000161 3.0e-12 75.9 69 59.4
Lj1C1053G6 Lonicera japonica HOM05D000265 ORTHO05D000161 6.8e-12 74.7 59 62.7
Thecc.05G104800 Theobroma cacao HOM05D000265 ORTHO05D000161 8.9e-12 74.3 85 55.3
Haze_20182 Corylus avellana HOM05D000265 ORTHO05D000161 1.2e-11 73.9 58 67.2
Sed0012603 Sechium edule HOM05D000265 ORTHO05D000161 1.2e-11 73.9 88 52.3
Manes.09G045500 Manihot esculenta HOM05D000265 ORTHO05D000161 4.4e-11 72.0 72 55.6
Duzib093G1323 Durio zibethinus HOM05D000265 ORTHO05D000161 5.7e-11 71.6 58 67.2
Gohir.D04G091300 Gossypium hirsutum HOM05D000265 ORTHO05D000161 5.7e-11 71.6 63 60.3
Gorai.009G397200 Gossypium raimondii HOM05D000265 ORTHO05D000161 5.7e-11 71.6 63 60.3
MD14G1039500 Malus domestica HOM05D000265 ORTHO05D000161 5.7e-11 71.6 86 51.2
VMungo0331G1012 Vigna mungo HOM05D000265 ORTHO05D000161 7.5e-11 71.2 52 71.2
Potri.016G070100 Populus trichocarpa HOM05D000265 ORTHO05D000161 9.8e-11 70.9 59 66.1
Gohir.A04G057900 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.3e-10 70.5 63 58.7
Sed0020281 Sechium edule HOM05D000265 ORTHO05D000161 1.7e-10 70.1 83 49.4
PSO339G4612 Papaver somniferum HOM05D000265 ORTHO05D000161 2.2e-10 69.7 69 50.7
Duzib106G0130 Durio zibethinus HOM05D000265 ORTHO05D000161 2.9e-10 69.3 59 69.5
QL07p036668 Quercus lobata HOM05D000265 ORTHO05D000161 2.9e-10 69.3 74 59.5
PSO384G4446 Papaver somniferum HOM05D000265 ORTHO05D000161 4.9e-10 68.6 69 50.7
TWI74G0813 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 6.4e-10 68.2 64 60.9
TAR636G3529 Trochodendron aralioides HOM05D000265 ORTHO05D000161 1.1e-09 67.4 62 53.2
RcHm_v2.0_Chr3g0475951 Rosa chinensis HOM05D000265 ORTHO05D000161 1.4e-09 67.0 87 50.6
Atru.chr8.1357 Acer truncatum HOM05D000265 ORTHO05D000161 1.8e-09 66.6 88 47.7
Sed0023191 Sechium edule HOM05D000265 ORTHO05D000161 2.4e-09 66.2 81 51.9
Atru.chr12.999 Acer truncatum HOM05D000265 ORTHO05D000161 3.2e-09 65.9 88 46.6
TAR633G0444 Trochodendron aralioides HOM05D000265 ORTHO05D000161 4.1e-09 65.5 61 57.4
COL.COLO4_29571 Corchorus olitorius HOM05D000265 ORTHO05D000161 5.4e-09 65.1 89 47.2
Ciclev10013861m.g Citrus clementina HOM05D000265 ORTHO05D000161 7.0e-09 64.7 61 62.3
FAN05G3207 Fragaria x ananassa HOM05D000265 ORTHO05D000161 7.0e-09 64.7 86 51.2
FAN05G0045 Fragaria x ananassa HOM05D000265 ORTHO05D000161 9.2e-09 64.3 86 50.0
FAN09G1042 Fragaria x ananassa HOM05D000265 ORTHO05D000161 9.2e-09 64.3 86 50.0
Hma1.2p1_0079F.1_g041810 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 9.2e-09 64.3 70 55.7
FvH4_6g20330 Fragaria vesca HOM05D000265 ORTHO05D000161 1.6e-08 63.5 86 50.0
FAN02G3986 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.6e-08 63.5 86 48.8
FAN14G3871 Fragaria x ananassa HOM05D000265 ORTHO05D000161 1.6e-08 63.5 86 50.0
Nn2g14312 Nelumbo nucifera HOM05D000265 ORTHO05D000161 2.0e-08 63.2 62 53.2
Rhsim03G0064400 Rhododendron simsii HOM05D000265 ORTHO05D000161 2.0e-08 63.2 59 59.3
TWI53G0940 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 2.7e-08 62.8 83 47.0
Nn6g34686 Nelumbo nucifera HOM05D000265 ORTHO05D000161 3.5e-08 62.4 62 51.6
Dinv12339 Davidia involucrata HOM05D000265 ORTHO05D000161 4.6e-08 62.0 63 58.7
VMungo0780G0001 Vigna mungo HOM05D000265 ORTHO05D000161 4.6e-08 62.0 48 68.8
Rhsim03G0066100 Rhododendron simsii HOM05D000265 ORTHO05D000161 5.9e-08 61.6 92 40.2
THA.LOC104816624 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 5.9e-08 61.6 82 43.9
Potri.016G070000 Populus trichocarpa HOM05D000265 ORTHO05D000161 7.8e-08 61.2 57 68.4
CsaV3_3G037990 Cucumis sativus L. HOM05D000265 ORTHO05D000161 1.0e-07 60.8 65 55.4
PGR142G0943 Punica granatum HOM05D000265 ORTHO05D000161 1.7e-07 60.1 71 50.7
TAR003G0007 Trochodendron aralioides HOM05D000265 ORTHO05D000161 1.7e-07 60.1 69 46.4
A05p37650 Brassica napus HOM05D000265 ORTHO05D000161 2.3e-07 59.7 67 50.7
BraA05t22562Z Brassica rapa HOM05D000265 ORTHO05D000161 2.3e-07 59.7 67 50.7
CARHR086230 Cardamine hirsuta HOM05D000265 ORTHO05D000161 2.3e-07 59.7 71 47.9
MELO3C009541.2 Cucumis melo HOM05D000265 ORTHO05D000161 2.3e-07 59.7 59 61.0
EL10Ac5g12967 Beta vulgaris HOM05D000265 ORTHO05D000161 3.0e-07 59.3 62 59.7
BcaC01g03166 Brassica carinata HOM05D000265 ORTHO05D000161 3.0e-07 59.3 90 42.2
BcaB06g25593 Brassica carinata HOM05D000265 ORTHO05D000161 3.9e-07 58.9 68 47.1
ClCG10G018330 Citrullus lanatus HOM05D000265 ORTHO05D000161 3.9e-07 58.9 85 45.9
AT3G11680 Arabidopsis thaliana HOM05D000265 ORTHO05D000161 6.6e-07 58.2 67 49.3
BraA01t04168Z Brassica rapa HOM05D000265 ORTHO05D000161 6.6e-07 58.2 68 50.0
CANSAT64G0347 Cannabis sativa HOM05D000265 ORTHO05D000161 6.6e-07 58.2 69 55.1
Dinv17101 Davidia involucrata HOM05D000265 ORTHO05D000161 6.6e-07 58.2 71 45.1
Aa31LG3G5100 Aethionema arabicum HOM05D000265 ORTHO05D000161 8.6e-07 57.8 67 49.3
BNapus_Darmor_BZH_scaffold_145p00010 Brassica napus HOM05D000265 ORTHO05D000161 1.5e-06 57.0 68 50.0
AUR62036381 Chenopodium quinoa HOM05D000265 ORTHO05D000161 1.9e-06 56.6 62 54.8
ClCG01G007000 Citrullus lanatus HOM05D000265 ORTHO05D000161 1.9e-06 56.6 69 50.7
CsaV3_6G041130 Cucumis sativus L. HOM05D000265 ORTHO05D000161 1.9e-06 56.6 77 51.9
AL3G23240 Arabidopsis lyrata HOM05D000265 ORTHO05D000161 2.5e-06 56.2 67 49.3
AUR62030743 Chenopodium quinoa HOM05D000265 ORTHO05D000161 2.5e-06 56.2 62 53.2
Sopen10g032400 Solanum pennellii HOM05D000265 ORTHO05D000161 2.5e-06 56.2 69 50.7
BcaB06g25592 Brassica carinata HOM05D000265 ORTHO05D000161 3.3e-06 55.8 67 47.8
C05p56240 Brassica napus HOM05D000265 ORTHO05D000161 3.3e-06 55.8 67 47.8
BolC1t05299H Brassica oleracea HOM05D000265 ORTHO05D000161 3.3e-06 55.8 68 48.5
Thhalv10022400m.g Eutrema salsugineum HOM05D000265 ORTHO05D000161 3.3e-06 55.8 67 47.8
Peaxi162Scf00211g00411 Petunia axillaris HOM05D000265 ORTHO05D000161 3.3e-06 55.8 62 56.5
Sp3g09910 Schrenkiella parvula HOM05D000265 ORTHO05D000161 3.3e-06 55.8 69 49.3
ClCG01G015030 Citrullus lanatus HOM05D000265 ORTHO05D000161 4.3e-06 55.5 58 60.3
MELO3C024588.2 Cucumis melo HOM05D000265 ORTHO05D000161 4.3e-06 55.5 94 42.6
BolC5t34287H Brassica oleracea HOM05D000265 ORTHO05D000161 5.6e-06 55.1 67 47.8
PGSC0003DMG400028146 Solanum tuberosum HOM05D000265 ORTHO05D000161 5.6e-06 55.1 68 48.5
Carub.0003s1101 Capsella rubella HOM05D000265 ORTHO05D000161 7.3e-06 54.7 65 50.8
Dinv17103 Davidia involucrata HOM05D000265 ORTHO05D000161 7.3e-06 54.7 71 43.7
Nitab4.5_0005513g0010 Nicotiana tabacum HOM05D000265 ORTHO05D000161 7.3e-06 54.7 63 57.1
TAR623G1604 Trochodendron aralioides HOM05D000265 ORTHO05D000161 9.5e-06 54.3 59 52.5


User provided reference genes

Program Settings