Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 0.0e+00 1518.1 861 100.0
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 0.0e+00 1348.2 871 89.9
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 0.0e+00 1276.2 876 85.0
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 0.0e+00 1217.2 880 80.0
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 0.0e+00 1143.3 859 74.7
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 0.0e+00 1135.9 835 74.9
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 0.0e+00 1134.8 835 74.3
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 0.0e+00 1110.1 880 72.6
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 0.0e+00 1090.5 884 70.9
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 0.0e+00 1078.2 873 71.5
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 2.7e-299 1031.9 880 69.1
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 2.5e-289 998.8 877 67.8
Lalb_Chr23g0271841 Lupinus albus HOM05D003640 ORTHO05D004439 2.9e-277 958.7 867 64.5
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 1.5e-265 919.8 863 62.1
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.3e-261 906.7 853 61.0
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 5.0e-261 904.8 855 61.1
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 4.7e-259 898.3 903 59.0
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 2.8e-256 889.0 860 62.9
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 3.5e-254 882.1 854 61.5
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 8.5e-253 877.5 860 60.2
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 1.1e-247 860.5 876 58.9
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 7.0e-247 857.8 841 58.5
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 2.7e-246 855.9 853 60.1
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 3.5e-246 855.5 795 61.0
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 9.5e-244 847.4 885 58.1
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.6e-243 846.7 843 59.1
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 2.6e-241 839.3 875 57.9
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 7.5e-241 837.8 872 59.4
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 3.9e-237 825.5 870 56.6
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 4.7e-235 818.5 875 57.0
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 8.0e-235 817.8 846 56.5
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 1.0e-234 817.4 848 58.3
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 5.2e-234 815.1 877 56.4
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.5e-233 813.5 857 56.4
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 1.1e-231 807.4 841 57.8
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.9e-231 806.6 891 54.4
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 4.1e-231 805.4 887 54.2
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 9.2e-231 804.3 860 56.5
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 6.6e-229 798.1 879 55.6
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 6.6e-229 798.1 849 54.7
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 4.3e-228 795.4 914 53.9
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.8e-227 792.7 879 55.6
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 4.7e-227 792.0 764 60.9
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 1.1e-226 790.8 893 54.4
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.8e-226 790.0 847 56.0
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.8e-226 790.0 891 53.3
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 2.3e-226 789.6 916 52.4
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 3.1e-226 789.3 871 58.3
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 8.9e-226 787.7 889 54.1
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 3.7e-224 782.3 806 59.1
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 6.4e-224 781.6 852 56.7
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.1e-223 780.8 871 55.9
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 4.1e-223 778.9 854 54.9
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.2e-222 777.3 802 57.5
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.7e-222 776.2 874 55.1
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.7e-221 773.5 871 55.7
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 9.5e-220 767.7 857 55.7
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 6.2e-219 765.0 795 57.7
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 2.0e-217 760.0 885 52.1
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 5.8e-217 758.4 822 54.1
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.3e-216 757.3 765 58.2
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.2e-215 752.7 872 54.7
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.0e-213 746.1 849 52.3
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 9.0e-202 708.0 873 50.9
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.5e-201 707.2 849 51.8
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 7.6e-201 704.9 870 53.4
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 2.9e-200 703.0 760 56.3
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 8.4e-200 701.4 870 53.1
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 1.6e-198 697.2 907 49.7
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.5e-196 690.6 870 52.9
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 1.3e-195 687.6 855 51.2
PGR142G2086 Punica granatum HOM05D003640 ORTHO05D004439 3.6e-195 686.0 841 52.7
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 4.8e-195 685.6 813 52.6
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.2e-192 676.8 846 51.1
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 1.2e-190 671.0 851 51.2
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 1.2e-190 671.0 860 49.8
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.6e-190 670.6 805 51.8
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 3.9e-189 666.0 869 49.4
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 1.8e-186 657.1 842 50.6
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 3.4e-185 652.9 848 51.1
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 6.5e-184 648.7 887 48.9
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 1.4e-183 647.5 804 51.2
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 7.1e-183 645.2 845 50.1
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 2.3e-181 640.2 869 47.4
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 5.1e-181 639.0 868 47.7
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 6.7e-181 638.6 812 52.3
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.3e-176 624.4 846 48.7
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 1.1e-175 621.3 839 47.4
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 1.1e-175 621.3 662 56.6
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 4.6e-174 615.9 859 48.7
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 4.8e-171 605.9 859 48.3
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 3.4e-169 599.7 675 54.1
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.5e-169 599.4 843 46.7
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 1.3e-168 597.8 819 47.5
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 1.3e-168 597.8 792 48.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 3.6e-166 589.7 792 47.5
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 4.6e-166 589.3 845 49.8
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 6.1e-166 589.0 749 50.2
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 1.4e-165 587.8 800 49.1
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 5.1e-165 585.9 859 47.6
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 1.4e-162 577.8 795 47.7
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 1.7e-160 570.9 707 51.6
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 1.4e-159 567.8 857 46.0
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 3.6e-158 563.1 839 44.1
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 2.2e-155 553.9 761 47.6
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 3.5e-153 546.6 726 49.7
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 1.8e-149 534.3 733 47.5
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 3.0e-149 533.5 616 52.4
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 1.3e-147 528.1 770 45.5
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 1.1e-143 515.0 760 45.0
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 1.5e-143 514.6 761 44.8
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 6.1e-142 509.2 848 43.5
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 4.4e-140 503.1 721 48.8
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 7.5e-140 502.3 830 42.7
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 1.8e-138 497.7 740 47.6
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 1.8e-138 497.7 716 46.6
Os08g0543600 Oryza sativa ssp. japonica HOM05D003640 ORTHO05D004439 4.1e-138 496.5 857 40.7
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 7.2e-135 485.7 714 48.5
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 6.1e-134 482.6 719 47.8
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 2.3e-133 480.7 718 48.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 5.7e-132 476.1 843 41.9
Zm00001eb198460 Zea mays HOM05D003640 ORTHO05D004439 1.7e-128 464.5 858 39.4
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 2.3e-128 464.2 735 45.4
Zm00001eb037420 Zea mays HOM05D003640 ORTHO05D004439 7.2e-127 459.1 857 39.0
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 7.3e-119 432.6 686 45.5
CDE04G2417 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 2.8e-118 430.6 794 39.5
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 2.3e-112 411.0 738 43.4
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 5.2e-109 399.8 719 41.4
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 5.2e-109 399.8 730 40.7
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 2.6e-108 397.5 731 40.8
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 1.7e-107 394.8 504 50.8
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 2.1e-105 387.9 732 40.4
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 5.1e-104 383.3 318 66.4
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 5.1e-104 383.3 318 66.4
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 6.6e-104 382.9 733 40.2
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 1.6e-102 378.3 687 41.8
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea HOM05D003640 ORTHO05D004439 4.1e-98 363.6 424 53.5
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 1.3e-91 342.0 421 47.7
RcHm_v2.0_Chr1g0382631 Rosa chinensis HOM05D003640 ORTHO05D004439 1.9e-82 311.6 375 52.0
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 4.3e-71 273.9 657 33.9
Mapoly0021s0043 Marchantia polymorpha HOM05D003640 ORTHO05D004439 2.8e-70 271.2 983 29.2
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 1.2e-68 265.8 731 35.6
Pp3c14_13150 Physcomitrium patens HOM05D003640 ORTHO05D004439 2.1e-65 255.0 897 30.8
RcHm_v2.0_Chr1g0382611 Rosa chinensis HOM05D003640 ORTHO05D004439 2.1e-62 245.0 288 53.5
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 1.2e-60 239.2 728 31.5
Pp3c17_17470 Physcomitrium patens HOM05D003640 ORTHO05D004439 3.4e-60 237.7 911 28.8
CDE07G0792 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 1.1e-47 196.1 671 30.1
SEGI_36158 Sequoiadendron giganteum HOM05D003640 ORTHO05D004439 1.1e-45 189.5 346 37.3
PSO782G5739 Papaver somniferum HOM05D003640 ORTHO05D004439 9.4e-42 176.4 156 60.3
A03p14940 Brassica napus HOM05D003640 ORTHO05D004439 1.3e-38 166.0 123 69.1
BraA03t10789Z Brassica rapa HOM05D003640 ORTHO05D004439 2.2e-38 165.2 139 64.7
RcHm_v2.0_Chr1g0382641 Rosa chinensis HOM05D003640 ORTHO05D004439 3.5e-36 157.9 158 59.5
HanXRQChr03g0061701 Helianthus annuus HOM05D003640 ORTHO05D004439 6.7e-32 143.7 167 50.3
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 8.8e-32 143.3 208 43.8
Potri.016G069900 Populus trichocarpa HOM05D003640 ORTHO05D034990 4.2e-26 124.4 77 84.4
HanXRQChr15g0479781 Helianthus annuus HOM05D003640 ORTHO05D004439 2.6e-23 115.2 133 48.1
HanXRQChr06g0170111 Helianthus annuus HOM05D003640 ORTHO05D004439 7.5e-23 113.6 121 49.6
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.8e-22 110.9 130 52.3
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 7.0e-21 107.1 122 57.4
CDE04G2700 Ceratophyllum demersum HOM05D003640 ORTHO05D004439 3.5e-20 104.8 151 41.1
Dinv35373 Davidia involucrata HOM05D003640 ORTHO05D004439 7.2e-18 97.1 73 67.1
PSO017G5262 Papaver somniferum HOM05D003640 ORTHO05D004439 7.5e-15 87.0 189 36.0
PSO170G6851 Papaver somniferum HOM05D003640 ORTHO05D004439 7.0e-13 80.5 165 37.6
C09p43560 Brassica napus HOM05D003640 ORTHO05D004439 1.0e-11 76.6 85 49.4
BolC9t57239H Brassica oleracea HOM05D003640 ORTHO05D004439 1.0e-11 76.6 85 49.4
AL8G28750 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 1.9e-10 72.4 200 35.5
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 2.5e-10 72.0 209 32.5
BolC2t07935H Brassica oleracea HOM05D003640 ORTHO05D004439 4.3e-10 71.2 397 25.7
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 4.3e-10 71.2 49 69.4
PGR042G3558 Punica granatum HOM05D000045 ORTHO05D000611 1.0e-08 66.6 124 38.7
C02p18030 Brassica napus HOM05D003640 ORTHO05D004439 1.4e-08 66.2 440 24.1
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 3.0e-08 65.1 196 33.7
MELO3C010660.2 Cucumis melo HOM05D003640 ORTHO05D004439 6.8e-08 63.9 45 71.1
COL.COLO4_24960 Corchorus olitorius HOM05D003640 ORTHO05D004439 2.6e-07 62.0 110 41.8
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea HOM05D003640 ORTHO05D082470 7.5e-07 60.5 63 57.1
CsaV3_6G021420 Cucumis sativus L. HOM05D003640 ORTHO05D034990 1.7e-06 59.3 53 62.3


User provided reference genes

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