Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 0.0e+00 1080.1 523 100.0
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.2e-281 972.6 495 93.9
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.2e-265 919.5 493 88.8
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.7e-265 918.3 496 88.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 2.1e-246 855.5 495 82.2
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 9.8e-244 846.7 487 81.5
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 3.7e-243 844.7 481 82.1
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 5.4e-242 840.9 498 80.7
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.9e-239 832.4 488 80.3
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 6.8e-237 823.9 495 78.4
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 5.8e-236 820.8 481 80.7
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 8.3e-227 790.4 490 75.3
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 4.6e-225 784.6 495 73.3
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 3.9e-224 781.6 479 76.4
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 2.1e-222 775.8 488 74.0
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.1e-221 773.5 491 72.3
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 1.4e-221 773.1 491 72.3
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 8.9e-221 770.4 486 74.1
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 8.9e-221 770.4 486 74.5
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.5e-220 769.6 491 73.1
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 2.9e-219 765.4 487 74.1
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 3.8e-219 765.0 487 73.5
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 1.4e-218 763.1 486 73.3
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 2.4e-218 762.3 484 73.1
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 3.2e-218 761.9 491 72.5
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.2e-217 760.0 484 72.5
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 1.6e-217 759.6 486 72.6
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 7.8e-217 757.3 487 72.1
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.3e-216 756.5 497 73.0
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.3e-216 755.7 482 72.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 3.3e-215 751.9 486 72.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 9.6e-215 750.4 496 72.0
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 9.6e-215 750.4 507 69.2
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 9.6e-215 750.4 490 71.6
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.6e-214 749.6 485 72.4
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.8e-214 748.8 493 70.0
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 1.8e-213 746.1 488 69.9
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 3.1e-213 745.3 486 72.0
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.8e-212 741.1 490 71.0
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 5.8e-212 741.1 498 71.7
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.7e-211 739.6 480 71.7
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 2.2e-211 739.2 493 70.8
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 4.9e-211 738.0 483 71.4
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 1.1e-210 736.9 487 70.8
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 3.2e-210 735.3 484 68.8
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 9.3e-210 733.8 497 70.4
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.2e-209 733.4 496 68.1
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 6.0e-209 731.1 491 69.9
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 6.0e-209 731.1 481 70.9
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 7.8e-209 730.7 491 70.3
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.0e-208 730.3 488 69.9
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.3e-208 729.9 501 68.1
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.3e-208 729.2 491 69.5
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.9e-208 728.4 491 69.9
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 6.6e-208 727.6 490 70.0
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.1e-207 726.9 525 66.5
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 7.3e-207 724.2 487 69.6
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 9.6e-207 723.8 487 69.2
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.6e-206 723.0 485 70.5
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.0e-205 718.4 487 68.8
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 2.6e-204 715.7 489 68.7
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.4e-204 715.3 471 70.9
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.4e-202 709.9 494 69.2
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 1.4e-202 709.9 487 68.2
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.4e-202 709.9 485 68.9
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 9.3e-202 707.2 483 67.7
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.2e-201 706.8 449 74.2
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.2e-201 706.8 475 70.1
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 1.6e-201 706.4 489 68.3
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.8e-200 703.0 484 68.0
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.3e-200 702.6 498 70.7
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 5.6e-199 698.0 488 67.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 5.6e-199 698.0 453 71.1
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 7.4e-199 697.6 483 69.2
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 9.6e-199 697.2 490 67.1
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 1.3e-198 696.8 484 68.6
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 2.1e-198 696.0 487 66.7
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 8.1e-198 694.1 484 66.3
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.4e-197 692.6 484 66.7
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.5e-196 689.9 487 66.3
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.5e-196 689.9 494 67.0
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 5.8e-196 688.0 495 67.7
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 5.8e-196 688.0 503 66.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.9e-195 685.6 457 68.9
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.1e-194 683.7 493 66.7
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 1.1e-194 683.7 493 66.9
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.1e-194 683.7 493 66.7
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 3.2e-194 682.2 459 70.6
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 7.1e-194 681.0 489 65.8
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.3e-190 670.2 484 66.5
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 2.1e-190 669.5 509 63.1
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 2.4e-189 666.0 496 64.9
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 5.8e-188 661.4 542 62.0
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.9e-187 658.3 486 65.6
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 1.5e-180 636.7 481 64.9
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 2.6e-164 582.8 477 56.6
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 4.5e-156 555.4 379 69.1
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 7.0e-149 531.6 370 68.4
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 1.3e-139 500.7 351 65.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 4.7e-137 492.3 342 67.3
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.6e-129 467.2 332 63.9
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.9e-110 403.3 492 45.7
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 4.1e-109 399.4 282 64.2
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.0e-107 393.3 292 61.3
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 8.4e-94 348.6 231 65.8
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 3.8e-86 323.2 214 65.9
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 4.5e-71 273.1 183 69.4
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.2e-69 266.9 176 72.2
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 2.8e-57 227.3 141 76.6
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 1.5e-55 221.5 148 65.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 1.5e-21 108.6 104 53.8
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 9.2e-16 89.4 51 74.5
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 1.5e-10 72.0 79 44.3
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.8e-10 70.1 101 40.6


User provided reference genes

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