Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.4e-58 229.9 167 100.0
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 3.5e-54 215.3 167 85.0
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.6e-51 206.5 167 88.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 5.8e-49 198.0 167 86.2
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 3.7e-43 178.7 191 78.0
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 4.8e-43 178.3 166 83.1
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 1.8e-42 176.4 109 83.5
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 2.4e-42 176.0 167 79.0
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 1.0e-40 170.6 108 81.5
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.0e-40 168.3 108 81.5
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.6e-38 163.3 108 79.6
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 4.3e-36 155.2 103 79.6
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 4.3e-36 155.2 107 75.7
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 1.7e-35 153.3 110 73.6
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 2.2e-35 152.9 105 77.1
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 6.3e-35 151.4 102 76.5
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 1.4e-34 150.2 102 75.5
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.8e-34 149.8 102 75.5
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 3.1e-34 149.1 108 75.0
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 3.1e-34 149.1 103 76.7
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.2e-33 147.1 106 73.6
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 1.5e-33 146.7 109 71.6
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 2.0e-33 146.4 109 73.4
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 3.4e-33 145.6 109 71.6
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 4.5e-33 145.2 108 72.2
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.9e-33 144.8 106 71.7
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.9e-33 144.8 106 71.7
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 7.7e-33 144.4 167 64.1
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 1.0e-32 144.1 105 71.4
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.3e-32 143.7 106 73.6
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 5.0e-32 141.7 110 71.8
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 6.5e-32 141.4 103 68.0
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.1e-31 140.6 104 70.2
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 1.1e-31 140.6 102 69.6
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.9e-31 139.8 160 66.2
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 5.5e-31 138.3 103 71.8
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 5.5e-31 138.3 111 69.4
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 5.5e-31 138.3 105 69.5
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 9.4e-31 137.5 100 75.0
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.2e-30 137.1 103 67.0
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.6e-30 136.7 103 70.9
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.6e-30 136.7 103 70.9
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.6e-30 136.7 103 70.9
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.6e-30 136.7 102 70.6
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.6e-30 136.7 103 69.9
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.6e-30 136.7 104 71.2
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.6e-30 136.7 103 67.0
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.7e-30 136.0 108 70.4
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 2.7e-30 136.0 102 73.5
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 3.6e-30 135.6 107 68.2
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 3.6e-30 135.6 109 69.7
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 4.7e-30 135.2 102 68.6
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 6.1e-30 134.8 101 74.3
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 6.1e-30 134.8 103 69.9
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 6.1e-30 134.8 103 69.9
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 1.0e-29 134.0 102 72.5
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.0e-29 134.0 102 70.6
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.4e-29 133.7 108 65.7
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.3e-29 132.9 104 66.3
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.0e-29 132.5 101 74.3
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 3.0e-29 132.5 111 64.9
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 3.0e-29 132.5 103 67.0
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 3.9e-29 132.1 102 71.6
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 3.9e-29 132.1 102 71.6
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 6.7e-29 131.3 101 73.3
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 6.7e-29 131.3 101 71.3
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 8.8e-29 131.0 102 71.6
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 8.8e-29 131.0 102 70.6
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 8.8e-29 131.0 102 70.6
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 8.8e-29 131.0 104 69.2
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.5e-28 130.2 101 71.3
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 1.5e-28 130.2 105 66.7
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 2.0e-28 129.8 103 67.0
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.3e-28 129.0 101 67.3
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.3e-28 129.0 101 67.3
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 3.3e-28 129.0 101 68.3
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 7.4e-28 127.9 105 66.7
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 7.4e-28 127.9 102 67.6
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.2e-27 126.3 105 66.7
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.8e-27 125.9 101 66.3
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.8e-27 125.9 101 67.3
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 3.7e-27 125.6 113 66.4
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 4.8e-27 125.2 106 67.9
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.8e-27 125.2 99 68.7
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.8e-27 125.2 99 68.7
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 6.3e-27 124.8 105 65.7
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 6.3e-27 124.8 127 55.1
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 8.2e-27 124.4 99 66.7
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.8e-26 123.2 105 67.6
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 2.4e-26 122.9 101 66.3
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.1e-26 122.1 103 68.0
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.5e-25 120.2 81 79.0
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 3.4e-25 119.0 84 75.0
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 5.9e-25 118.2 86 73.3
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 7.7e-25 117.9 86 69.8
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.0e-24 117.5 84 73.8
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 5.0e-24 115.2 100 62.0
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 4.2e-23 112.1 105 55.2
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 5.5e-23 111.7 106 59.4
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 7.2e-23 111.3 124 52.4
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 2.1e-22 109.8 85 67.1
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.0e-21 105.9 107 58.9
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 6.7e-21 104.8 110 59.1
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 3.3e-20 102.4 78 73.1
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 3.3e-20 102.4 108 55.6
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 7.4e-20 101.3 112 54.5
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.4e-18 96.3 72 68.1
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.3e-16 90.5 89 62.9
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.2e-16 89.7 114 50.9
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.9e-15 86.7 87 55.2
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 8.0e-14 81.3 54 70.4
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 4.0e-13 79.0 63 68.3
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.0e-13 79.0 108 49.1
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 5.7e-12 75.1 105 42.9
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 2.8e-11 72.8 98 44.9
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 6.3e-11 71.6 42 81.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 6.3e-11 71.6 42 81.0


User provided reference genes

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