Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1309G1454 Vigna mungo HOM05D000982 ORTHO05D000784 1.6e-62 242.7 127 100.0
Phvul.009G188800 Phaseolus vulgaris HOM05D000982 ORTHO05D000784 3.3e-28 128.6 93 76.3
Glyma.06G192300 Glycine max HOM05D000982 ORTHO05D000784 4.5e-25 118.2 90 68.9
Glyma.04G171600 Glycine max HOM05D000982 ORTHO05D000784 1.2e-22 110.2 91 67.0
Lj1g0009727 Lotus japonicus HOM05D000982 ORTHO05D000784 1.1e-15 87.0 89 55.1
Glyma.08G356900 Glycine max HOM05D000982 ORTHO05D000784 1.6e-14 83.2 91 52.7
Phvul.008G122600 Phaseolus vulgaris HOM05D000982 ORTHO05D000784 3.6e-14 82.0 90 52.2
arahy.Tifrunner.gnm1.ann1.LQAU3W Arachis hypogaea HOM05D000982 ORTHO05D000784 4.6e-14 81.6 95 52.6
arahy.Tifrunner.gnm1.ann1.X18BMS Arachis hypogaea HOM05D000982 ORTHO05D000784 8.8e-13 77.4 91 51.6
Lalb_Chr01g0022471 Lupinus albus HOM05D000982 ORTHO05D000784 8.8e-13 77.4 91 50.5
arahy.Tifrunner.gnm1.ann1.K0LJPP Arachis hypogaea HOM05D000982 ORTHO05D000784 1.5e-12 76.6 91 51.6
TAR371G0366 Trochodendron aralioides HOM05D000982 ORTHO05D000784 1.9e-12 76.3 86 50.0
arahy.Tifrunner.gnm1.ann1.F2Y5QJ Arachis hypogaea HOM05D000982 ORTHO05D000784 2.5e-12 75.9 95 50.5
MD14G1197600 Malus domestica HOM05D000982 ORTHO05D000784 5.7e-12 74.7 94 46.8
Medtr7g059260 Medicago truncatula HOM05D000982 ORTHO05D000784 7.4e-12 74.3 91 46.2
Manes.14G076600 Manihot esculenta HOM05D000982 ORTHO05D000784 9.7e-12 73.9 92 48.9
TPR.G23254 Trifolium pratense HOM05D000982 ORTHO05D000784 1.7e-11 73.2 91 48.4
QL10p016274 Quercus lobata HOM05D000982 ORTHO05D000784 2.2e-11 72.8 83 48.2
Psat3g143280 Pisum sativum HOM05D000982 ORTHO05D000784 4.8e-11 71.6 91 46.2
Lalb_Chr03g0041941 Lupinus albus HOM05D000982 ORTHO05D000784 6.3e-11 71.2 91 47.3
Actinidia19046 Actinidia chinensis HOM05D000982 ORTHO05D000784 1.4e-10 70.1 87 44.8
MD00G1186500 Malus domestica HOM05D000982 ORTHO05D000784 1.4e-10 70.1 90 44.4
Oeu006491.1 Olea europaea HOM05D000982 ORTHO05D000784 1.4e-10 70.1 85 47.1
CAN.G1305.12 Capsicum annuum HOM05D000982 ORTHO05D000784 2.4e-10 69.3 91 44.0
Dinv19940 Davidia involucrata HOM05D000982 ORTHO05D000784 4.1e-10 68.6 81 48.1
MSTRG.4416 Avicennia marina HOM05D000982 ORTHO05D000784 5.3e-10 68.2 87 42.5
Dinv38688 Davidia involucrata HOM05D000982 ORTHO05D000784 9.1e-10 67.4 91 46.2
Eucgr.K02466 Eucalyptus grandis HOM05D000982 ORTHO05D000784 1.2e-09 67.0 86 43.0
MD06G1190900 Malus domestica HOM05D000982 ORTHO05D000784 2.6e-09 65.9 78 44.9
Prupe.5G189600 Prunus persica HOM05D000982 ORTHO05D000784 2.6e-09 65.9 91 42.9
Duzib084G0136 Durio zibethinus HOM05D000982 ORTHO05D000784 5.9e-09 64.7 82 43.9
Migut.D01841 Erythranthe guttata HOM05D000982 ORTHO05D000784 5.9e-09 64.7 89 41.6
Actinidia34989 Actinidia chinensis HOM05D000982 ORTHO05D000784 7.7e-09 64.3 88 44.3
CDE02G0872 Ceratophyllum demersum HOM05D000982 ORTHO05D000784 7.7e-09 64.3 90 40.0
Oeu060792.1 Olea europaea HOM05D000982 ORTHO05D000784 7.7e-09 64.3 84 44.0
GSVIVG01008030001 Vitis vinifera HOM05D000982 ORTHO05D000784 7.7e-09 64.3 87 43.7
PSO017G6707 Papaver somniferum HOM05D000982 ORTHO05D000784 1.0e-08 63.9 97 41.2
PSO017G0397 Papaver somniferum HOM05D000982 ORTHO05D000784 1.3e-08 63.5 92 40.2
Thecc.03G083300 Theobroma cacao HOM05D000982 ORTHO05D000784 1.3e-08 63.5 90 42.2
Gohir.D12G179220 Gossypium hirsutum HOM05D000982 ORTHO05D000784 1.7e-08 63.2 82 42.7
Gorai.008G192000 Gossypium raimondii HOM05D000982 ORTHO05D000784 1.7e-08 63.2 82 42.7
Duzib068G1204 Durio zibethinus HOM05D000982 ORTHO05D000784 2.2e-08 62.8 90 38.9
Duzib084G0153 Durio zibethinus HOM05D000982 ORTHO05D000784 2.2e-08 62.8 90 40.0
Ciclev10024517m.g Citrus clementina HOM05D000982 ORTHO05D000784 2.9e-08 62.4 93 40.9
PSO478G2165 Papaver somniferum HOM05D000982 ORTHO05D000784 2.9e-08 62.4 92 39.1
COL.COLO4_07693 Corchorus olitorius HOM05D000982 ORTHO05D000784 3.8e-08 62.0 90 38.9
Atru.chr9.2282 Acer truncatum HOM05D000982 ORTHO05D000784 5.0e-08 61.6 75 45.3
CDE09G0480 Ceratophyllum demersum HOM05D000982 ORTHO05D000784 6.5e-08 61.2 85 37.6
FAN08G0869 Fragaria x ananassa HOM05D000982 ORTHO05D000784 6.5e-08 61.2 86 43.0
Peaxi162Scf00267g00138 Petunia axillaris HOM05D000982 ORTHO05D000784 8.5e-08 60.8 90 41.1
MBI02_g18321_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 1.1e-07 60.5 88 38.6
MBI02_g33379_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 1.1e-07 60.5 88 38.6
MBI02_g41890_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 1.1e-07 60.5 89 40.4
Manes.06G094500 Manihot esculenta HOM05D000982 ORTHO05D000784 1.1e-07 60.5 81 42.0
Duzib084G0198 Durio zibethinus HOM05D000982 ORTHO05D000784 1.4e-07 60.1 90 40.0
FvH4_5g15220 Fragaria vesca HOM05D000982 ORTHO05D000784 1.4e-07 60.1 86 43.0
FAN18G3587 Fragaria x ananassa HOM05D000982 ORTHO05D000784 1.4e-07 60.1 86 43.0
MBI02_g46986_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 1.4e-07 60.1 89 40.4
PGR044G0948 Punica granatum HOM05D000982 ORTHO05D000784 1.4e-07 60.1 88 37.5
Gohir.A12G176300 Gossypium hirsutum HOM05D000982 ORTHO05D000784 1.9e-07 59.7 82 41.5
Nitab4.5_0000984g0070 Nicotiana tabacum HOM05D000982 ORTHO05D000784 1.9e-07 59.7 81 42.0
RcHm_v2.0_Chr7g0180941 Rosa chinensis HOM05D000982 ORTHO05D000784 1.9e-07 59.7 92 42.4
HPP92_002345 Vanilla planifolia HOM05D000982 ORTHO05D000784 1.9e-07 59.7 84 38.1
FAN13G1768 Fragaria x ananassa HOM05D000982 ORTHO05D000784 2.5e-07 59.3 86 43.0
Gorai.007G036300 Gossypium raimondii HOM05D000982 ORTHO05D000784 2.5e-07 59.3 90 37.8
FAN04G1666 Fragaria x ananassa HOM05D000982 ORTHO05D000784 3.2e-07 58.9 86 43.0
Lsat_1_v5_gn_5_18801 Lactuca sativa HOM05D000982 ORTHO05D000784 3.2e-07 58.9 90 37.8
Nitab4.5_0000785g0050 Nicotiana tabacum HOM05D000982 ORTHO05D000784 3.2e-07 58.9 91 41.8
DCAR_026040 Daucus carota HOM05D000982 ORTHO05D000784 4.2e-07 58.5 87 37.9
Gohir.A11G030161 Gossypium hirsutum HOM05D000982 ORTHO05D000784 4.2e-07 58.5 90 37.8
TWI15G0082 Tripterygium wilfordii HOM05D000982 ORTHO05D000784 4.2e-07 58.5 89 39.3
vmacro16557 Vaccinium macrocarpon HOM05D000982 ORTHO05D000784 4.2e-07 58.5 81 40.7
AUR62008383 Chenopodium quinoa HOM05D000982 ORTHO05D000784 7.2e-07 57.8 91 41.8
ECA246G3585 Erigeron canadensis HOM05D000982 ORTHO05D000784 7.2e-07 57.8 86 37.2
Peaxi162Scf00009g00111 Petunia axillaris HOM05D000982 ORTHO05D000784 7.2e-07 57.8 94 42.6
Cc04_g17060 Coffea canephora HOM05D000982 ORTHO05D000784 1.2e-06 57.0 85 40.0
Gohir.D11G033500 Gossypium hirsutum HOM05D000982 ORTHO05D000784 1.2e-06 57.0 90 36.7
MBI02_g41891_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 1.6e-06 56.6 89 38.2
Aqoxy3G00702 Aquilegia oxysepala HOM05D000982 ORTHO05D000784 2.1e-06 56.2 86 33.7
ECA246G2914 Erigeron canadensis HOM05D000982 ORTHO05D000784 2.1e-06 56.2 89 36.0
Sopen03g032060 Solanum pennellii HOM05D000982 ORTHO05D000784 2.1e-06 56.2 90 36.7
HPP92_011242 Vanilla planifolia HOM05D000982 ORTHO05D000784 2.1e-06 56.2 90 38.9
Zm00001eb372510 Zea mays HOM05D000982 ORTHO05D000784 2.1e-06 56.2 86 37.2
ATR0564G377 Amborella trichopoda HOM05D000982 ORTHO05D000784 2.7e-06 55.8 88 35.2
Nn3g17190 Nelumbo nucifera HOM05D000982 ORTHO05D000784 2.7e-06 55.8 116 33.6
THA.LOC104813879 Tarenaya hassleriana HOM05D000982 ORTHO05D000784 2.7e-06 55.8 91 37.4
Zm00001eb254900 Zea mays HOM05D000982 ORTHO05D000784 2.7e-06 55.8 90 34.4
Nn3g17177 Nelumbo nucifera HOM05D000982 ORTHO05D000784 3.6e-06 55.5 88 36.4
Aa31LG4G4760 Aethionema arabicum HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 40.6
BcaB02g06955 Brassica carinata HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 41.7
A07p29380 Brassica napus HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 41.7
C06p33260 Brassica napus HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 41.7
BolC6t38440H Brassica oleracea HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 41.7
BraA07t30575Z Brassica rapa HOM05D000982 ORTHO05D000784 4.7e-06 55.1 96 41.7
CiPaw.11G042100 Carya illinoinensis HOM05D000982 ORTHO05D000784 4.7e-06 55.1 94 41.5
Os10g0404300 Oryza sativa ssp. japonica HOM05D000982 ORTHO05D000784 4.7e-06 55.1 92 39.1
MBI02_g14491_MAGBIO Magnolia biondii HOM05D000982 ORTHO05D000784 6.1e-06 54.7 88 37.5
Os06g0226500 Oryza sativa ssp. japonica HOM05D000982 ORTHO05D000784 6.1e-06 54.7 90 36.7
PSO063G7435 Papaver somniferum HOM05D000982 ORTHO05D000784 6.1e-06 54.7 88 35.2
PSO832G3343 Papaver somniferum HOM05D000982 ORTHO05D000784 6.1e-06 54.7 88 35.2
AT1G74500 Arabidopsis thaliana HOM05D000982 ORTHO05D000784 7.9e-06 54.3 85 41.2
BcaC08g46881 Brassica carinata HOM05D000982 ORTHO05D000784 7.9e-06 54.3 92 40.2
C06p48660 Brassica napus HOM05D000982 ORTHO05D000784 7.9e-06 54.3 92 40.2
DCAR_026065 Daucus carota HOM05D000982 ORTHO05D000784 7.9e-06 54.3 96 36.5
HanXRQChr04g0127551 Helianthus annuus HOM05D000982 ORTHO05D000784 7.9e-06 54.3 85 35.3
Os02g0747900 Oryza sativa ssp. japonica HOM05D000982 ORTHO05D000784 7.9e-06 54.3 90 35.6
HPP92_013070 Vanilla planifolia HOM05D000982 ORTHO05D000784 7.9e-06 54.3 78 41.0


User provided reference genes

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