Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 5.7e-74 280.8 138 100.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.4e-56 223.0 116 90.5
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 4.2e-53 211.5 116 84.5
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.2e-52 209.9 117 82.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.1e-52 209.1 117 82.1
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 3.0e-51 205.3 117 81.2
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 5.7e-50 201.1 116 81.9
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 9.7e-50 200.3 116 82.8
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.3e-49 199.9 116 79.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.3e-49 199.9 116 79.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.1e-48 196.8 114 78.1
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.8e-48 196.1 116 79.3
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.4e-48 195.7 114 78.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.5e-45 186.4 117 72.6
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 4.2e-45 184.9 116 72.4
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 5.5e-45 184.5 115 73.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.2e-44 183.3 116 71.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.6e-44 183.0 124 70.2
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.6e-44 183.0 117 71.8
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.1e-44 182.6 117 70.1
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.6e-44 181.8 116 73.3
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 8.0e-44 180.6 116 70.7
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 8.0e-44 180.6 116 70.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.0e-43 180.3 120 70.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.4e-43 179.9 116 70.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.8e-43 179.5 110 75.5
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.3e-43 179.1 116 69.8
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.3e-43 179.1 116 70.7
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.3e-43 179.1 116 72.4
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.3e-43 179.1 116 71.6
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.0e-43 178.7 116 69.8
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.0e-43 178.3 124 66.1
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 6.8e-43 177.6 116 69.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 8.8e-43 177.2 118 69.5
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.5e-42 176.4 124 69.4
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.0e-42 176.0 116 69.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.0e-42 176.0 116 69.0
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.0e-42 176.0 116 69.0
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.0e-42 176.0 113 71.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.6e-42 175.6 117 66.7
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.6e-42 175.6 117 66.7
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.4e-42 174.9 116 70.7
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 5.7e-42 174.5 116 67.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 9.8e-42 173.7 122 68.0
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 9.8e-42 173.7 122 68.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.3e-41 173.3 133 63.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.3e-41 173.3 122 68.0
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.7e-41 172.9 123 67.5
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.7e-41 172.9 119 66.4
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 2.8e-41 172.2 124 67.7
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.8e-41 172.2 116 68.1
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 3.7e-41 171.8 117 65.0
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 3.7e-41 171.8 114 69.3
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 3.7e-41 171.8 114 69.3
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 8.3e-41 170.6 133 60.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.8e-40 169.5 116 66.4
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.4e-40 169.1 116 65.5
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.4e-40 169.1 124 66.1
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.1e-40 168.7 122 64.8
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.4e-40 167.9 116 64.7
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 5.4e-40 167.9 117 66.7
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.6e-39 166.4 117 64.1
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.6e-39 166.4 125 65.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.0e-39 166.0 130 60.8
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.7e-39 165.6 125 64.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.7e-39 165.6 117 65.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.5e-39 165.2 116 63.8
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 4.5e-39 164.9 117 64.1
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 4.5e-39 164.9 118 65.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 4.5e-39 164.9 113 63.7
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 4.5e-39 164.9 114 68.4
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 4.5e-39 164.9 116 63.8
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 5.9e-39 164.5 134 59.7
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.0e-38 163.7 118 62.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.0e-38 163.7 116 64.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.7e-38 162.9 118 67.8
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.9e-38 162.2 117 63.2
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.8e-38 161.8 115 64.3
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 5.0e-38 161.4 117 62.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 5.0e-38 161.4 117 63.2
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 5.0e-38 161.4 117 62.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 5.0e-38 161.4 124 62.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 8.5e-38 160.6 136 60.3
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 8.5e-38 160.6 117 62.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 8.5e-38 160.6 118 65.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.5e-38 160.6 117 65.0
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.1e-37 160.2 118 66.1
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 3.2e-37 158.7 119 63.0
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.2e-37 158.7 131 58.8
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 5.5e-37 157.9 119 62.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.2e-36 156.8 119 62.2
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.6e-36 156.4 115 63.5
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-36 156.4 118 62.7
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 2.1e-36 156.0 128 60.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.7e-36 155.6 128 60.2
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 4.7e-36 154.8 121 61.2
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.1e-36 154.5 118 61.0
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 8.0e-36 154.1 116 62.9
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 1.0e-35 153.7 118 61.0
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.4e-35 153.3 119 63.0
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.2e-35 151.4 117 63.2
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 6.8e-35 151.0 119 62.2
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.4e-34 148.7 124 62.1
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.4e-34 148.3 119 58.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 4.4e-34 148.3 113 61.1
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.8e-33 145.6 120 61.7
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 4.9e-33 144.8 90 68.9
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 6.3e-33 144.4 117 60.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.4e-32 142.5 110 60.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 5.4e-32 141.4 119 58.8
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.6e-31 139.8 95 68.4
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.5e-31 138.7 118 53.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.5e-31 138.3 123 52.8
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.0e-30 137.1 114 55.3
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.0e-30 137.1 118 55.1
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.3e-30 136.0 109 60.6
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.9e-30 135.6 117 52.1
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 3.8e-30 135.2 91 69.2
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.8e-30 135.2 121 52.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 3.8e-30 135.2 88 69.3
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.2e-29 131.0 97 63.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.8e-28 129.0 89 64.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.0e-26 122.9 86 66.3
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 7.5e-26 120.9 125 48.0
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.7e-25 118.6 116 50.0
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.0e-23 112.8 87 57.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.3e-21 105.1 69 63.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.0e-18 96.3 66 66.7
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.3e-14 82.8 87 54.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.1e-12 76.3 82 48.8
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.4e-11 73.6 53 60.4
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 5.1e-06 55.1 58 46.6


User provided reference genes

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