Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 6.0e-129 464.2 230 100.0
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 2.3e-120 435.6 230 92.6
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.6e-108 395.6 230 83.0
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.5e-100 369.8 230 76.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 3.4e-100 368.6 230 76.1
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.1e-98 363.6 230 77.4
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 7.2e-98 360.9 227 76.7
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 5.7e-95 351.3 231 73.6
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.1e-93 347.1 219 74.4
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 2.9e-91 339.0 225 68.9
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 3.2e-90 335.5 231 68.0
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 3.2e-90 335.5 230 67.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 4.2e-90 335.1 230 68.3
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 5.5e-90 334.7 222 67.6
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.1e-89 332.8 229 65.1
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.1e-89 332.8 225 65.3
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 2.7e-89 332.4 221 68.3
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.6e-89 332.0 225 64.9
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 8.0e-89 330.9 221 67.4
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.0e-88 330.5 219 68.9
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.0e-88 330.5 227 68.3
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.4e-88 330.1 230 65.7
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.8e-88 329.7 224 67.9
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.8e-88 329.7 218 67.4
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.0e-88 328.9 217 66.4
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 8.8e-88 327.4 231 67.1
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.1e-87 327.0 219 66.2
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 9.7e-87 323.9 232 64.7
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.2e-86 322.8 218 68.3
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.8e-86 322.4 223 66.8
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 3.7e-86 322.0 240 64.6
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.3e-86 321.2 219 65.3
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 6.3e-86 321.2 220 70.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.4e-85 320.1 219 68.9
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.8e-85 319.7 222 66.2
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 1.8e-85 319.7 218 67.4
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.6e-84 316.6 217 67.3
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 2.6e-84 315.8 216 64.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 2.6e-84 315.8 215 66.5
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 4.5e-84 315.1 225 68.9
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 4.5e-84 315.1 212 67.5
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 5.9e-84 314.7 219 64.4
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.0e-83 313.9 220 65.5
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 1.0e-83 313.9 223 65.9
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.0e-83 313.9 227 64.3
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.3e-83 313.5 214 66.4
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.7e-83 313.2 218 64.7
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.7e-83 313.2 214 67.3
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.8e-83 312.0 216 63.4
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 6.5e-83 311.2 228 63.2
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 3.2e-82 308.9 226 64.2
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 9.4e-82 307.4 225 64.0
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.2e-81 307.0 238 61.3
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.6e-81 306.6 218 64.7
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 2.1e-81 306.2 215 64.7
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 8.0e-81 304.3 217 63.6
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.4e-80 303.5 229 62.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.8e-80 303.1 212 66.0
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 2.3e-80 302.8 220 65.0
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 2.3e-80 302.8 226 61.5
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 5.2e-80 301.6 204 69.1
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.2e-79 300.4 195 70.8
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 1.2e-79 300.4 225 61.3
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 1.3e-78 297.0 213 63.4
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 6.3e-78 294.7 221 62.0
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 6.3e-78 294.7 226 61.1
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.4e-77 292.7 221 61.1
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.4e-77 292.7 221 61.1
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.4e-77 292.7 221 61.1
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 4.1e-77 292.0 221 60.6
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 9.1e-77 290.8 221 60.2
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.0e-76 289.7 221 60.6
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 2.0e-76 289.7 215 60.0
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 2.7e-76 289.3 221 60.2
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 7.7e-76 287.7 218 61.0
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 7.7e-76 287.7 224 58.5
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.3e-75 287.0 218 61.0
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 8.5e-75 284.3 209 63.2
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.9e-74 283.1 218 59.6
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 3.2e-74 282.3 226 58.0
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 5.5e-74 281.6 284 48.2
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 9.4e-74 280.8 211 62.1
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.6e-73 280.0 222 57.7
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.4e-72 276.9 214 58.9
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 6.8e-72 274.6 198 62.6
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.0e-71 273.1 211 59.7
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 2.6e-71 272.7 209 59.8
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 5.7e-71 271.6 177 67.8
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.4e-69 266.2 227 55.5
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 4.1e-69 265.4 221 57.5
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 4.5e-68 261.9 220 55.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.3e-67 260.4 208 55.8
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 9.5e-66 254.2 215 54.4
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 4.7e-65 251.9 208 54.8
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 2.6e-63 246.1 176 63.6
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 3.4e-63 245.7 249 49.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 9.8e-63 244.2 228 53.1
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 9.8e-63 244.2 210 55.7
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.3e-62 243.8 176 64.8
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.8e-62 242.7 177 63.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.7e-60 236.1 157 69.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 7.8e-60 234.6 160 70.0
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.3e-58 228.0 234 50.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 2.3e-56 223.0 238 48.7
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.3e-56 223.0 174 56.9
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 8.9e-56 221.1 218 50.0
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.2e-55 220.7 213 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 8.3e-54 214.5 213 49.8
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.7e-52 209.5 212 49.1
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.9e-51 205.7 218 44.0
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 4.7e-49 198.7 141 66.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 6.2e-49 198.4 214 43.0
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 2.3e-48 196.4 208 46.6
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 9.8e-47 191.0 166 56.6
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.1e-45 187.6 157 56.7
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.6e-41 172.6 112 68.8
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.1e-40 169.5 161 54.7
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 7.1e-37 158.3 134 62.7
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.5e-26 124.0 82 65.9
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.3e-25 120.9 220 30.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.6e-20 104.0 221 29.9
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 4.6e-20 102.4 94 52.1
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 1.4e-13 80.9 91 45.1
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 3.5e-12 76.3 54 64.8
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 1.0e-11 74.7 54 61.1
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 1.3e-11 74.3 54 59.3
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 4.3e-10 69.3 119 31.1
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 9.0e-08 61.6 43 53.5


User provided reference genes

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