Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2912 Vigna mungo HOM05D009242 ORTHO05D011305 8.4e-54 213.4 104 100.0
Phvul.002G030100 Phaseolus vulgaris HOM05D009242 ORTHO05D011305 7.9e-44 180.3 104 86.5
Glyma.01G175800 Glycine max HOM05D009242 ORTHO05D011305 3.8e-38 161.4 110 75.5
Glyma.11G068100 Glycine max HOM05D009242 ORTHO05D011305 4.2e-37 157.9 109 74.3
Medtr5g020090 Medicago truncatula HOM05D009242 ORTHO05D011305 1.9e-29 132.5 108 67.6
Ca_24845_v3 Cicer arietinum L. HOM05D009242 ORTHO05D011305 2.8e-25 118.6 105 64.8
Medtr5g020110 Medicago truncatula HOM05D009242 ORTHO05D011305 3.1e-24 115.2 108 59.3
TPR.G22291 Trifolium pratense HOM05D009242 ORTHO05D011305 1.5e-23 112.8 104 61.5
Lj2g0022231 Lotus japonicus HOM05D009242 ORTHO05D011305 7.6e-23 110.5 114 59.6
Psat2g159760 Pisum sativum HOM05D009242 ORTHO05D011305 2.9e-22 108.6 109 57.8
Lalb_Chr05g0212791 Lupinus albus HOM05D009242 ORTHO05D011305 4.2e-21 104.8 106 58.5
Cfa004304 Carpinus fangiana HOM05D009242 ORTHO05D011305 2.5e-18 95.5 105 52.4
Haze_15093 Corylus avellana HOM05D009242 ORTHO05D011305 4.8e-17 91.3 104 51.0
CiPaw.01G037600 Carya illinoinensis HOM05D009242 ORTHO05D011305 6.3e-17 90.9 116 50.9
Potri.007G026000 Populus trichocarpa HOM05D009242 ORTHO05D011305 1.9e-13 79.3 115 40.9
Sc07g0000420 Simmondsia chinensis HOM05D009242 ORTHO05D011305 1.4e-11 73.2 121 43.0
Dinv39982 Davidia involucrata HOM05D009242 ORTHO05D011305 3.3e-10 68.6 106 39.6
QL06p045968 Quercus lobata HOM05D009242 ORTHO05D011305 3.3e-10 68.6 118 40.7
QL06p045982 Quercus lobata HOM05D009242 ORTHO05D011305 3.3e-10 68.6 118 40.7
QL08p007142 Quercus lobata HOM05D009242 ORTHO05D011305 3.3e-10 68.6 118 40.7
Aqoxy6G01102 Aquilegia oxysepala HOM05D009242 ORTHO05D011305 6.3e-09 64.3 111 37.8
Cc07_g09490 Coffea canephora HOM05D009242 ORTHO05D011305 8.2e-09 63.9 110 42.7
Sabra07G0023000 Salix brachista HOM05D009242 ORTHO05D011305 5.3e-08 61.2 89 42.7
COL.COLO4_22085 Corchorus olitorius HOM05D009242 ORTHO05D011305 1.0e-06 57.0 115 29.6
Nn1g04998 Nelumbo nucifera HOM05D009242 ORTHO05D011305 1.3e-06 56.6 106 34.9
SalBow5G0014 Salvia bowleyana HOM05D009242 ORTHO05D011305 1.7e-06 56.2 107 37.4
DCAR_000730 Daucus carota HOM05D009242 ORTHO05D011305 6.5e-06 54.3 114 36.8


User provided reference genes

Program Settings