Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 1.6e-219 766.1 486 100.0
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.3e-173 613.6 427 83.4
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 1.5e-169 600.1 426 76.3
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 1.5e-153 547.0 428 72.4
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 7.4e-137 491.5 456 62.7
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 3.5e-134 482.6 429 65.0
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 3.6e-123 446.0 436 61.5
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 5.9e-118 428.7 440 61.4
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 3.8e-117 426.0 438 59.8
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 2.8e-112 409.8 437 56.1
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 7.0e-111 405.2 448 56.2
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.5e-110 402.9 452 54.4
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 1.3e-109 401.0 452 54.2
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.3e-109 401.0 452 54.2
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 2.3e-109 400.2 463 53.3
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.3e-109 400.2 442 56.3
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.1e-108 397.9 454 56.6
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 6.8e-106 388.7 456 55.0
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.6e-105 386.7 453 55.4
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 3.4e-105 386.3 446 54.9
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 1.3e-104 384.4 462 53.2
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 2.9e-104 383.3 469 53.3
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 3.7e-104 382.9 440 54.5
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 3.7e-104 382.9 452 54.9
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 6.4e-104 382.1 469 52.2
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 1.2e-102 377.9 458 53.7
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 2.7e-102 376.7 460 52.4
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 2.7e-102 376.7 463 51.6
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 4.6e-102 375.9 456 57.0
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 5.9e-102 375.6 464 53.4
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 1.0e-101 374.8 495 49.5
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.3e-101 374.4 484 49.4
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 3.9e-101 372.9 455 51.6
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 5.0e-101 372.5 472 53.8
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 5.0e-101 372.5 463 52.5
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 7.3e-100 368.6 471 51.4
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 8.0e-99 365.2 467 51.8
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 4.0e-98 362.8 467 51.4
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 6.8e-98 362.1 461 53.1
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 2.0e-97 360.5 454 52.2
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.6e-97 360.1 292 68.5
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 9.8e-97 358.2 446 52.5
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 1.7e-96 357.5 462 51.5
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 2.2e-96 357.1 439 55.4
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.2e-96 357.1 472 50.4
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 3.7e-96 356.3 453 51.2
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-95 354.8 458 51.3
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 1.4e-95 354.4 455 51.0
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 5.4e-95 352.4 442 49.3
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 1.2e-94 351.3 464 51.5
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 1.6e-94 350.9 447 51.2
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 1.6e-94 350.9 473 51.0
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 1.6e-94 350.9 463 50.3
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 7.8e-94 348.6 442 50.9
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.3e-93 347.8 464 50.0
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.9e-93 346.3 435 51.3
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 6.6e-93 345.5 506 47.8
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.6e-93 345.1 435 51.3
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 8.6e-93 345.1 466 49.1
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-92 344.7 459 50.1
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 1.5e-92 344.4 504 46.6
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 1.9e-92 344.0 453 51.4
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 5.6e-92 342.4 480 49.2
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 9.5e-92 341.7 463 52.1
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 9.5e-92 341.7 482 48.8
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 4.7e-91 339.3 463 52.1
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 3.1e-90 336.7 453 50.8
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 5.2e-90 335.9 455 47.3
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 6.8e-90 335.5 442 50.7
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 6.8e-90 335.5 452 52.0
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.2e-89 334.7 459 48.8
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 2.0e-89 334.0 472 49.4
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 3.4e-89 333.2 447 49.7
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 7.5e-89 332.0 452 51.8
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 1.7e-88 330.9 463 47.5
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 2.2e-88 330.5 446 49.1
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 4.9e-88 329.3 457 53.6
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.9e-87 327.4 442 50.0
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 4.1e-87 326.2 375 54.7
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 4.1e-87 326.2 454 50.0
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 1.0e-85 321.6 446 47.5
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 3.0e-85 320.1 428 49.3
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.5e-84 317.8 454 48.0
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 1.5e-84 317.8 448 49.6
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 2.1e-83 313.9 418 47.4
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 3.6e-83 313.2 403 51.1
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 8.1e-83 312.0 443 48.1
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.1e-82 311.6 462 50.9
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 3.1e-82 310.1 446 49.8
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 1.2e-81 308.1 443 47.6
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 1.5e-81 307.8 436 49.1
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 9.9e-81 305.1 419 47.7
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 2.9e-80 303.5 458 45.2
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 1.4e-79 301.2 432 47.7
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 3.2e-79 300.1 442 48.2
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 9.2e-79 298.5 439 47.6
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.9e-76 290.8 466 45.3
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 3.8e-72 276.6 502 43.8
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 8.4e-72 275.4 298 56.4
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 1.4e-71 274.6 443 43.8
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.3e-68 263.5 306 51.3
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.4e-66 258.1 435 43.4
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 4.2e-63 246.5 424 41.5
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 4.2e-63 246.5 284 54.9
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 3.7e-59 233.4 520 38.5
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 1.4e-58 231.5 352 44.3
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 5.8e-57 226.1 293 50.5
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.7e-56 224.6 324 47.5
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 1.1e-55 221.9 463 37.8
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 3.3e-52 210.3 155 69.0
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 7.4e-52 209.1 430 37.2
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 6.7e-37 159.5 417 34.8
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.5e-36 158.3 218 49.5
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 3.3e-36 157.1 446 33.2
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.0e-29 135.6 404 34.2
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 3.0e-29 134.0 123 61.0
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 5.1e-29 133.3 94 68.1
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 2.2e-27 127.9 431 32.0
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.3e-24 118.6 110 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 1.7e-24 118.2 299 36.1
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.9e-24 117.5 72 75.0
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 4.2e-23 113.6 104 63.5
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.7e-22 110.9 72 72.2
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 6.7e-21 106.3 116 55.2
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.0e-20 104.8 384 31.5
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 1.3e-19 102.1 170 38.8
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 1.1e-18 99.0 199 41.2
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.6e-17 94.4 87 58.6
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-12 78.6 93 38.7
FAN15G2853 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.7e-11 73.9 57 59.6
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 8.2e-11 72.8 85 38.8
Aa31LG2G20050 Aethionema arabicum HOM05D003946 ORTHO05D004485 1.6e-09 68.6 134 29.1
arahy.Tifrunner.gnm1.ann1.5R3BA8 Arachis hypogaea HOM05D003946 ORTHO05D004485 2.0e-09 68.2 128 30.5
arahy.Tifrunner.gnm1.ann1.8RX8VY Arachis hypogaea HOM05D003946 ORTHO05D004485 2.0e-09 68.2 128 30.5
PRCOL_00000793 Prasinoderma coloniale HOM05D002462 ORTHO05D007680 3.5e-09 67.4 139 28.8
arahy.Tifrunner.gnm1.ann1.69CB9U Arachis hypogaea HOM05D003946 ORTHO05D004485 4.5e-09 67.0 130 30.0
CDE02G3171 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 7.7e-09 66.2 125 26.4
Lj4g0012280 Lotus japonicus HOM05D003946 ORTHO05D004485 1.0e-08 65.9 128 30.5
CDE04G0594 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 2.2e-08 64.7 128 27.3
PSO210G1136 Papaver somniferum HOM05D003946 ORTHO05D004485 2.2e-08 64.7 123 30.1
PSO832G3676 Papaver somniferum HOM05D003946 ORTHO05D004485 2.2e-08 64.7 125 29.6
Phvul.008G125199 Phaseolus vulgaris HOM05D003946 ORTHO05D004485 2.9e-08 64.3 123 30.9
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 2.9e-08 64.3 130 29.2
TPR.G35554 Trifolium pratense HOM05D003946 ORTHO05D004485 5.0e-08 63.5 128 30.5
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 6.5e-08 63.2 123 29.3
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 6.5e-08 63.2 47 70.2
PSO782G1270 Papaver somniferum HOM05D003946 ORTHO05D004485 6.5e-08 63.2 123 27.6
TAR625G1091 Trochodendron aralioides HOM05D003946 ORTHO05D004485 6.5e-08 63.2 120 26.7
Gohir.D05G008000 Gossypium hirsutum HOM05D003946 ORTHO05D004485 8.5e-08 62.8 120 29.2
Gorai.009G008100 Gossypium raimondii HOM05D003946 ORTHO05D004485 8.5e-08 62.8 120 29.2
FAN21G2611 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.1e-07 62.4 122 29.5
VMungo1383G2940 Vigna mungo HOM05D003946 ORTHO05D004485 1.1e-07 62.4 123 30.1
Lj5A239G80 Lonicera japonica HOM05D001310 ORTHO05D001283 1.5e-07 62.0 141 29.8
Carub.0007s1011 Capsella rubella HOM05D003946 ORTHO05D004485 1.9e-07 61.6 134 26.1
Psat5g270480 Pisum sativum HOM05D003946 ORTHO05D004485 1.9e-07 61.6 128 28.1
BcaB06g27947 Brassica carinata HOM05D003946 ORTHO05D004485 2.5e-07 61.2 120 28.3
Ca_01517_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 2.5e-07 61.2 128 28.1
Medtr2g090135 Medicago truncatula HOM05D003946 ORTHO05D004485 2.5e-07 61.2 128 29.7
ECA234G2728 Erigeron canadensis HOM05D004005 ORTHO05D004876 4.2e-07 60.5 123 29.3
PSO063G3610 Papaver somniferum HOM05D003946 ORTHO05D004485 5.5e-07 60.1 123 27.6
Glyma.18G174600 Glycine max HOM05D003946 ORTHO05D004485 7.2e-07 59.7 123 29.3
Nitab4.5_0004556g0020 Nicotiana tabacum HOM05D001310 ORTHO05D001283 1.2e-06 58.9 122 32.8
THA.LOC104822478 Tarenaya hassleriana HOM05D000371 ORTHO05D001484 1.6e-06 58.5 130 28.5
TAR636G0475 Trochodendron aralioides HOM05D003946 ORTHO05D004485 1.6e-06 58.5 123 26.8
SalBow5G0105 Salvia bowleyana HOM05D001310 ORTHO05D001283 2.7e-06 57.8 132 31.8
PGR001G0003 Punica granatum HOM05D003946 ORTHO05D004485 4.7e-06 57.0 200 27.0
PGR044G0462 Punica granatum HOM05D003946 ORTHO05D004485 4.7e-06 57.0 200 27.0
CBR_g12383 Chara braunii HOM05D003946 ORTHO05D004485 8.0e-06 56.2 116 29.3
SEGI_31472 Sequoiadendron giganteum HOM05D003946 ORTHO05D004485 8.0e-06 56.2 123 30.9


User provided reference genes

Program Settings