Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2711 Vigna mungo HOM05D007916 ORTHO05D010074 1.0e-90 336.7 165 100.0
Phvul.002G115700 Phaseolus vulgaris HOM05D007916 ORTHO05D010074 1.2e-65 253.4 189 68.3
Glyma.11G085200 Glycine max HOM05D007916 ORTHO05D010074 2.3e-50 202.6 189 56.6
Lj2g0002075 Lotus japonicus HOM05D007916 ORTHO05D010074 1.8e-42 176.4 189 50.8
Lj2g0011068 Lotus japonicus HOM05D007916 ORTHO05D010074 2.4e-39 166.0 188 50.0
Ca_22424_v3 Cicer arietinum L. HOM05D007916 ORTHO05D010074 5.4e-39 164.9 189 48.1
Lalb_Chr09g0321231 Lupinus albus HOM05D007916 ORTHO05D010074 1.7e-37 159.8 189 46.0
Medtr8g073850 Medicago truncatula HOM05D007916 ORTHO05D010074 3.0e-37 159.1 189 47.1
Medtr8g073770 Medicago truncatula HOM05D007916 ORTHO05D010074 9.6e-36 154.1 189 46.0
CiPaw.08G181000 Carya illinoinensis HOM05D007916 ORTHO05D010074 1.6e-35 153.3 145 55.2
Glyma.09G198900 Glycine max HOM05D007916 ORTHO05D010074 1.6e-35 153.3 192 45.8
QL06p052846 Quercus lobata HOM05D007916 ORTHO05D010074 3.6e-35 152.1 145 54.5
Cfa007071 Carpinus fangiana HOM05D007916 ORTHO05D010074 8.1e-35 151.0 173 49.1
Cfa021284 Carpinus fangiana HOM05D007916 ORTHO05D010074 8.1e-35 151.0 173 49.1
Psat4g104200 Pisum sativum HOM05D007916 ORTHO05D010074 8.1e-35 151.0 189 44.4
TPR.G18290 Trifolium pratense HOM05D007916 ORTHO05D010074 1.1e-34 150.6 146 52.1
VMungo0251G0273 Vigna mungo HOM05D007916 ORTHO05D010074 1.1e-34 150.6 186 46.2
COL.COLO4_22545 Corchorus olitorius HOM05D007916 ORTHO05D010074 1.4e-34 150.2 188 46.3
MD02G1118100 Malus domestica HOM05D007916 ORTHO05D010074 3.1e-34 149.1 145 52.4
arahy.Tifrunner.gnm1.ann1.B3G9N7 Arachis hypogaea HOM05D007916 ORTHO05D010074 8.9e-34 147.5 146 51.4
arahy.Tifrunner.gnm1.ann1.IBR8Q2 Arachis hypogaea HOM05D007916 ORTHO05D010074 8.9e-34 147.5 146 51.4
HanXRQChr14g0442461 Helianthus annuus HOM05D007916 ORTHO05D010074 1.2e-33 147.1 145 53.1
CANSAT25G0415 Cannabis sativa HOM05D007916 ORTHO05D010074 2.0e-33 146.4 173 47.4
Hma1.2p1_0085F.1_g044830 Hydrangea macrophylla HOM05D007916 ORTHO05D010074 2.0e-33 146.4 188 46.8
Prupe.7G181300 Prunus persica HOM05D007916 ORTHO05D010074 2.0e-33 146.4 145 51.7
Manes.01G154600 Manihot esculenta HOM05D007916 ORTHO05D010074 2.6e-33 146.0 145 53.1
Manes.17G004000 Manihot esculenta HOM05D007916 ORTHO05D010074 3.4e-33 145.6 145 53.1
Manes.02G113500 Manihot esculenta HOM05D007916 ORTHO05D010074 4.4e-33 145.2 188 45.2
Thecc.01G006300 Theobroma cacao HOM05D007916 ORTHO05D010074 4.4e-33 145.2 188 44.7
MD02G1118400 Malus domestica HOM05D007916 ORTHO05D010074 7.6e-33 144.4 145 50.3
Phvul.003G269500 Phaseolus vulgaris HOM05D007916 ORTHO05D010074 1.3e-32 143.7 189 43.9
FAN28G0654 Fragaria x ananassa HOM05D007916 ORTHO05D010074 2.9e-32 142.5 145 51.0
Duzib264G1152 Durio zibethinus HOM05D007916 ORTHO05D010074 3.8e-32 142.1 183 47.5
Potri.005G100700 Populus trichocarpa HOM05D007916 ORTHO05D010074 3.8e-32 142.1 187 44.9
Dinv40180 Davidia involucrata HOM05D000046 ORTHO05D000195 4.9e-32 141.7 168 47.0
Nn5g30966 Nelumbo nucifera HOM05D007916 ORTHO05D010074 4.9e-32 141.7 145 50.3
TAR381G0850 Trochodendron aralioides HOM05D007916 ORTHO05D010074 4.9e-32 141.7 145 51.7
FvH4_1g10500 Fragaria vesca HOM05D007916 ORTHO05D010074 6.4e-32 141.4 145 50.3
FAN19G0206 Fragaria x ananassa HOM05D007916 ORTHO05D010074 6.4e-32 141.4 145 50.3
FAN26G2729 Fragaria x ananassa HOM05D007916 ORTHO05D010074 6.4e-32 141.4 145 50.3
FAN26G3374 Fragaria x ananassa HOM05D007916 ORTHO05D010074 6.4e-32 141.4 145 50.3
PGR102G1177 Punica granatum HOM05D007916 ORTHO05D010074 1.1e-31 140.6 146 50.7
ClCG10G000210 Citrullus lanatus HOM05D007916 ORTHO05D010074 1.4e-31 140.2 145 49.0
HanXRQChr14g0442451 Helianthus annuus HOM05D007916 ORTHO05D010074 1.4e-31 140.2 148 50.0
Sabra05G0083300 Salix brachista HOM05D007916 ORTHO05D010074 1.4e-31 140.2 172 48.3
MELO3C013719.2 Cucumis melo HOM05D007916 ORTHO05D010074 2.4e-31 139.4 145 48.3
PGSC0003DMG403001521 Solanum tuberosum HOM05D007916 ORTHO05D010074 4.2e-31 138.7 145 50.3
Ah.08g211140 Amaranthus hybridus HOM05D007916 ORTHO05D010074 5.4e-31 138.3 182 47.8
CAN.G1238.3 Capsicum annuum HOM05D007916 ORTHO05D010074 5.4e-31 138.3 145 49.0
RcHm_v2.0_Chr2g0097361 Rosa chinensis HOM05D007916 ORTHO05D010074 5.4e-31 138.3 145 49.7
Sopen02g027500 Solanum pennellii HOM05D007916 ORTHO05D010074 5.4e-31 138.3 145 50.3
Aqoxy6G01679 Aquilegia oxysepala HOM05D007916 ORTHO05D010074 9.3e-31 137.5 190 43.7
Lsat_1_v5_gn_2_73460 Lactuca sativa HOM05D007916 ORTHO05D010074 9.3e-31 137.5 187 44.4
MBI08_g04809_MAGBIO Magnolia biondii HOM05D007916 ORTHO05D010074 2.1e-30 136.3 145 49.7
AUR62040166 Chenopodium quinoa HOM05D007916 ORTHO05D010074 3.5e-30 135.6 144 50.7
Solyc02g082740.1 Solanum lycopersicum HOM05D007916 ORTHO05D010074 3.5e-30 135.6 145 49.7
CSS0010065 Camellia sinensis var. sinensis HOM05D007916 ORTHO05D010074 6.6e-29 131.3 145 50.3
Lj4P234T30 Lonicera japonica HOM05D007916 ORTHO05D010074 8.7e-29 131.0 91 63.7
AUR62037915 Chenopodium quinoa HOM05D007916 ORTHO05D010074 1.5e-28 130.2 144 48.6
ATR0661G436 Amborella trichopoda HOM05D007916 ORTHO05D010074 3.1e-26 122.5 179 40.8
Zm00001eb145860 Zea mays HOM05D007916 ORTHO05D010074 2.6e-25 119.4 155 41.3
Sabra05G0083200 Salix brachista HOM05D007916 ORTHO05D010074 1.3e-24 117.1 188 42.0
Potri.005G100600 Populus trichocarpa HOM05D007916 ORTHO05D010074 2.7e-22 109.4 144 42.4
EL10Ac1g00145 Beta vulgaris HOM05D007916 ORTHO05D010074 4.6e-22 108.6 144 43.1
Os01g0879200 Oryza sativa ssp. japonica HOM05D007916 ORTHO05D010074 3.9e-21 105.5 145 37.9
Ah.05g178650 Amaranthus hybridus HOM05D007916 ORTHO05D010074 2.8e-19 99.4 143 39.9
EL10Ac4g07997 Beta vulgaris HOM05D007916 ORTHO05D010074 1.2e-17 94.0 189 32.3
AUR62029252 Chenopodium quinoa HOM05D007916 ORTHO05D010074 5.8e-17 91.7 190 33.2
AUR62034214 Chenopodium quinoa HOM05D007916 ORTHO05D010074 9.9e-17 90.9 189 31.7
AUR62029249 Chenopodium quinoa HOM05D007916 ORTHO05D010074 2.9e-16 89.4 194 32.0
AUR62034212 Chenopodium quinoa HOM05D007916 ORTHO05D010074 2.9e-16 89.4 189 31.2
Os01g0879300 Oryza sativa ssp. japonica HOM05D007916 ORTHO05D010074 6.4e-16 88.2 99 48.5
Zm00001eb051440 Zea mays HOM05D007916 ORTHO05D010074 9.3e-15 84.3 95 43.2
AUR62014631 Chenopodium quinoa HOM05D007916 ORTHO05D010074 8.1e-11 71.2 86 38.4
Zm00001eb212920 Zea mays HOM05D007916 ORTHO05D010074 1.1e-10 70.9 88 39.8
Ah.09g237060 Amaranthus hybridus HOM05D007916 ORTHO05D010074 1.8e-10 70.1 86 38.4
SMO143G0023 Selaginella moellendorffii HOM05D007916 ORTHO05D010074 1.4e-07 60.5 88 29.5


User provided reference genes

Program Settings