Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 5.8e-53 210.7 111 100.0
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 2.9e-36 155.2 91 91.2
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 1.0e-25 120.2 94 75.5
arahy.Tifrunner.gnm1.ann1.F37JRW Arachis hypogaea HOM05D007293 ORTHO05D009143 2.8e-23 112.1 98 75.5
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 3.7e-23 111.7 101 65.3
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 1.4e-22 109.8 105 64.8
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 2.4e-22 109.0 98 66.3
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 9.0e-22 107.1 98 73.5
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 2.6e-21 105.5 99 61.6
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 2.6e-21 105.5 94 63.8
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 4.5e-21 104.8 96 66.7
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 7.1e-19 97.4 105 57.1
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 2.5e-16 89.0 101 57.4
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 3.3e-16 88.6 101 58.4
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.3e-15 86.7 101 55.4
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 1.3e-15 86.7 95 56.8
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 3.7e-15 85.1 98 58.2
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 4.8e-15 84.7 101 56.4
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 6.3e-15 84.3 102 53.9
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 1.1e-14 83.6 98 55.1
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.4e-14 82.4 101 53.5
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.4e-14 82.4 101 53.5
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 4.1e-14 81.6 90 55.6
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 5.3e-14 81.3 101 53.5
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 6.9e-14 80.9 108 52.8
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 9.0e-14 80.5 93 52.7
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.5e-13 79.7 100 55.0
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 2.6e-13 79.0 99 55.6
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 4.5e-13 78.2 99 50.5
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.7e-12 76.3 99 49.5
Medtr5g034360 Medicago truncatula HOM05D007293 ORTHO05D009143 1.7e-12 76.3 54 74.1
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 5.0e-12 74.7 102 52.0
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 6.5e-12 74.3 99 48.5
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 6.5e-12 74.3 103 51.5
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 8.5e-12 73.9 98 50.0
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 1.9e-11 72.8 99 48.5
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 2.5e-11 72.4 88 51.1
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 4.2e-11 71.6 99 51.5
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 4.2e-11 71.6 98 49.0
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 5.5e-11 71.2 99 49.5
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 7.2e-11 70.9 100 47.0
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 7.2e-11 70.9 102 49.0
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 7.2e-11 70.9 102 50.0
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 9.4e-11 70.5 98 52.0
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.2e-10 70.1 99 47.5
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.6e-10 69.7 98 52.0
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 2.1e-10 69.3 105 49.5
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 2.7e-10 68.9 102 49.0
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 3.6e-10 68.6 102 48.0
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 4.6e-10 68.2 102 49.0
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 1.0e-09 67.0 102 48.0
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 1.4e-09 66.6 78 57.7
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 3.9e-09 65.1 107 45.8
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 3.9e-09 65.1 107 45.8
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 3.9e-09 65.1 100 49.0
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 6.7e-09 64.3 104 49.0
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 1.1e-08 63.5 97 47.4
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.1e-08 63.5 102 46.1
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 1.9e-08 62.8 102 47.1
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 2.5e-08 62.4 102 46.1
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 4.3e-08 61.6 102 49.0
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 4.3e-08 61.6 92 44.6
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.7e-07 59.7 90 50.0
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 2.2e-07 59.3 94 47.9
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 2.2e-07 59.3 101 43.6
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 2.2e-07 59.3 60 53.3
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 2.8e-07 58.9 100 46.0
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 3.7e-07 58.5 99 46.5
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 3.7e-07 58.5 99 46.5
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 3.7e-07 58.5 107 43.9
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.8e-07 58.2 101 43.6
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 6.3e-07 57.8 99 46.5
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 1.4e-06 56.6 101 42.6
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 1.8e-06 56.2 121 39.7
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.4e-06 55.8 100 46.0
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.4e-06 55.8 101 44.6
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 3.1e-06 55.5 106 43.4
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 5.3e-06 54.7 44 70.5
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 9.1e-06 53.9 107 42.1


User provided reference genes

Program Settings