Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G2316 Vigna mungo HOM05D017790 ORTHO05D002759 2.3e-90 335.5 163 100.0
VMungo1127G1729 Vigna mungo HOM05D017790 ORTHO05D434159 8.5e-37 157.5 94 81.9
VMungo1215G2354 Vigna mungo HOM05D017790 ORTHO05D434747 5.5e-36 154.8 76 93.4
VMungo0540G0403 Vigna mungo HOM05D017790 ORTHO05D434043 4.6e-14 82.0 49 79.6
VMungo0251G1009 Vigna mungo HOM05D017790 ORTHO05D435150 2.3e-13 79.7 101 48.5
VMungo0331G1315 Vigna mungo HOM05D001170 ORTHO05D002759 8.0e-11 71.2 39 89.7
VMungo0647G0542 Vigna mungo HOM05D017790 ORTHO05D434306 1.1e-10 70.9 44 72.7
Phvul.010G153500 Phaseolus vulgaris HOM05D001170 ORTHO05D002759 1.5e-09 67.0 39 82.1
Glyma.08G209900 Glycine max HOM05D001170 ORTHO05D002759 2.6e-09 66.2 39 82.1
Glyma.07G032600 Glycine max HOM05D001170 ORTHO05D002759 5.8e-09 65.1 39 79.5
Glyma.13G363100 Glycine max HOM05D001170 ORTHO05D002759 1.3e-08 63.9 39 79.5
Manes.11G052500 Manihot esculenta HOM05D001170 ORTHO05D002759 1.3e-08 63.9 47 68.1
Ca_01086_v3 Cicer arietinum L. HOM05D001170 ORTHO05D002759 2.2e-08 63.2 39 71.8
Dinv11584 Davidia involucrata HOM05D001170 ORTHO05D002759 2.2e-08 63.2 47 63.8
CAN.G395.44 Capsicum annuum HOM05D001170 ORTHO05D002759 2.9e-08 62.8 47 63.8
Psat5g300480 Pisum sativum HOM05D001170 ORTHO05D002759 2.9e-08 62.8 39 74.4
Solyc06g067960.3 Solanum lycopersicum HOM05D001170 ORTHO05D002759 2.9e-08 62.8 47 63.8
Sopen06g025240 Solanum pennellii HOM05D001170 ORTHO05D002759 2.9e-08 62.8 47 63.8
Lj3g0003704 Lotus japonicus HOM05D001170 ORTHO05D002759 3.7e-08 62.4 69 50.7
MSTRG.334 Avicennia marina HOM05D001170 ORTHO05D002759 4.9e-08 62.0 49 59.2
CSS0016276 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D002759 4.9e-08 62.0 47 63.8
PGSC0003DMG401028515 Solanum tuberosum HOM05D001170 ORTHO05D002759 8.3e-08 61.2 47 61.7
Lj5A68T68 Lonicera japonica HOM05D001170 ORTHO05D002759 1.4e-07 60.5 47 61.7
Lj3g0006687 Lotus japonicus HOM05D001170 ORTHO05D002759 1.4e-07 60.5 39 69.2
Lalb_Chr22g0351021 Lupinus albus HOM05D001170 ORTHO05D002759 1.4e-07 60.5 39 71.8
Manes.04G117000 Manihot esculenta HOM05D001170 ORTHO05D002759 1.4e-07 60.5 39 69.2
Prupe.3G079000 Prunus persica HOM05D001170 ORTHO05D002759 1.4e-07 60.5 39 69.2
Prupe.8G067300 Prunus persica HOM05D001170 ORTHO05D002759 1.4e-07 60.5 47 59.6
Dinv30210 Davidia involucrata HOM05D001170 ORTHO05D002759 1.9e-07 60.1 47 61.7
Medtr2g103130 Medicago truncatula HOM05D001170 ORTHO05D002759 1.9e-07 60.1 39 69.2
TPR.G37160 Trifolium pratense HOM05D001170 ORTHO05D002759 2.4e-07 59.7 39 69.2
Cc04_g03980 Coffea canephora HOM05D001170 ORTHO05D002759 3.2e-07 59.3 36 69.4
Duzib192G0175 Durio zibethinus HOM05D001170 ORTHO05D002759 3.2e-07 59.3 47 59.6
HPP92_006344 Vanilla planifolia HOM05D001170 ORTHO05D002759 3.2e-07 59.3 50 54.0
Gohir.D10G074800 Gossypium hirsutum HOM05D001170 ORTHO05D002759 4.1e-07 58.9 48 56.2
PGR102G1290 Punica granatum HOM05D001170 ORTHO05D002759 4.1e-07 58.9 39 66.7
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 4.1e-07 58.9 36 75.0
CSS0045002 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D002759 5.4e-07 58.5 47 59.6
Cfa010927 Carpinus fangiana HOM05D001170 ORTHO05D002759 5.4e-07 58.5 47 59.6
ClCG10G010110 Citrullus lanatus HOM05D001170 ORTHO05D002759 5.4e-07 58.5 39 66.7
Haze_03014 Corylus avellana HOM05D001170 ORTHO05D002759 5.4e-07 58.5 47 59.6
Haze_03021 Corylus avellana HOM05D001170 ORTHO05D002759 5.4e-07 58.5 47 59.6
MELO3C017902.2 Cucumis melo HOM05D001170 ORTHO05D002759 5.4e-07 58.5 39 66.7
CsaV3_4G001380 Cucumis sativus L. HOM05D001170 ORTHO05D002759 5.4e-07 58.5 39 66.7
Nitab4.5_0000620g0090 Nicotiana tabacum HOM05D001170 ORTHO05D002759 5.4e-07 58.5 47 57.4
COL.COLO4_12888 Corchorus olitorius HOM05D001170 ORTHO05D002759 9.2e-07 57.8 47 59.6
Thecc.06G074000 Theobroma cacao HOM05D001170 ORTHO05D002759 9.2e-07 57.8 50 56.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 1.2e-06 57.4 35 74.3
Gohir.A10G076500 Gossypium hirsutum HOM05D001170 ORTHO05D002759 1.2e-06 57.4 50 54.0
TAR636G1119 Trochodendron aralioides HOM05D001170 ORTHO05D002759 1.2e-06 57.4 48 56.2
GSVIVG01017244001 Vitis vinifera HOM05D001170 ORTHO05D002759 1.2e-06 57.4 39 64.1
CSS0029114 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D002759 1.6e-06 57.0 50 54.0
CiPaw.01G244000 Carya illinoinensis HOM05D001170 ORTHO05D002759 1.6e-06 57.0 47 59.6
Gorai.011G080700 Gossypium raimondii HOM05D001170 ORTHO05D002759 1.6e-06 57.0 50 54.0
TWI12G0603 Tripterygium wilfordii HOM05D001170 ORTHO05D002759 1.6e-06 57.0 47 59.6
TWI18G1279 Tripterygium wilfordii HOM05D001170 ORTHO05D002759 1.6e-06 57.0 39 66.7
Oeu033463.1 Olea europaea HOM05D001170 ORTHO05D002759 2.1e-06 56.6 47 57.4
MBI04_g29831_MAGBIO Magnolia biondii HOM05D001170 ORTHO05D009038 2.7e-06 56.2 48 56.2
vmacro15570 Vaccinium macrocarpon HOM05D001170 ORTHO05D002759 2.7e-06 56.2 106 35.8
Atru.chr1.3105 Acer truncatum HOM05D001170 ORTHO05D002759 3.5e-06 55.8 47 55.3
CANSAT64G0395 Cannabis sativa HOM05D001170 ORTHO05D002759 3.5e-06 55.8 39 61.5
Peaxi162Scf00207g00075 Petunia axillaris HOM05D000347 ORTHO05D002759 3.5e-06 55.8 47 55.3
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 3.5e-06 55.8 34 76.5
HanXRQChr10g0304481 Helianthus annuus HOM05D001170 ORTHO05D002759 4.6e-06 55.5 39 64.1
QL07p015408 Quercus lobata HOM05D001170 ORTHO05D002759 4.6e-06 55.5 39 64.1
Actinidia28998 Actinidia chinensis HOM05D001170 ORTHO05D002759 6.0e-06 55.1 47 55.3
CSS0043406 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D002759 6.0e-06 55.1 47 55.3
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 6.0e-06 55.1 32 71.9
CSS0022469 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D002759 7.8e-06 54.7 36 63.9
Migut.B01277 Erythranthe guttata HOM05D001170 ORTHO05D002759 7.8e-06 54.7 60 48.3
MBI01_g11878_MAGBIO Magnolia biondii HOM05D001170 ORTHO05D002759 7.8e-06 54.7 48 54.2
Nitab4.5_0003512g0090 Nicotiana tabacum HOM05D001170 ORTHO05D002759 7.8e-06 54.7 44 59.1


User provided reference genes

Program Settings