Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 5.2e-103 377.9 212 100.0
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 3.6e-96 355.1 212 93.4
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 7.3e-89 330.9 212 89.6
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 7.3e-89 330.9 212 79.7
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 2.8e-88 328.9 212 85.8
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.1e-87 327.0 212 78.3
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.2e-86 323.6 204 90.2
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 8.4e-85 317.4 207 88.4
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 3.5e-83 312.0 212 85.8
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.4e-79 300.1 214 72.9
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.3e-77 293.5 211 82.5
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.2e-76 288.9 211 81.5
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 3.2e-76 288.9 210 79.0
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 5.4e-76 288.1 210 80.0
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 2.7e-75 285.8 212 67.5
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.6e-75 285.0 210 76.7
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 6.0e-75 284.6 210 76.2
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.9e-74 282.0 210 75.7
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 5.1e-74 281.6 210 75.2
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 5.1e-74 281.6 210 75.7
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 5.1e-74 281.6 210 77.6
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 6.7e-74 281.2 210 77.1
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 6.7e-74 281.2 207 68.6
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.1e-73 280.4 210 77.6
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.5e-73 280.0 207 68.6
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.5e-73 280.0 210 70.5
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.5e-73 280.0 210 70.5
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.9e-73 279.6 207 77.3
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.9e-73 279.6 210 77.6
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.9e-73 279.6 210 77.6
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.9e-73 279.6 210 76.2
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.5e-73 279.3 210 77.1
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 2.5e-73 279.3 209 76.6
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 3.3e-73 278.9 210 77.6
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.3e-73 278.5 210 75.2
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 4.3e-73 278.5 209 75.6
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.6e-72 276.6 210 75.2
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 1.6e-72 276.6 207 77.3
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 3.7e-72 275.4 207 76.8
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 4.8e-72 275.0 207 75.8
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 6.2e-72 274.6 207 73.9
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.4e-71 273.5 210 76.7
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 5.3e-71 271.6 210 74.8
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 9.0e-71 270.8 208 65.4
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.5e-70 270.0 207 65.2
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 5.8e-70 268.1 210 65.7
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-69 266.5 207 72.0
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.8e-69 265.4 207 74.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 8.4e-69 264.2 209 63.2
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 8.4e-69 264.2 207 65.2
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.1e-68 263.8 210 71.9
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.5e-68 262.7 210 70.5
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.5e-68 262.7 207 72.5
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 3.2e-68 262.3 210 63.3
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 3.2e-68 262.3 207 72.5
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.6e-67 260.0 207 61.8
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.7e-67 259.2 207 70.5
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 4.6e-67 258.5 210 72.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 7.9e-67 257.7 210 72.4
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 7.9e-67 257.7 207 61.4
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 7.9e-67 257.7 209 62.7
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.0e-66 257.3 190 77.9
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.3e-66 256.9 210 72.9
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.3e-66 256.9 210 72.9
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.3e-66 256.9 219 68.0
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 1.3e-66 256.9 164 76.8
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.8e-66 256.5 210 72.4
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.8e-66 256.5 210 74.8
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 2.3e-66 256.1 210 72.4
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 2.3e-66 256.1 210 72.4
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 3.0e-66 255.8 210 71.9
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.0e-66 255.8 210 70.5
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 3.0e-66 255.8 208 69.7
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 3.0e-66 255.8 206 71.8
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 3.0e-66 255.8 207 72.0
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 3.9e-66 255.4 209 63.6
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.1e-65 253.8 210 71.9
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 1.1e-65 253.8 206 70.9
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.5e-65 253.4 210 67.1
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.9e-65 253.1 207 72.5
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 1.9e-65 253.1 204 73.0
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.5e-65 252.7 210 71.4
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.5e-65 252.7 207 71.5
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 3.3e-65 252.3 210 71.4
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 3.3e-65 252.3 204 72.5
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 3.3e-65 252.3 204 72.5
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 4.3e-65 251.9 204 72.5
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 4.3e-65 251.9 210 70.5
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 7.4e-65 251.1 207 66.7
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 2.1e-64 249.6 208 66.8
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 4.8e-64 248.4 209 59.3
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 6.2e-64 248.1 215 58.6
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 4.1e-63 245.4 207 70.0
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 9.0e-63 244.2 207 70.5
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.5e-62 243.4 207 71.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 1.5e-62 243.4 207 67.6
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 4.5e-62 241.9 261 51.0
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 7.6e-62 241.1 209 57.9
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.7e-61 240.0 184 75.5
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.8e-61 238.8 166 68.7
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 8.4e-61 237.7 207 66.7
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 4.2e-60 235.3 210 65.2
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 3.0e-58 229.2 207 66.2
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 8.7e-58 227.6 210 64.3
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 1.9e-57 226.5 204 62.3
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.2e-56 223.0 209 53.6
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 3.1e-55 219.2 198 61.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.3e-53 213.8 210 55.7
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 8.5e-53 211.1 208 53.8
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 9.1e-47 191.0 203 57.1
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 2.5e-44 183.0 207 61.8
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 5.1e-42 175.3 167 53.9
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.1e-41 174.1 166 53.0
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.1e-41 174.1 164 55.5
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.2e-40 169.9 209 56.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 4.2e-36 155.6 135 56.3
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.3e-32 144.1 156 46.2
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 1.8e-26 123.6 96 67.7
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.4e-15 87.4 45 88.9
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 4.1e-15 85.9 86 72.1
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.7e-14 83.2 79 54.4
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.9e-08 62.4 146 30.1
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 60.8 119 34.5
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 2.4e-07 60.1 94 35.1
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 2.4e-07 60.1 164 26.2
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-07 59.3 146 29.5
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-07 59.3 146 29.5
FvH4_1g14800 Fragaria vesca HOM05D000710 ORTHO05D000336 5.4e-07 58.9 164 27.4
BcaC07g42481 Brassica carinata HOM05D000710 ORTHO05D000336 9.2e-07 58.2 151 29.1
FAN19G1902 Fragaria x ananassa HOM05D000710 ORTHO05D000336 9.2e-07 58.2 164 26.8
RcHm_v2.0_Chr2g0103761 Rosa chinensis HOM05D000710 ORTHO05D000336 9.2e-07 58.2 162 26.5
Sc03g0001840 Simmondsia chinensis HOM05D001905 ORTHO05D001820 2.0e-06 57.0 158 29.7
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-06 56.2 78 37.2
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-06 56.2 78 37.2
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 3.5e-06 56.2 170 27.6
Sed0020917 Sechium edule HOM05D001905 ORTHO05D001820 4.6e-06 55.8 161 32.3
Duzib264G1203 Durio zibethinus HOM05D001905 ORTHO05D001820 7.8e-06 55.1 150 31.3


User provided reference genes

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