Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 9.9e-197 689.9 336 100.0
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 5.3e-174 614.4 334 90.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.1e-150 535.4 341 78.9
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 7.7e-133 477.6 339 68.4
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 3.8e-132 475.3 345 70.7
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 3.2e-131 472.2 337 71.8
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 4.7e-130 468.4 340 68.5
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 5.2e-129 464.9 340 67.9
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 6.7e-129 464.5 345 69.6
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 5.5e-123 444.9 316 67.1
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 3.6e-122 442.2 374 61.2
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 3.0e-121 439.1 321 68.2
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 5.2e-121 438.3 310 70.3
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 4.4e-120 435.3 258 78.3
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 9.7e-120 434.1 277 74.0
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.8e-118 429.9 273 73.3
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 3.1e-118 429.1 277 73.6
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 9.1e-118 427.6 280 72.1
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.0e-117 426.4 249 80.3
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.5e-117 425.6 279 71.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 7.7e-117 424.5 278 72.3
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 7.7e-117 424.5 286 69.9
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.3e-116 423.7 341 61.9
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 5.0e-116 421.8 303 69.0
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 1.1e-115 420.6 261 72.8
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 9.4e-115 417.5 309 67.0
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.6e-114 416.8 283 68.9
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.7e-114 415.2 272 73.2
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.7e-114 415.2 272 73.2
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.3e-113 412.9 276 71.4
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 2.3e-113 412.9 277 69.7
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 3.0e-113 412.5 279 70.3
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 6.8e-113 411.4 268 73.9
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 8.8e-113 411.0 333 59.8
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.5e-112 407.9 257 71.2
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 7.5e-112 407.9 257 72.0
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.8e-112 407.5 338 61.2
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 9.8e-112 407.5 272 71.3
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.7e-111 406.8 268 73.5
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 2.2e-111 406.4 328 62.8
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.8e-111 406.0 254 72.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 6.3e-111 404.8 280 67.1
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 1.2e-109 400.6 317 64.4
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 2.0e-109 399.8 272 69.5
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 5.9e-109 398.3 273 68.9
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.0e-108 397.5 284 65.1
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 1.7e-108 396.7 257 70.0
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 1.7e-108 396.7 255 71.8
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 1.7e-108 396.7 396 54.0
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 5.0e-108 395.2 257 68.1
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 2.5e-107 392.9 337 59.6
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 1.2e-106 390.6 291 67.4
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.2e-106 390.6 267 67.4
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.6e-106 390.2 265 66.8
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.6e-106 390.2 269 67.3
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 2.1e-106 389.8 310 60.6
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 6.1e-106 388.3 267 66.7
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 6.1e-106 388.3 267 66.7
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 6.1e-106 388.3 267 66.7
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 2.3e-105 386.3 280 63.9
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 4.0e-105 385.6 290 63.1
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.0e-105 385.6 290 62.8
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 8.9e-105 384.4 267 66.7
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 2.0e-104 383.3 243 75.3
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.0e-104 383.3 225 78.7
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.4e-104 382.5 267 66.7
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.3e-103 380.6 314 60.5
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 6.3e-103 378.3 343 58.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 6.3e-103 378.3 309 57.9
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 8.3e-103 377.9 271 65.7
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 8.3e-103 377.9 254 70.1
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 4.1e-102 375.6 257 66.1
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 7.0e-102 374.8 248 66.9
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 9.2e-102 374.4 372 52.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.5e-99 367.1 225 74.7
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 3.6e-98 362.5 232 73.3
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.8e-97 360.1 251 67.7
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 3.1e-97 359.4 251 63.3
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 3.5e-93 345.9 212 76.9
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 4.6e-93 345.5 267 61.4
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 3.6e-90 335.9 376 48.1
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.0e-88 330.1 273 59.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 8.6e-84 314.7 342 49.7
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 9.5e-83 311.2 336 50.0
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 1.2e-82 310.8 252 58.3
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 6.2e-82 308.5 164 87.2
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 5.2e-81 305.4 271 56.1
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.9e-78 297.0 228 59.6
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 7.8e-77 291.6 181 73.5
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.7e-76 290.4 181 72.4
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.3e-76 290.0 230 57.8
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 2.3e-76 290.0 230 57.8
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 2.5e-75 286.6 190 67.4
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.2e-74 284.3 191 68.1
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 6.2e-74 282.0 291 46.7
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.6e-72 276.6 248 58.1
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 2.1e-69 266.9 242 50.0
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 4.6e-69 265.8 178 68.5
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 5.6e-67 258.8 194 67.5
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.1e-65 253.1 193 60.6
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 4.4e-64 249.2 167 66.5
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.8e-61 238.4 321 44.5
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.8e-61 238.4 321 44.5
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 4.0e-57 226.1 215 47.9
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 7.4e-51 205.3 275 42.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 2.1e-50 203.8 201 58.7
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 6.7e-44 182.2 130 62.3
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.6e-43 178.3 130 61.5
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 7.6e-40 168.7 242 38.0
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.6e-37 159.5 130 57.7
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 2.7e-29 133.7 102 60.8
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 3.3e-27 126.7 92 60.9
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 1.1e-25 121.7 250 34.0
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 3.8e-23 113.2 259 32.8
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 1.2e-21 108.2 73 65.8
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.4e-20 104.8 266 29.7
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.4e-20 104.8 63 79.4
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 2.8e-10 70.5 116 43.1
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 1.0e-07 62.0 65 53.8


User provided reference genes

Program Settings