Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 2.7e-59 231.9 123 100.0
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 7.1e-52 207.2 123 88.6
Glyma.07G163600 Glycine max HOM05D004388 ORTHO05D005106 3.1e-47 191.8 125 82.4
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 6.7e-42 174.1 128 76.6
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 5.8e-38 161.0 117 77.8
Medtr1g034260 Medicago truncatula HOM05D004388 ORTHO05D005106 1.4e-36 156.4 128 71.1
Ca_12477_v3 Cicer arietinum L. HOM05D004388 ORTHO05D005106 1.9e-36 156.0 125 71.2
QL03p018404 Quercus lobata HOM05D004388 ORTHO05D005106 2.7e-35 152.1 117 69.2
QL11p039202 Quercus lobata HOM05D004388 ORTHO05D005106 7.9e-35 150.6 117 67.5
CiPaw.05G058500 Carya illinoinensis HOM05D004388 ORTHO05D005106 5.1e-34 147.9 124 66.1
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 1.1e-33 146.7 126 62.7
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 2.5e-33 145.6 129 63.6
Gohir.D01G173000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 5.6e-33 144.4 126 65.9
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 7.4e-33 144.1 99 77.8
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 9.6e-33 143.7 126 62.7
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 1.6e-32 142.9 125 67.2
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 2.1e-32 142.5 121 66.9
Thecc.02G028000 Theobroma cacao HOM05D004388 ORTHO05D005106 2.1e-32 142.5 120 62.5
Hma1.2p1_1527F.1_g289065 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 3.7e-32 141.7 122 64.8
TAR625G0696 Trochodendron aralioides HOM05D004388 ORTHO05D005106 4.8e-32 141.4 128 67.2
Gorai.002G214600 Gossypium raimondii HOM05D004388 ORTHO05D005106 6.2e-32 141.0 123 65.0
Lalb_Chr01g0003011 Lupinus albus HOM05D004388 ORTHO05D005106 6.2e-32 141.0 103 75.7
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 1.4e-31 139.8 124 62.9
Nn5g29406 Nelumbo nucifera HOM05D004388 ORTHO05D005106 1.4e-31 139.8 125 65.6
Potri.004G147300 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.4e-31 139.8 122 64.8
Potri.009G108700 Populus trichocarpa HOM05D004388 ORTHO05D005106 1.4e-31 139.8 124 62.9
Sc15g0006590 Simmondsia chinensis HOM05D004388 ORTHO05D005106 1.8e-31 139.4 126 63.5
Gohir.A01G181900 Gossypium hirsutum HOM05D004388 ORTHO05D005106 3.1e-31 138.7 126 65.1
Sabra09G0082900 Salix brachista HOM05D004388 ORTHO05D005106 3.1e-31 138.7 124 63.7
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 4.0e-31 138.3 124 62.1
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 5.3e-31 137.9 126 63.5
CSS0032006 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 5.3e-31 137.9 104 71.2
Sed0011034 Sechium edule HOM05D004388 ORTHO05D005106 5.3e-31 137.9 122 62.3
arahy.Tifrunner.gnm1.ann1.RG9LRA Arachis hypogaea HOM05D004388 ORTHO05D005106 6.9e-31 137.5 122 63.9
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 9.0e-31 137.1 128 62.5
MSTRG.20123 Avicennia marina HOM05D004388 ORTHO05D005106 1.5e-30 136.3 117 62.4
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 2.6e-30 135.6 124 63.7
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 2.6e-30 135.6 124 63.7
Hma1.2p1_0584F.1_g183220 Hydrangea macrophylla HOM05D004388 ORTHO05D005106 2.6e-30 135.6 125 63.2
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 3.4e-30 135.2 122 60.7
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 4.5e-30 134.8 121 62.8
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 4.5e-30 134.8 122 63.1
GSVIVG01009587001 Vitis vinifera HOM05D004388 ORTHO05D005106 4.5e-30 134.8 122 60.7
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 7.6e-30 134.0 111 64.0
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 7.6e-30 134.0 121 62.0
Gorai.005G264100 Gossypium raimondii HOM05D004388 ORTHO05D005106 7.6e-30 134.0 125 60.0
Gohir.D02G236000 Gossypium hirsutum HOM05D004388 ORTHO05D005106 1.3e-29 133.3 125 60.0
MBI16_g31481_MAGBIO Magnolia biondii HOM05D004388 ORTHO05D005106 1.3e-29 133.3 126 61.1
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 1.7e-29 132.9 122 61.5
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 1.7e-29 132.9 120 64.2
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 2.2e-29 132.5 120 60.0
CSS0020304 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 2.2e-29 132.5 120 60.0
Duzib248G0675 Durio zibethinus HOM05D004388 ORTHO05D005106 2.2e-29 132.5 110 65.5
FvH4_1g27200 Fragaria vesca HOM05D004388 ORTHO05D005106 2.2e-29 132.5 120 62.5
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 2.2e-29 132.5 124 63.7
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 2.9e-29 132.1 124 61.3
Duzib052G1120 Durio zibethinus HOM05D004388 ORTHO05D005106 3.8e-29 131.7 124 61.3
FAN26G1198 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.8e-29 131.7 122 61.5
FAN28G0470 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.8e-29 131.7 122 61.5
Phvul.009G061900 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 3.8e-29 131.7 108 63.9
Gohir.A03G214500 Gossypium hirsutum HOM05D004388 ORTHO05D005106 4.9e-29 131.3 125 58.4
RcHm_v2.0_Chr3g0487591 Rosa chinensis HOM05D004388 ORTHO05D005106 4.9e-29 131.3 124 58.9
arahy.Tifrunner.gnm1.ann1.ISKM3Z Arachis hypogaea HOM05D004388 ORTHO05D005106 8.4e-29 130.6 122 61.5
DCAR_001610 Daucus carota HOM05D004388 ORTHO05D005106 8.4e-29 130.6 126 58.7
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 8.4e-29 130.6 124 58.1
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.4e-29 130.6 124 58.1
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.4e-29 130.6 123 59.3
FAN19G2330 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.4e-29 130.6 120 61.7
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 8.4e-29 130.6 115 61.7
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 1.1e-28 130.2 119 59.7
Duzib248G0127 Durio zibethinus HOM05D004388 ORTHO05D005106 1.1e-28 130.2 124 59.7
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.4e-28 129.8 124 58.1
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 1.4e-28 129.8 112 61.6
Atru.BG.71.p Acer truncatum HOM05D004388 ORTHO05D005106 1.9e-28 129.4 94 75.5
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 124 58.1
FAN23G2994 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 122 60.7
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 123 59.3
FAN28G0922 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 122 60.7
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 1.9e-28 129.4 128 62.5
Duzib132G0841 Durio zibethinus HOM05D004388 ORTHO05D005106 2.5e-28 129.0 126 58.7
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 3.2e-28 128.6 123 58.5
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 3.2e-28 128.6 123 61.0
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 4.2e-28 128.3 125 61.6
Glyma.06G035900 Glycine max HOM05D004388 ORTHO05D005106 4.2e-28 128.3 106 66.0
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 4.2e-28 128.3 123 60.2
TWI56G1138 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 4.2e-28 128.3 125 59.2
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 5.5e-28 127.9 123 58.5
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 5.5e-28 127.9 123 58.5
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 5.5e-28 127.9 124 59.7
Solyc01g109040.4 Solanum lycopersicum HOM05D004388 ORTHO05D005106 5.5e-28 127.9 123 60.2
Nitab4.5_0008194g0060 Nicotiana tabacum HOM05D004388 ORTHO05D005106 7.1e-28 127.5 123 60.2
Sopen01g051240 Solanum pennellii HOM05D004388 ORTHO05D005106 7.1e-28 127.5 123 59.3
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 9.3e-28 127.1 124 59.7
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 9.3e-28 127.1 122 61.5
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 9.3e-28 127.1 108 63.0
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 1.6e-27 126.3 124 58.9
unitig_21.g20762 Utricularia gibba HOM05D004388 ORTHO05D005106 1.6e-27 126.3 119 57.1
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 2.1e-27 125.9 125 59.2
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 2.7e-27 125.6 120 62.5
Glyma.04G035900 Glycine max HOM05D004388 ORTHO05D005106 2.7e-27 125.6 120 60.8
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 2.7e-27 125.6 126 60.3
Duzib248G1645 Durio zibethinus HOM05D004388 ORTHO05D005106 3.5e-27 125.2 124 57.3
Migut.B00292 Erythranthe guttata HOM05D004388 ORTHO05D005106 4.6e-27 124.8 123 60.2
Psat6g097040 Pisum sativum HOM05D004388 ORTHO05D005106 4.6e-27 124.8 131 61.1
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 7.9e-27 124.0 126 57.9
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 7.9e-27 124.0 126 57.9
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 7.9e-27 124.0 126 57.9
Lalb_Chr08g0245721 Lupinus albus HOM05D004388 ORTHO05D005106 7.9e-27 124.0 122 59.8
Prupe.8G112900 Prunus persica HOM05D004388 ORTHO05D005106 1.0e-26 123.6 121 57.9
Cpa.g.sc64.17 Carica papaya HOM05D004388 ORTHO05D005106 1.3e-26 123.2 123 61.8
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 1.3e-26 123.2 126 58.7
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 2.3e-26 122.5 126 57.9
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 2.3e-26 122.5 126 57.9
ECA236G2461 Erigeron canadensis HOM05D004388 ORTHO05D005106 5.1e-26 121.3 124 60.5
Potri.014G037000 Populus trichocarpa HOM05D004388 ORTHO05D005106 5.1e-26 121.3 124 58.9
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 5.1e-26 121.3 121 57.9
Lj1g0026402 Lotus japonicus HOM05D004388 ORTHO05D005106 6.7e-26 120.9 101 63.4
AT2G26500 Arabidopsis thaliana HOM05D004388 ORTHO05D005106 8.7e-26 120.6 127 59.8
Carub.0004s0666 Capsella rubella HOM05D004388 ORTHO05D005106 8.7e-26 120.6 127 59.8
AL4G19340 Arabidopsis lyrata HOM05D004388 ORTHO05D005106 1.1e-25 120.2 127 59.8
DCAR_000094 Daucus carota HOM05D004388 ORTHO05D005106 1.1e-25 120.2 122 55.7
DCAR_029046 Daucus carota HOM05D004388 ORTHO05D005106 1.1e-25 120.2 122 55.7
Sabra14G0026600 Salix brachista HOM05D004388 ORTHO05D005106 1.1e-25 120.2 126 58.7
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.5e-25 119.8 98 64.3
MD10G1086700 Malus domestica HOM05D004388 ORTHO05D005106 2.5e-25 119.0 114 60.5
SalBow6G5992 Salvia bowleyana HOM05D004388 ORTHO05D005106 2.5e-25 119.0 121 59.5
unitig_0.g849 Utricularia gibba HOM05D004388 ORTHO05D005106 4.3e-25 118.2 121 54.5
unitig_744.g24243 Utricularia gibba HOM05D004388 ORTHO05D005106 4.3e-25 118.2 120 52.5
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 7.4e-25 117.5 123 56.9
MD05G1072400 Malus domestica HOM05D004388 ORTHO05D005106 9.7e-25 117.1 123 56.1
TWI12G0249 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 2.2e-24 115.9 128 58.6
CARHR118500 Cardamine hirsuta HOM05D004388 ORTHO05D005106 3.7e-24 115.2 124 55.6
Aa31LG5G9370 Aethionema arabicum HOM05D004388 ORTHO05D005106 4.8e-24 114.8 127 58.3
PGSC0003DMG400006208 Solanum tuberosum HOM05D004388 ORTHO05D005106 4.8e-24 114.8 123 52.8
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 6.3e-24 114.4 122 57.4
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 6.3e-24 114.4 122 56.6
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 6.3e-24 114.4 118 57.6
TWI36G1636 Tripterygium wilfordii HOM05D004388 ORTHO05D005106 6.3e-24 114.4 128 54.7
Sopen10g022090 Solanum pennellii HOM05D004388 ORTHO05D005106 8.2e-24 114.0 118 54.2
Thecc.08G017000 Theobroma cacao HOM05D004388 ORTHO05D005106 3.1e-23 112.1 127 56.7
HanXRQChr04g0128391 Helianthus annuus HOM05D004388 ORTHO05D005106 6.9e-23 110.9 125 57.6
HPP92_017776 Vanilla planifolia HOM05D004388 ORTHO05D005106 9.0e-23 110.5 123 56.9
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 1.5e-22 109.8 126 54.8
Eucgr.I01216 Eucalyptus grandis HOM05D004388 ORTHO05D005106 2.0e-22 109.4 104 55.8
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 5.9e-22 107.8 127 54.3
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 1.1e-20 103.6 121 50.4
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 1.9e-20 102.8 121 50.4
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 3.2e-20 102.1 114 52.6
Rhsim05G0079000 Rhododendron simsii HOM05D004388 ORTHO05D005106 9.3e-20 100.5 124 53.2
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 1.0e-18 97.1 123 48.8
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 3.9e-18 95.1 91 56.0
TPR.G40836 Trifolium pratense HOM05D004388 ORTHO05D005106 1.5e-17 93.2 76 67.1
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 5.7e-17 91.3 123 43.1
Potri.002G130000 Populus trichocarpa HOM05D004388 ORTHO05D005106 2.4e-15 85.9 103 52.4
Psat4g068600 Pisum sativum HOM05D004388 ORTHO05D005106 3.1e-15 85.5 108 53.7
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 2.0e-14 82.8 118 46.6
Oeu010570.1 Olea europaea HOM05D000395 ORTHO05D000088 5.0e-13 78.2 81 56.8
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 1.9e-12 76.3 121 37.2
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 1.9e-12 76.3 70 55.7
CDE01G0191 Ceratophyllum demersum HOM05D004388 ORTHO05D005106 5.5e-12 74.7 50 78.0
Psat3g122680 Pisum sativum HOM05D004388 ORTHO05D005106 1.6e-11 73.2 111 47.7
CBR_g48936 Chara braunii HOM05D004388 ORTHO05D005106 6.1e-11 71.2 115 40.9
BcaB08g35304 Brassica carinata HOM05D004388 ORTHO05D005106 3.0e-10 68.9 57 71.9


User provided reference genes

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