Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G1388 Vigna mungo HOM05D005816 ORTHO05D006915 2.0e-69 265.8 146 100.0
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 1.1e-22 110.5 112 72.3
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 1.6e-13 80.1 99 58.6
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 2.6e-13 79.3 117 52.1
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 3.5e-13 79.0 121 54.5
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 5.9e-13 78.2 120 53.3
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 2.2e-12 76.3 118 55.9
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.1e-11 73.9 100 49.0
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.1e-11 73.9 100 49.0
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 1.1e-11 73.9 109 59.6
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 4.2e-11 72.0 97 47.4
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 4.2e-11 72.0 100 48.0
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 5.5e-11 71.6 113 53.1
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 3.6e-10 68.9 109 44.0
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 1.0e-09 67.4 83 48.2
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 1.0e-09 67.4 114 54.4
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 1.8e-09 66.6 106 48.1
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 1.8e-09 66.6 75 52.0
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 2.3e-09 66.2 71 63.4
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 2.3e-09 66.2 104 44.2
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 4.0e-09 65.5 78 47.4
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 4.0e-09 65.5 97 45.4
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 4.0e-09 65.5 105 41.9
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 6.7e-09 64.7 77 46.8
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 6.7e-09 64.7 96 46.9
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 8.8e-09 64.3 113 42.5
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 8.8e-09 64.3 74 52.7
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 8.8e-09 64.3 108 40.7
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 1.2e-08 63.9 124 41.1
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 2.0e-08 63.2 112 40.2
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.0e-08 63.2 104 45.2
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 2.6e-08 62.8 95 51.6
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 2.6e-08 62.8 114 43.0
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 2.6e-08 62.8 105 42.9
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 2.6e-08 62.8 77 44.2
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 3.3e-08 62.4 108 50.0
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 3.3e-08 62.4 143 37.8
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 3.3e-08 62.4 108 44.4
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 5.7e-08 61.6 120 41.7
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 7.5e-08 61.2 118 47.5
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 9.7e-08 60.8 72 47.2
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.3e-07 60.5 112 39.3
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 1.3e-07 60.5 107 42.1
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 1.3e-07 60.5 113 38.9
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.3e-07 60.5 106 38.7
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 1.7e-07 60.1 106 49.1
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 1.7e-07 60.1 112 39.3
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 1.7e-07 60.1 77 44.2
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 1.7e-07 60.1 114 40.4
Sopen05g005720 Solanum pennellii HOM05D005816 ORTHO05D006915 1.7e-07 60.1 85 50.6
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 2.2e-07 59.7 65 50.8
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 2.2e-07 59.7 111 40.5
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 2.2e-07 59.7 105 41.9
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 2.8e-07 59.3 112 41.1
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 4.8e-07 58.5 108 38.9
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 6.3e-07 58.2 98 44.9
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 8.2e-07 57.8 143 37.1
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 8.2e-07 57.8 70 44.3
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 8.2e-07 57.8 110 35.5
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 8.2e-07 57.8 110 35.5
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 8.2e-07 57.8 113 36.3
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 8.2e-07 57.8 125 40.0
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 8.2e-07 57.8 127 40.2
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 1.1e-06 57.4 104 41.3
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 1.1e-06 57.4 97 44.3
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.1e-06 57.4 128 34.4
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 1.1e-06 57.4 117 39.3
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.1e-06 57.4 75 44.0
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 1.4e-06 57.0 66 48.5
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 1.4e-06 57.0 79 45.6
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 1.8e-06 56.6 61 60.7
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 1.8e-06 56.6 108 38.0
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 1.8e-06 56.6 105 41.9
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 1.8e-06 56.6 132 33.3
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 2.4e-06 56.2 132 47.0
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 2.4e-06 56.2 130 36.2
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 3.1e-06 55.8 96 40.6
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 3.1e-06 55.8 102 50.0
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 3.1e-06 55.8 108 38.0
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 3.1e-06 55.8 113 39.8
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 4.1e-06 55.5 112 40.2
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 4.1e-06 55.5 125 36.8
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 7.0e-06 54.7 66 50.0
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 7.0e-06 54.7 123 34.1
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 7.0e-06 54.7 107 48.6
Aa31LG7G8500 Aethionema arabicum HOM05D001658 ORTHO05D001406 9.1e-06 54.3 30 76.7
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 9.1e-06 54.3 100 39.0


User provided reference genes

Program Settings