Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 7.1e-93 344.0 180 100.0
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 2.7e-84 315.5 180 90.6
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.1e-76 289.3 189 83.1
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 2.1e-68 262.7 181 76.2
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 1.0e-59 233.8 181 72.4
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 8.8e-59 230.7 181 64.6
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.1e-58 230.3 172 68.6
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.5e-58 229.9 184 66.8
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.6e-58 229.2 184 66.3
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 1.3e-57 226.9 181 66.3
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.2e-57 226.1 181 65.7
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 6.3e-57 224.6 179 65.9
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 6.9e-56 221.1 183 61.7
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 9.1e-56 220.7 150 73.3
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 1.5e-55 219.9 180 63.9
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 3.4e-55 218.8 183 60.7
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 5.9e-55 218.0 173 67.6
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 1.0e-54 217.2 189 63.0
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 6.5e-54 214.5 182 58.8
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 1.4e-53 213.4 190 61.1
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 1.9e-53 213.0 180 64.4
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 3.2e-53 212.2 182 58.2
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 3.2e-53 212.2 151 68.9
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 9.4e-53 210.7 151 68.2
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.2e-52 210.3 151 68.9
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.2e-52 210.3 182 57.1
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.6e-52 209.9 174 62.6
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.1e-52 209.5 175 61.1
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 2.1e-52 209.5 174 60.3
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.7e-52 209.1 171 63.7
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.7e-52 209.1 171 64.9
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.4e-51 206.8 182 56.6
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 2.3e-51 206.1 178 61.2
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 3.9e-51 205.3 157 65.6
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 3.9e-51 205.3 181 58.0
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 5.2e-51 204.9 184 59.8
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 5.2e-51 204.9 176 61.9
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 5.2e-51 204.9 185 58.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 8.8e-51 204.1 179 59.2
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 2.0e-50 203.0 175 60.0
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 1.3e-49 200.3 177 61.6
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 4.8e-49 198.4 176 61.4
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 8.2e-49 197.6 148 64.2
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 8.2e-49 197.6 170 59.4
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 5.3e-48 194.9 180 56.7
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 2.0e-47 193.0 150 63.3
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 1.0e-46 190.7 182 57.1
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.3e-46 190.3 145 63.4
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 1.7e-46 189.9 141 63.1
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.9e-46 189.1 172 57.0
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 5.0e-46 188.3 142 65.5
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 8.5e-46 187.6 150 60.0
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 8.5e-46 187.6 152 63.8
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.1e-45 187.2 144 65.3
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.1e-45 187.2 136 66.2
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 1.5e-45 186.8 181 57.5
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 2.5e-45 186.0 178 55.1
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 4.2e-45 185.3 178 57.3
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 4.2e-45 185.3 177 54.8
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 7.2e-45 184.5 181 56.9
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 7.2e-45 184.5 181 56.9
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 1.6e-44 183.3 149 60.4
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 2.1e-44 183.0 181 56.4
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 3.6e-44 182.2 177 54.2
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 3.6e-44 182.2 150 58.0
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 3.6e-44 182.2 177 54.2
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 6.1e-44 181.4 137 64.2
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 8.0e-44 181.0 150 58.7
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 6.7e-43 177.9 148 60.8
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 6.7e-43 177.9 152 59.2
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.0e-42 176.4 150 57.3
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 3.3e-42 175.6 147 61.2
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 5.7e-42 174.9 181 52.5
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 4.8e-41 171.8 199 51.3
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 6.3e-41 171.4 150 57.3
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 1.2e-39 167.2 178 52.2
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.0e-39 166.4 124 65.3
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 2.7e-39 166.0 184 52.2
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 7.7e-39 164.5 123 64.2
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 5.0e-38 161.8 150 52.7
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 6.5e-38 161.4 135 60.7
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 2.0e-34 149.8 122 57.4
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 2.2e-33 146.4 124 59.7
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 1.7e-30 136.7 119 56.3
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 8.6e-30 134.4 146 48.6
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 1.9e-29 133.3 110 58.2
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 5.5e-29 131.7 88 67.0
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 9.5e-29 131.0 110 57.3
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 4.7e-28 128.6 149 43.0
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 6.1e-28 128.3 119 58.8
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.5e-26 123.6 100 72.0
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 6.3e-25 118.2 114 54.4
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.5e-23 112.1 124 50.0
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 3.8e-22 109.0 105 49.5
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 3.6e-20 102.4 85 61.2
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 3.6e-20 102.4 100 51.0
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 4.1e-16 89.0 167 34.7
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 4.6e-15 85.5 61 63.9
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.1e-13 80.9 123 35.8
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 2.8e-12 76.3 92 45.7
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 3.1e-11 72.8 110 35.5


User provided reference genes

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