Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0846 Vigna mungo HOM05D006292 ORTHO05D006110 1.4e-55 219.5 128 100.0
Phvul.002G141600 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 3.6e-38 161.8 129 65.9
Glyma.09G204400 Glycine max HOM05D006292 ORTHO05D006110 2.5e-31 139.0 123 60.2
Glyma.01G018500 Glycine max HOM05D006292 ORTHO05D006110 3.9e-29 131.7 125 58.4
Ca_06080_v3 Cicer arietinum L. HOM05D006292 ORTHO05D006110 1.8e-26 122.9 124 50.0
Lj2g0014920 Lotus japonicus HOM05D006292 ORTHO05D006110 2.2e-24 115.9 132 50.0
Lalb_Chr05g0216081 Lupinus albus HOM05D006292 ORTHO05D006110 3.8e-24 115.2 127 51.2
Lalb_Chr09g0325661 Lupinus albus HOM05D006292 ORTHO05D006110 8.5e-24 114.0 124 51.6
Medtr5g030470 Medicago truncatula HOM05D006292 ORTHO05D006110 3.6e-22 108.6 124 47.6
Lalb_Chr16g0381361 Lupinus albus HOM05D006292 ORTHO05D006110 6.1e-22 107.8 124 50.8
TPR.G3912 Trifolium pratense HOM05D006292 ORTHO05D006110 6.7e-21 104.4 119 46.2
Psat2g135960 Pisum sativum HOM05D006292 ORTHO05D006110 2.6e-20 102.4 125 45.6
Glyma.03G113900 Glycine max HOM05D006292 ORTHO05D006110 3.4e-12 75.5 128 39.1
Glyma.07G112800 Glycine max HOM05D006292 ORTHO05D006110 4.4e-12 75.1 127 40.2
CSS0029921 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 7.5e-12 74.3 125 36.8
CSS0047178 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 7.5e-12 74.3 125 36.8
RcHm_v2.0_Chr7g0209741 Rosa chinensis HOM05D006292 ORTHO05D006110 3.7e-11 72.0 125 40.0
arahy.Tifrunner.gnm1.ann1.L0PZ9J Arachis hypogaea HOM05D006292 ORTHO05D006110 6.3e-11 71.2 118 41.5
arahy.Tifrunner.gnm1.ann1.RC41H8 Arachis hypogaea HOM05D006292 ORTHO05D006110 6.3e-11 71.2 118 41.5
FvH4_5g22090 Fragaria vesca HOM05D006292 ORTHO05D006110 6.3e-11 71.2 125 39.2
Manes.15G181600 Manihot esculenta HOM05D006292 ORTHO05D006110 6.3e-11 71.2 120 39.2
Cpa.g.sc1778.1 Carica papaya HOM05D006292 ORTHO05D006110 8.3e-11 70.9 129 40.3
arahy.Tifrunner.gnm1.ann1.92QZ6T Arachis hypogaea HOM05D006292 ORTHO05D006110 1.8e-10 69.7 128 36.7
arahy.Tifrunner.gnm1.ann1.46AG3A Arachis hypogaea HOM05D006292 ORTHO05D006110 4.1e-10 68.6 128 35.9
TPR.G28248 Trifolium pratense HOM05D006292 ORTHO05D006110 4.1e-10 68.6 124 36.3
Rhsim07G0127000 Rhododendron simsii HOM05D006292 ORTHO05D006110 1.2e-09 67.0 131 36.6
TWI60G0215 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 1.6e-09 66.6 124 39.5
FAN13G0922 Fragaria x ananassa HOM05D006292 ORTHO05D006110 2.0e-09 66.2 125 37.6
Phvul.010G051800 Phaseolus vulgaris HOM05D006292 ORTHO05D006110 4.5e-09 65.1 123 34.1
Ciclev10013401m.g Citrus clementina HOM05D006292 ORTHO05D006110 1.0e-08 63.9 125 36.8
CSS0025259 Camellia sinensis var. sinensis HOM05D006292 ORTHO05D006110 1.3e-08 63.5 122 34.4
MD16G1274300 Malus domestica HOM05D006292 ORTHO05D006110 1.3e-08 63.5 126 37.3
Potri.003G092100 Populus trichocarpa HOM05D006292 ORTHO05D006110 1.3e-08 63.5 119 38.7
Thecc.03G227700 Theobroma cacao HOM05D006292 ORTHO05D006110 1.3e-08 63.5 128 35.2
TWI81G0365 Tripterygium wilfordii HOM05D006292 ORTHO05D006110 1.7e-08 63.2 123 36.6
Psat4g118000 Pisum sativum HOM05D006292 ORTHO05D006110 2.2e-08 62.8 130 39.2
Prupe.5G036400 Prunus persica HOM05D006292 ORTHO05D006110 2.2e-08 62.8 126 35.7
Medtr8g067270 Medicago truncatula HOM05D006292 ORTHO05D006110 2.9e-08 62.4 74 50.0
Lj4g0026533 Lotus japonicus HOM05D006292 ORTHO05D006110 3.8e-08 62.0 124 35.5
Sopen06g021400 Solanum pennellii HOM05D006292 ORTHO05D006110 3.8e-08 62.0 126 35.7
FAN08G0524 Fragaria x ananassa HOM05D006292 ORTHO05D006110 5.0e-08 61.6 74 45.9
FAN18G1495 Fragaria x ananassa HOM05D006292 ORTHO05D006110 5.0e-08 61.6 74 45.9
Hma1.2p1_1063F.1_g253570 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 5.0e-08 61.6 128 34.4
Peaxi162Scf00045g00010 Petunia axillaris HOM05D006292 ORTHO05D006110 5.0e-08 61.6 121 35.5
Hma1.2p1_2704F.1_g327130 Hydrangea macrophylla HOM05D006292 ORTHO05D006110 8.5e-08 60.8 128 34.4
Potri.001G142250 Populus trichocarpa HOM05D006292 ORTHO05D006110 8.5e-08 60.8 119 35.3
FAN04G1003 Fragaria x ananassa HOM05D006292 ORTHO05D006110 1.5e-07 60.1 74 44.6
Sed0015746 Sechium edule HOM05D006292 ORTHO05D006110 3.2e-07 58.9 120 35.8
CARHR129380 Cardamine hirsuta HOM05D006292 ORTHO05D006110 4.2e-07 58.5 124 37.1
COL.COLO4_17031 Corchorus olitorius HOM05D006292 ORTHO05D006110 4.2e-07 58.5 125 33.6
CiPaw.12G063900 Carya illinoinensis HOM05D006292 ORTHO05D006110 5.5e-07 58.2 130 31.5
EL10Ac5g12118 Beta vulgaris HOM05D006292 ORTHO05D006110 7.2e-07 57.8 80 43.8
Duzib068G0707 Durio zibethinus HOM05D006292 ORTHO05D006110 1.6e-06 56.6 78 38.5
PGSC0003DMG400001160 Solanum tuberosum HOM05D006292 ORTHO05D006110 1.6e-06 56.6 125 34.4
Duzib205G0138 Durio zibethinus HOM05D006292 ORTHO05D006110 2.7e-06 55.8 135 31.9
Aa31LG9G15250 Aethionema arabicum HOM05D006292 ORTHO05D006110 4.7e-06 55.1 62 41.9
Actinidia14806 Actinidia chinensis HOM05D000567 ORTHO05D000767 8.0e-06 54.3 74 36.5


User provided reference genes

Program Settings