Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0714 Vigna mungo HOM05D003638 ORTHO05D003202 1.3e-79 299.7 153 100.0
Phvul.003G174500 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 4.6e-32 141.7 109 74.3
VMungo0540G1931 Vigna mungo HOM05D003638 ORTHO05D003202 8.0e-29 131.0 101 74.3
Glyma.17G105300 Glycine max HOM05D003638 ORTHO05D003202 5.8e-19 98.2 103 58.3
Psat1g023080 Pisum sativum HOM05D003638 ORTHO05D003202 1.1e-12 77.4 93 51.6
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 1.4e-12 77.0 99 48.5
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 2.3e-12 76.3 103 49.5
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 4.0e-12 75.5 98 46.9
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 1.2e-11 73.9 99 48.5
Oeu055917.1 Olea europaea HOM05D003638 ORTHO05D003202 1.2e-11 73.9 88 51.1
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 1.5e-11 73.6 88 53.4
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 2.0e-11 73.2 97 49.5
TPR.G15775 Trifolium pratense HOM05D003638 ORTHO05D003202 2.0e-11 73.2 100 48.0
Lalb_Chr08g0233671 Lupinus albus HOM05D003638 ORTHO05D003202 2.6e-11 72.8 99 47.5
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 3.4e-11 72.4 94 48.9
GSVIVG01012890001 Vitis vinifera HOM05D003638 ORTHO05D003202 3.4e-11 72.4 107 43.9
Medtr4g116480 Medicago truncatula HOM05D003638 ORTHO05D003202 2.2e-10 69.7 93 46.2
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 2.2e-10 69.7 97 48.5
Lalb_Chr08g0233781 Lupinus albus HOM05D003638 ORTHO05D003202 3.8e-10 68.9 98 49.0
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 3.8e-10 68.9 98 48.0
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 3.8e-10 68.9 94 45.7
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 4.9e-10 68.6 94 45.7
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 6.4e-10 68.2 94 45.7
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 8.4e-10 67.8 101 45.5
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.1e-09 67.4 94 45.7
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 1.4e-09 67.0 100 43.0
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.4e-09 67.0 93 43.0
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 1.9e-09 66.6 96 42.7
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 1.9e-09 66.6 98 41.8
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 3.2e-09 65.9 96 45.8
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 3.2e-09 65.9 101 42.6
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 4.1e-09 65.5 94 44.7
Haze_19322 Corylus avellana HOM05D003638 ORTHO05D003202 5.4e-09 65.1 90 45.6
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 5.4e-09 65.1 88 45.5
Nitab4.5_0001021g0070 Nicotiana tabacum HOM05D003638 ORTHO05D003202 5.4e-09 65.1 101 43.6
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 7.1e-09 64.7 97 48.5
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 7.1e-09 64.7 93 46.2
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 9.2e-09 64.3 94 43.6
arahy.Tifrunner.gnm1.ann1.80FEVW Arachis hypogaea HOM05D003638 ORTHO05D003202 1.2e-08 63.9 98 41.8
HanXRQChr05g0137981 Helianthus annuus HOM05D003638 ORTHO05D003202 1.2e-08 63.9 88 48.9
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 2.1e-08 63.2 100 44.0
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 2.1e-08 63.2 102 42.2
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 2.1e-08 63.2 105 44.8
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.1e-08 63.2 100 45.0
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.1e-08 63.2 100 45.0
Lj4g0017179 Lotus japonicus HOM05D053320 ORTHO05D003202 2.7e-08 62.8 88 45.5
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 3.5e-08 62.4 104 39.4
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 3.5e-08 62.4 93 46.2
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 3.5e-08 62.4 88 43.2
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 4.6e-08 62.0 92 44.6
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 4.6e-08 62.0 100 46.0
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 4.6e-08 62.0 100 46.0
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 4.6e-08 62.0 100 46.0
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 4.6e-08 62.0 91 44.0
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 6.0e-08 61.6 98 42.9
Psat4g033360 Pisum sativum HOM05D003638 ORTHO05D003202 7.8e-08 61.2 108 43.5
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.0e-07 60.8 104 42.3
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 1.0e-07 60.8 97 42.3
arahy.Tifrunner.gnm1.ann1.V8YXJU Arachis hypogaea HOM05D003638 ORTHO05D003202 1.0e-07 60.8 103 41.7
ECA236G1572 Erigeron canadensis HOM05D003638 ORTHO05D003202 1.0e-07 60.8 88 43.2
Gohir.A06G050200 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.0e-07 60.8 99 40.4
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 1.3e-07 60.5 101 42.6
Psat4g033320 Pisum sativum HOM05D003638 ORTHO05D003202 1.3e-07 60.5 99 45.5
Gorai.010G056400 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.7e-07 60.1 99 40.4
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 2.3e-07 59.7 87 43.7
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.3e-07 59.7 102 43.1
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.3e-07 59.7 102 43.1
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 2.3e-07 59.7 100 43.0
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 2.3e-07 59.7 99 42.4
arahy.Tifrunner.gnm1.ann1.S7JRIG Arachis hypogaea HOM05D003638 ORTHO05D003202 3.0e-07 59.3 103 40.8
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 3.0e-07 59.3 96 40.6
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 3.9e-07 58.9 100 43.0
Sopen06g024020 Solanum pennellii HOM05D003638 ORTHO05D003202 3.9e-07 58.9 98 40.8
PGSC0003DMG402030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 3.9e-07 58.9 98 38.8
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 5.1e-07 58.5 96 40.6
Nitab4.5_0007535g0020 Nicotiana tabacum HOM05D003638 ORTHO05D003202 5.1e-07 58.5 104 39.4
Solyc07g007170.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 5.1e-07 58.5 98 40.8
Sopen07g003220 Solanum pennellii HOM05D003638 ORTHO05D003202 6.6e-07 58.2 98 40.8
HanXRQChr10g0315321 Helianthus annuus HOM05D003638 ORTHO05D003202 8.6e-07 57.8 104 32.7
arahy.Tifrunner.gnm1.ann1.Y03F6U Arachis hypogaea HOM05D003638 ORTHO05D003202 1.5e-06 57.0 111 37.8
ClCG06G012030 Citrullus lanatus HOM05D003638 ORTHO05D003202 1.5e-06 57.0 94 38.3
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.5e-06 57.0 97 40.2
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 1.5e-06 57.0 102 37.3
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 1.5e-06 57.0 93 44.1
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 1.9e-06 56.6 103 37.9
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 1.9e-06 56.6 93 45.2
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 1.9e-06 56.6 100 40.0
MSTRG.26318 Avicennia marina HOM05D003638 ORTHO05D003202 2.5e-06 56.2 89 40.4
Cfa020895 Carpinus fangiana HOM05D003638 ORTHO05D003202 2.5e-06 56.2 93 40.9
CiPaw.15G182700 Carya illinoinensis HOM05D003638 ORTHO05D003202 2.5e-06 56.2 92 42.4
Migut.K00380 Erythranthe guttata HOM05D003638 ORTHO05D003202 2.5e-06 56.2 96 40.6
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 2.5e-06 56.2 95 41.1
Eucgr.C04088 Eucalyptus grandis HOM05D003638 ORTHO05D003202 3.3e-06 55.8 86 43.0
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 5.6e-06 55.1 95 43.2
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 7.3e-06 54.7 101 40.6
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 9.6e-06 54.3 83 48.2
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 9.6e-06 54.3 88 42.0


User provided reference genes

Program Settings