Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 9.5e-74 280.0 135 100.0
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 9.2e-61 236.9 195 64.6
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 4.3e-58 228.0 195 62.6
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 9.5e-58 226.9 195 62.1
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 4.6e-52 208.0 195 59.0
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.7e-51 206.1 183 61.2
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 3.0e-51 205.3 195 57.9
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.5e-50 203.0 196 57.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.6e-50 201.1 196 57.1
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 3.5e-44 181.8 183 55.2
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 5.1e-43 177.9 190 52.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.1e-43 177.9 190 51.6
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 5.1e-43 177.9 190 52.1
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 5.1e-43 177.9 190 52.1
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.5e-42 176.4 190 51.1
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.5e-42 176.4 190 52.1
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.5e-42 175.6 196 50.5
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.3e-42 174.9 194 53.6
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 7.3e-42 174.1 190 51.1
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 9.5e-42 173.7 190 51.1
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.2e-41 173.3 190 52.1
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 2.1e-41 172.6 191 52.9
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 3.6e-41 171.8 190 50.5
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.6e-41 171.8 200 52.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 6.2e-41 171.0 190 50.5
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 8.1e-41 170.6 190 50.5
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.4e-40 169.9 190 48.4
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.4e-40 169.9 191 51.8
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 1.4e-40 169.9 190 48.9
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.3e-40 169.1 181 52.5
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 5.2e-40 167.9 190 48.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 8.9e-40 167.2 200 50.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.5e-39 166.4 190 50.5
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 2.0e-39 166.0 190 50.0
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.0e-39 166.0 190 50.0
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 5.8e-39 164.5 192 53.1
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.7e-38 162.9 191 50.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.2e-38 162.5 190 49.5
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.2e-38 162.5 192 49.0
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.9e-38 162.2 192 49.0
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.4e-38 161.0 190 48.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 6.4e-38 161.0 190 48.9
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.1e-37 160.2 190 50.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.4e-37 159.8 190 46.8
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 3.2e-37 158.7 191 50.8
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 5.4e-37 157.9 191 46.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 5.4e-37 157.9 192 51.0
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.2e-36 156.8 184 47.3
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.6e-36 156.4 190 47.9
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.6e-36 156.4 190 48.4
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 6.0e-36 154.5 190 49.5
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 6.0e-36 154.5 181 47.5
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 6.0e-36 154.5 188 47.9
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.3e-35 152.5 175 49.7
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 3.0e-35 152.1 193 47.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.0e-35 152.1 190 46.8
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.0e-35 152.1 194 47.4
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 5.1e-35 151.4 190 46.3
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 8.6e-35 150.6 195 48.2
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.5e-34 149.1 184 46.2
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.5e-34 149.1 190 46.3
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 2.5e-34 149.1 190 46.3
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.5e-34 149.1 190 46.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.3e-34 148.7 190 47.4
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 7.3e-34 147.5 195 47.7
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.1e-33 146.0 193 46.6
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.8e-33 145.6 184 47.8
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 3.6e-33 145.2 189 48.1
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.7e-33 144.8 191 47.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.7e-33 144.8 191 47.1
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 8.1e-33 144.1 157 52.2
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.1e-32 143.7 190 45.3
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.4e-32 143.3 252 37.7
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.4e-32 143.3 193 46.6
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.1e-32 142.1 190 46.3
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.2e-32 141.4 181 45.9
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 6.9e-32 141.0 183 45.4
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 6.9e-32 141.0 181 45.9
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.5e-31 139.8 193 44.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.5e-31 139.8 191 48.2
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.4e-31 138.7 181 45.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 4.4e-31 138.3 181 44.2
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.7e-30 136.3 224 40.2
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.2e-30 136.0 189 46.0
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.2e-30 136.0 189 46.0
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 3.8e-30 135.2 190 43.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 4.9e-30 134.8 183 44.3
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.4e-30 134.4 189 45.5
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.4e-30 134.0 189 45.5
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.9e-29 132.9 192 45.3
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 1.0e-27 127.1 97 64.9
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.7e-27 126.3 160 48.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.3e-27 125.9 87 72.4
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.0e-27 125.6 181 43.6
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 3.0e-27 125.6 159 47.2
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 3.9e-27 125.2 92 67.4
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.3e-26 122.1 190 44.2
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 6.2e-25 117.9 89 66.3
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.2e-23 113.6 87 60.9
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 5.8e-23 111.3 148 43.9
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 7.6e-23 110.9 161 42.2
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-22 110.2 109 53.2
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 3.8e-22 108.6 95 63.2
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 2.4e-21 105.9 186 38.2
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.2e-21 105.5 105 54.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.8e-19 99.8 89 61.8
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 8.1e-17 90.9 75 58.7
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.1e-16 89.0 189 36.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.0e-15 86.3 66 69.7
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.3e-11 73.6 132 34.1
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.7e-11 70.9 48 68.8
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 9.6e-10 67.4 161 30.4
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 2.8e-09 65.9 163 27.6
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.8e-08 63.2 49 65.3
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 6.9e-08 61.2 50 68.0
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 7.6e-07 57.8 46 67.4
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-06 57.0 37 73.0
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.9e-06 55.8 47 66.0


User provided reference genes

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