Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 8.2e-277 956.4 490 100.0
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 7.5e-254 880.2 490 91.2
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.7e-234 815.8 500 85.4
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.6e-232 809.3 494 82.0
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 6.2e-200 701.0 494 71.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.1e-192 676.0 488 69.7
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.5e-190 669.8 502 70.5
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.3e-184 650.2 493 71.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.1e-183 645.6 496 70.8
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.0e-181 640.6 493 69.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.5e-166 588.6 497 61.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 3.8e-165 585.5 497 60.6
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 2.3e-162 576.2 443 63.2
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 6.7e-162 574.7 476 60.1
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.3e-161 572.4 458 61.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 8.2e-160 567.8 513 58.3
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.0e-158 563.1 428 64.3
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.5e-158 562.4 499 59.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.0e-157 560.8 499 61.5
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 6.5e-157 558.1 488 57.8
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.1e-156 557.4 486 58.0
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.5e-156 557.0 441 60.8
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 3.2e-156 555.8 428 63.6
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 4.2e-156 555.4 477 62.7
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.0e-154 550.8 496 56.2
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 8.8e-154 547.7 492 57.3
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.2e-153 547.4 478 61.7
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 4.4e-153 545.4 436 60.8
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.8e-152 542.7 427 61.8
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 1.1e-151 540.8 484 57.6
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 3.1e-151 539.3 450 58.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.4e-151 538.5 433 60.3
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.4e-151 538.5 433 60.3
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.6e-150 537.0 387 66.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.7e-150 536.2 440 60.5
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.7e-150 536.2 495 56.4
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 7.7e-150 534.6 506 56.5
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.3e-149 533.9 440 60.5
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.9e-149 532.7 496 56.9
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.2e-148 529.3 387 64.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 4.2e-148 528.9 363 68.0
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 4.2e-148 528.9 387 64.9
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 6.1e-147 525.0 433 59.1
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.8e-146 521.5 467 57.2
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 6.8e-146 521.5 440 59.3
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 6.8e-146 521.5 392 65.1
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.2e-145 520.8 498 58.6
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 3.4e-145 519.2 499 53.5
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 7.5e-145 518.1 375 66.1
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.8e-143 513.5 474 55.3
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.1e-143 512.7 372 64.0
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.6e-142 510.4 458 55.5
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 5.0e-141 505.4 449 56.6
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-140 503.8 448 56.7
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 2.1e-139 500.0 478 54.2
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 8.0e-139 498.0 478 54.0
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.0e-138 496.1 448 55.6
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 6.8e-138 495.0 473 55.2
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 2.6e-137 493.0 398 61.3
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 2.6e-137 493.0 425 57.2
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 9.8e-137 491.1 449 55.9
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 9.8e-137 491.1 449 55.9
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 8.3e-136 488.0 377 59.2
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.4e-135 487.3 378 62.2
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 1.4e-135 487.3 462 53.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.4e-135 487.3 429 54.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.4e-135 486.5 459 55.3
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.2e-134 484.2 381 61.7
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.6e-134 483.8 379 61.7
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.0e-133 481.1 391 60.1
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.3e-133 480.7 492 52.4
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 3.9e-133 479.2 378 61.6
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.9e-133 479.2 382 59.4
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 3.9e-133 479.2 435 55.6
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.3e-132 475.7 432 55.6
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.3e-132 475.7 487 51.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 5.6e-132 475.3 390 60.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 7.3e-132 474.9 374 60.7
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 7.3e-132 474.9 375 60.5
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.2e-131 474.2 389 59.9
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.6e-131 473.8 392 59.4
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.6e-131 473.8 392 59.4
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.6e-131 473.8 392 59.4
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.6e-131 473.8 492 51.8
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 2.8e-131 473.0 387 59.7
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.8e-130 470.3 492 51.6
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.3e-130 469.9 377 58.9
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 4.0e-130 469.2 380 60.8
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 2.0e-129 466.8 387 60.2
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 9.8e-129 464.5 387 59.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.3e-128 464.2 373 60.6
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.9e-127 460.3 378 60.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.4e-127 459.9 393 58.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.2e-126 457.6 361 61.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.7e-123 445.7 388 55.7
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.1e-122 444.5 372 59.1
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.1e-117 425.6 384 53.6
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.8e-113 412.1 480 46.5
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.3e-101 373.6 391 47.3
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-95 353.6 426 46.0
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.3e-93 347.8 328 55.2
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.4e-79 301.2 389 43.4
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.9e-79 300.8 339 50.1
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.7e-76 289.3 294 51.0
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 8.2e-75 285.4 382 44.8
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 6.9e-74 282.3 207 62.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 2.3e-69 267.3 394 39.6
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.5e-68 263.8 462 36.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 3.8e-56 223.4 310 40.3
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 6.1e-54 216.1 404 36.4
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.1e-34 152.1 180 50.0
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.4e-34 151.8 230 41.3
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 2.7e-33 147.5 112 64.3
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.6e-28 131.0 129 52.7
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.6e-28 131.0 377 30.2
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.0e-26 122.9 372 28.2
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.8e-24 117.1 381 27.6
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.6e-22 110.5 332 30.1
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.2e-20 105.5 53 84.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.7e-19 100.5 227 34.8
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 4.3e-07 60.5 38 63.2


User provided reference genes

Program Settings