Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 7.5e-74 280.4 140 100.0
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 2.7e-63 245.4 141 88.7
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 9.6e-45 183.7 143 71.3
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 4.7e-44 181.4 149 66.4
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 3.8e-41 171.8 146 69.2
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 2.4e-40 169.1 162 61.7
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 6.0e-39 164.5 148 63.5
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 1.0e-38 163.7 166 59.0
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 1.7e-38 162.9 145 62.1
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 2.3e-38 162.5 142 60.6
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 3.9e-38 161.8 148 61.5
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 5.1e-38 161.4 151 57.0
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 6.6e-38 161.0 163 55.8
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 7.3e-37 157.5 154 57.1
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 9.6e-37 157.1 147 59.2
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 9.6e-37 157.1 133 61.7
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 1.3e-36 156.8 164 55.5
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 1.6e-36 156.4 141 61.0
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 1.6e-36 156.4 139 63.3
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 1.6e-36 156.4 145 60.0
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.6e-36 156.4 141 58.2
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 2.8e-36 155.6 150 58.0
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 2.8e-36 155.6 147 58.5
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 2.8e-36 155.6 151 57.0
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 2.8e-36 155.6 148 58.1
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 3.6e-36 155.2 148 58.1
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 3.6e-36 155.2 153 59.5
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 6.2e-36 154.5 143 61.5
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 6.2e-36 154.5 148 61.5
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 8.1e-36 154.1 147 58.5
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 8.1e-36 154.1 151 57.6
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.1e-35 153.7 152 57.9
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 1.4e-35 153.3 152 53.3
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 1.8e-35 152.9 145 60.0
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 3.1e-35 152.1 151 58.3
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 5.3e-35 151.4 151 57.0
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 6.9e-35 151.0 152 55.9
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 9.0e-35 150.6 145 60.0
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.2e-34 150.2 151 57.0
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 2.0e-34 149.4 150 57.3
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.5e-34 148.3 148 57.4
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 5.8e-34 147.9 148 56.1
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 7.6e-34 147.5 141 60.3
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 7.6e-34 147.5 153 58.2
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 7.6e-34 147.5 153 58.2
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 9.9e-34 147.1 149 55.7
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.3e-33 146.7 172 51.2
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.7e-33 146.4 148 56.8
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 2.9e-33 145.6 150 54.0
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 4.9e-33 144.8 149 55.0
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 4.9e-33 144.8 142 60.6
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 1.1e-32 143.7 147 60.5
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.4e-32 143.3 158 53.2
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.4e-32 143.3 141 56.7
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.9e-32 142.9 157 52.2
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 2.4e-32 142.5 161 53.4
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 3.2e-32 142.1 144 54.2
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 7.1e-32 141.0 153 54.2
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 9.3e-32 140.6 149 53.7
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 2.1e-31 139.4 151 53.0
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 3.5e-31 138.7 153 53.6
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 4.6e-31 138.3 151 52.3
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 6.0e-31 137.9 89 78.7
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 7.9e-31 137.5 152 52.6
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 1.0e-30 137.1 150 54.0
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 1.8e-30 136.3 154 51.9
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 1.8e-30 136.3 151 52.3
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 2.3e-30 136.0 151 52.3
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 3.9e-30 135.2 139 51.8
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 5.1e-30 134.8 147 53.7
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 6.7e-30 134.4 149 52.3
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 1.5e-29 133.3 147 55.1
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 4.3e-29 131.7 126 57.9
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 1.6e-28 129.8 147 52.4
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 2.1e-28 129.4 125 57.6
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 2.8e-28 129.0 175 46.3
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 4.8e-28 128.3 126 56.3
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 8.1e-28 127.5 125 56.8
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 5.3e-27 124.8 153 51.6
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 5.3e-27 124.8 91 68.1
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 9.0e-27 124.0 179 47.5
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 4.5e-26 121.7 156 46.8
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 7.6e-26 120.9 150 48.0
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 7.6e-26 120.9 101 62.4
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 1.3e-25 120.2 92 60.9
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 2.9e-25 119.0 151 47.7
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 3.8e-25 118.6 89 64.0
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 4.9e-25 118.2 147 51.0
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 4.9e-25 118.2 147 51.0
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 1.1e-24 117.1 91 61.5
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 3.2e-24 115.5 81 72.8
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 5.5e-24 114.8 92 60.9
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 7.1e-24 114.4 104 56.7
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 2.7e-23 112.5 86 64.0
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 4.6e-23 111.7 96 58.3
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 1.8e-22 109.8 82 65.9
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 3.0e-22 109.0 118 50.8
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 3.0e-22 109.0 83 65.1
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 5.1e-22 108.2 85 63.5
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 5.1e-22 108.2 123 56.9
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 4.3e-21 105.1 90 55.6
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 8.1e-20 100.9 101 50.5
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 4.0e-19 98.6 83 57.8
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 4.2e-16 88.6 136 39.7
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 2.1e-15 86.3 100 44.0
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 1.9e-13 79.7 64 60.9
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 6.9e-11 71.2 78 43.6
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.6e-10 69.3 93 40.9
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 3.8e-09 65.5 78 46.2
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 1.1e-08 63.9 91 36.3
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.1e-08 63.9 75 49.3
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.1e-08 63.9 75 49.3
Aa31LG2G21740 Aethionema arabicum HOM05D000117 ORTHO05D000070 9.3e-08 60.8 125 33.6
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 3.6e-07 58.9 82 36.6
arahy.Tifrunner.gnm1.ann1.LI3NQ1 Arachis hypogaea HOM05D000117 ORTHO05D000070 7.9e-07 57.8 115 32.2
THA.LOC104804036 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 1.3e-06 57.0 78 39.7
THA.LOC104814530 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 1.3e-06 57.0 122 30.3
Gohir.D09G228200 Gossypium hirsutum HOM05D000117 ORTHO05D000070 3.9e-06 55.5 76 39.5
SMO137G0202 Selaginella moellendorffii HOM05D000117 ORTHO05D000070 3.9e-06 55.5 78 39.7
ATR0980G004 Amborella trichopoda HOM05D000117 ORTHO05D000070 5.1e-06 55.1 73 42.5
MBI19_g04829_MAGBIO Magnolia biondii HOM05D000117 ORTHO05D000070 6.7e-06 54.7 71 40.8
Gorai.006G250900 Gossypium raimondii HOM05D000117 ORTHO05D000070 8.7e-06 54.3 76 38.2
Lsat_1_v5_gn_8_91000 Lactuca sativa HOM05D000117 ORTHO05D000070 8.7e-06 54.3 73 37.0


User provided reference genes

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