Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.5e-172 607.8 305 100.0
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 7.5e-111 404.4 212 93.9
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 4.9e-110 401.7 213 93.9
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.3e-107 393.7 202 97.0
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 3.6e-105 385.6 202 94.6
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.0e-100 369.8 203 91.6
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.7e-100 369.4 202 91.1
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 3.5e-100 369.0 201 91.0
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 4.6e-100 368.6 211 87.2
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 6.0e-100 368.2 206 90.3
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 1.3e-99 367.1 203 89.2
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.3e-99 367.1 204 89.2
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.0e-99 365.9 218 84.9
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 3.0e-99 365.9 201 90.5
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 6.6e-99 364.8 204 89.2
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 6.6e-99 364.8 203 89.2
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.5e-98 362.8 210 86.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 2.5e-98 362.8 204 90.2
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.5e-98 362.8 204 90.2
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 3.3e-98 362.5 203 88.2
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.3e-98 362.5 201 90.0
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 4.3e-98 362.1 240 77.9
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.2e-97 360.5 231 79.2
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.8e-97 359.4 205 88.3
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.6e-97 359.0 201 89.1
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 3.6e-97 359.0 201 88.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-96 357.5 215 85.6
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-96 357.5 215 85.6
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.4e-96 357.1 201 88.6
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 3.1e-96 355.9 217 84.3
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 6.8e-96 354.8 223 81.6
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 6.8e-96 354.8 210 86.2
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 6.8e-96 354.8 240 76.2
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 8.9e-96 354.4 240 76.2
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.5e-95 353.6 204 88.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.0e-95 353.2 240 75.8
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 4.4e-95 352.1 205 85.9
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 5.8e-95 351.7 205 87.8
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 5.8e-95 351.7 238 76.1
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 7.5e-95 351.3 221 81.4
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 7.5e-95 351.3 223 80.7
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 3.7e-94 349.0 191 92.1
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 4.9e-94 348.6 200 90.0
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 6.4e-94 348.2 238 75.6
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 8.3e-94 347.8 214 83.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 8.3e-94 347.8 230 79.1
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 8.3e-94 347.8 201 86.6
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.1e-93 347.4 201 84.6
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.1e-93 347.4 201 84.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 2.4e-93 346.3 206 86.4
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.7e-92 342.8 230 78.3
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.7e-91 340.1 201 85.1
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 5.1e-91 338.6 197 84.8
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 6.6e-91 338.2 197 85.8
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.6e-91 337.8 213 83.1
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 8.6e-91 337.8 213 83.1
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.5e-90 337.0 192 90.6
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 2.5e-90 336.3 201 85.1
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 5.6e-90 335.1 215 80.5
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 9.5e-90 334.3 210 79.0
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.6e-89 333.6 198 83.8
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.6e-89 333.6 231 73.2
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 2.1e-89 333.2 212 80.7
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 8.1e-89 331.3 210 82.4
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.1e-88 330.9 225 76.0
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 7.6e-87 324.7 202 80.2
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.4e-85 320.5 199 80.9
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.0e-84 315.1 204 79.9
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 6.0e-84 315.1 204 79.9
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.6e-81 307.0 201 73.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 3.1e-80 302.8 201 71.1
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.1e-80 302.8 219 72.1
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.2e-79 300.8 201 77.6
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 2.0e-79 300.1 205 73.7
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 1.1e-77 294.3 205 74.1
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.1e-77 294.3 203 74.9
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.2e-77 292.7 220 71.8
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 9.3e-77 291.2 220 70.9
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.2e-76 290.8 202 72.8
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 3.5e-76 289.3 214 69.2
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 5.1e-75 285.4 205 69.8
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.6e-73 280.4 204 74.0
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 1.4e-69 267.3 181 77.3
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.0e-67 259.6 217 65.4
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.5e-66 256.5 232 60.8
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 6.2e-65 251.9 165 79.4
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 2.0e-63 246.9 139 89.9
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 4.9e-62 242.3 234 55.1
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 3.5e-60 236.1 150 78.0
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.1e-56 224.6 191 66.0
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.7e-52 209.9 205 52.2
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.7e-49 199.5 219 52.5
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 1.4e-48 197.6 205 51.2
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.5e-47 194.1 106 88.7
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 7.2e-29 132.1 81 79.0
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 8.5e-22 108.6 122 54.1
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.4e-16 90.5 199 33.2
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 2.1e-12 77.4 107 45.8
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 3.5e-07 60.1 44 65.9


User provided reference genes

Program Settings