Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 0.0e+00 1361.7 776 100.0
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 3.1e-310 1068.1 657 87.4
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.6e-306 1055.8 653 86.2
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.1e-254 882.1 659 73.4
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 3.2e-251 872.1 645 73.3
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.8e-249 866.3 644 72.4
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.6e-242 843.2 650 70.9
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.7e-242 842.4 643 71.1
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 5.4e-238 828.2 644 69.9
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 7.5e-208 728.0 649 62.6
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 6.0e-205 718.4 652 61.5
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 8.6e-204 714.5 646 61.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.5e-203 713.0 650 61.4
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 9.5e-203 711.1 648 61.6
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 5.2e-201 705.3 650 59.8
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.5e-200 703.7 645 60.9
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 7.6e-200 701.4 645 60.9
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 8.4e-199 698.0 648 61.0
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.1e-197 693.3 646 60.7
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 8.6e-196 688.0 642 59.5
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 3.1e-193 679.5 648 59.1
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.0e-192 676.8 663 59.1
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.6e-192 676.4 663 59.0
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.6e-192 676.4 651 57.3
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 7.6e-192 674.9 648 59.0
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-190 671.0 648 58.2
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 4.2e-190 669.1 672 56.2
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.6e-189 667.2 648 57.9
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 7.8e-189 664.8 651 57.5
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.3e-188 664.1 657 58.1
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 6.6e-188 661.8 592 70.6
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 8.7e-188 661.4 680 55.0
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 9.0e-185 651.4 631 58.3
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 2.0e-184 650.2 632 57.8
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.2e-183 646.7 666 55.0
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.2e-183 646.7 666 55.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 6.0e-181 638.6 654 54.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.0e-180 637.9 710 52.7
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 8.7e-180 634.8 635 58.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.9e-179 633.6 649 56.9
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 8.1e-178 628.2 666 56.5
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.8e-177 627.1 615 56.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 5.3e-177 625.5 644 55.0
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 6.9e-177 625.2 651 53.9
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 4.5e-176 622.5 477 70.6
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 1.6e-173 614.0 643 56.6
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.5e-171 607.4 643 55.8
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.6e-171 605.5 789 47.4
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 2.1e-170 603.6 518 63.7
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.2e-168 597.8 643 52.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 1.2e-168 597.8 644 53.4
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 2.0e-168 597.0 652 53.5
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 3.8e-167 592.8 644 53.1
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 2.5e-166 590.1 639 54.3
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 3.2e-166 589.7 674 53.9
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.2e-165 587.8 641 53.7
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.1e-163 581.3 600 54.5
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 5.7e-163 578.9 756 49.5
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.3e-162 577.8 644 52.0
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.5e-160 569.3 601 55.1
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.3e-159 567.8 639 51.0
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.9e-159 566.6 641 50.9
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 3.8e-159 566.2 639 51.3
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 3.6e-157 559.7 640 51.4
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 3.0e-156 556.6 669 49.9
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 3.0e-156 556.6 640 50.6
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.9e-155 553.9 656 50.2
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.3e-155 552.7 662 50.9
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 5.7e-155 552.4 669 49.6
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 5.7e-155 552.4 659 50.5
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 8.2e-154 548.5 692 48.7
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.1e-153 548.1 667 48.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 3.1e-153 546.6 637 50.4
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.1e-153 546.6 640 49.8
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 9.1e-153 545.0 623 52.8
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.2e-152 544.7 669 49.2
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.6e-149 534.3 692 47.7
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.6e-149 533.1 653 51.0
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.3e-147 526.6 646 48.8
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.3e-143 514.6 464 61.6
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.1e-142 511.5 524 54.4
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.4e-137 494.6 662 47.0
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.4e-137 493.8 645 45.3
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 3.8e-135 486.5 627 47.4
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 8.5e-135 485.3 646 46.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.4e-129 468.0 592 48.3
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.1e-129 466.5 424 62.0
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.4e-123 446.8 706 41.1
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 3.5e-120 436.8 660 42.3
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 5.5e-118 429.5 481 52.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.5e-115 421.4 673 41.5
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 3.7e-114 416.8 647 45.0
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 8.3e-114 415.6 526 48.3
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.7e-111 407.9 643 40.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.3e-111 407.5 656 42.5
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 6.4e-106 389.4 501 49.1
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 9.2e-105 385.6 664 39.8
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 6.0e-104 382.9 647 40.5
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 4.7e-101 373.2 498 44.8
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.4e-99 366.7 452 48.5
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.3e-94 350.5 422 50.2
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 6.4e-90 336.3 836 33.4
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 3.4e-75 287.3 211 69.7
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.7e-71 275.0 508 36.2
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.8e-61 241.1 357 46.8
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 6.9e-60 236.5 165 73.9
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 9.9e-59 232.6 746 29.1
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 7.9e-56 223.0 336 46.4
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 6.7e-55 219.9 213 58.2
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 3.1e-52 211.1 270 49.6
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 5.3e-52 210.3 807 26.0
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.4e-51 207.6 156 68.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.3e-50 205.7 144 75.0
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 7.4e-46 189.9 317 42.3
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 4.8e-45 187.2 227 46.7
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 6.5e-34 150.2 178 49.4
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.0e-27 128.6 93 69.9
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.1e-24 118.6 175 38.3
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.2e-23 114.0 94 69.1
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.0e-22 112.1 103 62.1
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.6e-22 111.7 72 75.0
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.8e-21 107.5 90 71.1
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.0e-12 77.0 109 42.2
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.0e-11 75.5 45 75.6
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 2.7e-11 75.1 47 76.6
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.1e-09 69.7 96 41.7
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 1.9e-09 68.9 88 45.5
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 4.7e-08 64.3 50 70.0
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 6.1e-08 63.9 128 37.5
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 6.8e-07 60.5 41 75.6


User provided reference genes

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