Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 6.1e-143 510.8 250 100.0
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 2.3e-110 402.5 251 82.1
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 2.6e-101 372.5 252 79.4
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 6.8e-94 347.8 250 70.8
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.2e-93 347.1 250 71.2
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 7.3e-88 327.8 254 67.3
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.2e-87 327.0 251 65.7
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 1.7e-84 316.6 256 66.8
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 7.8e-82 307.8 275 61.5
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.2e-74 283.9 212 67.5
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 1.8e-65 253.4 221 56.1
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 5.1e-65 251.9 250 55.6
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 5.6e-64 248.4 249 55.4
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 9.6e-64 247.7 248 55.6
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.6e-63 246.9 252 54.0
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.4e-62 243.8 253 51.4
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 6.9e-62 241.5 189 61.9
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.6e-61 239.6 253 50.6
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 3.4e-61 239.2 249 51.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.4e-61 239.2 263 52.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 5.8e-61 238.4 260 51.9
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.3e-60 237.3 249 50.2
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 2.9e-60 236.1 212 55.2
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 7.1e-59 231.5 267 50.2
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 2.3e-57 226.5 231 51.9
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.5e-56 223.0 248 50.4
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 3.3e-56 222.6 190 57.4
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 5.7e-56 221.9 249 48.6
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.1e-55 219.9 248 50.0
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.8e-55 219.5 247 49.0
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 2.4e-54 216.5 201 54.7
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 2.4e-54 216.5 189 54.0
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 3.1e-54 216.1 203 53.7
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 6.9e-54 214.9 222 50.9
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 5.9e-53 211.8 212 50.0
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 2.2e-52 209.9 182 56.6
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 2.2e-52 209.9 182 56.6
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 2.2e-52 209.9 198 53.0
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 2.9e-52 209.5 249 45.8
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 3.8e-52 209.1 210 51.0
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 3.8e-52 209.1 184 56.0
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 3.8e-52 209.1 184 56.0
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 5.0e-52 208.8 220 50.5
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 5.0e-52 208.8 200 53.5
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.9e-51 206.8 204 53.4
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 2.5e-51 206.5 249 46.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 9.3e-51 204.5 200 53.0
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 1.6e-50 203.8 254 47.2
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 6.1e-50 201.8 200 52.5
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 6.1e-50 201.8 185 51.4
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.3e-49 200.7 230 45.7
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 3.0e-49 199.5 208 48.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 6.7e-49 198.4 185 50.8
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 1.9e-48 196.8 205 49.3
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 2.5e-48 196.4 216 49.1
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 9.7e-48 194.5 202 49.5
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.3e-47 191.8 221 49.8
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 2.2e-44 183.3 184 50.5
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 2.5e-43 179.9 270 43.0
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.6e-42 177.2 193 46.6
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 1.4e-41 174.1 203 43.3
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 8.8e-41 171.4 204 45.1
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 3.3e-40 169.5 274 42.0
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 3.3e-40 169.5 246 39.4
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.3e-39 167.5 185 51.9
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 2.2e-39 166.8 270 37.0
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 6.3e-39 165.2 206 45.6
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.4e-38 164.1 191 51.3
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 9.1e-38 161.4 186 48.4
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 1.5e-37 160.6 189 50.8
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 2.2e-36 156.8 202 43.6
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 8.5e-36 154.8 202 44.6
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 8.5e-36 154.8 185 45.9
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 2.5e-35 153.3 124 65.3
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 2.5e-35 153.3 139 57.6
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.6e-34 150.6 118 61.9
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.1e-34 150.2 147 51.0
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 7.4e-32 141.7 113 60.2
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.3e-31 138.7 154 50.6
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.4e-30 137.5 165 47.9
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 5.3e-30 135.6 159 48.4
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 2.0e-29 133.7 113 57.5
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.2e-28 130.2 133 48.9
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 9.4e-27 124.8 126 45.2
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 1.4e-25 120.9 91 61.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.2e-23 113.6 152 42.8
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 3.1e-22 109.8 91 57.1
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 2.7e-21 106.7 96 54.2
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 3.8e-20 102.8 113 47.8
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 5.0e-20 102.4 113 47.8
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 4.0e-17 92.8 183 32.2
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 9.8e-16 88.2 82 53.7
arahy.Tifrunner.gnm1.ann1.1HI7LS Arachis hypogaea HOM05D037061 ORTHO05D009566 4.1e-14 82.8 124 44.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 1.6e-13 80.9 249 28.1
arahy.Tifrunner.gnm1.ann1.3PEX26 Arachis hypogaea HOM05D037061 ORTHO05D009566 2.1e-10 70.5 46 71.7
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 3.0e-09 66.6 59 54.2
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 5.2e-09 65.9 83 44.6
arahy.Tifrunner.gnm1.ann1.M2YCYK Arachis hypogaea HOM05D007631 ORTHO05D009566 1.4e-06 57.8 61 52.5


User provided reference genes

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