Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.5e-64 249.2 115 100.0
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.0e-31 140.2 90 71.1
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.2e-31 139.0 90 71.1
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.9e-31 138.7 90 70.0
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 2.9e-31 138.7 114 59.6
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 2.9e-31 138.7 102 63.7
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.4e-30 136.3 101 63.4
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.9e-30 136.0 92 69.6
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.9e-30 136.0 101 64.4
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.9e-30 136.0 80 72.5
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.9e-30 136.0 80 72.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.5e-30 135.6 92 68.5
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.2e-30 135.2 86 69.8
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 4.2e-30 134.8 81 74.1
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 4.2e-30 134.8 90 67.8
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.2e-30 134.8 86 69.8
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 4.2e-30 134.8 86 69.8
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 5.5e-30 134.4 92 68.5
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 5.5e-30 134.4 106 65.1
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 7.1e-30 134.0 101 63.4
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 9.3e-30 133.7 79 77.2
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.2e-29 133.3 109 62.4
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.6e-29 132.9 84 72.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.6e-29 132.9 86 68.6
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.1e-29 132.5 80 75.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 2.1e-29 132.5 83 74.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.7e-29 132.1 74 75.7
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 3.5e-29 131.7 102 61.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.5e-29 131.7 79 74.7
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 4.6e-29 131.3 122 54.1
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 4.6e-29 131.3 77 75.3
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 6.0e-29 131.0 85 70.6
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 6.0e-29 131.0 73 78.1
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 7.9e-29 130.6 83 72.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 7.9e-29 130.6 78 73.1
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 7.9e-29 130.6 110 62.7
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 7.9e-29 130.6 89 66.3
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 7.9e-29 130.6 80 76.2
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 7.9e-29 130.6 86 69.8
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 1.0e-28 130.2 77 74.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.0e-28 130.2 70 81.4
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.3e-28 129.8 110 60.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.0e-28 128.6 74 77.0
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 3.9e-28 128.3 88 67.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 8.7e-28 127.1 84 67.9
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.1e-27 126.7 110 57.3
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.1e-27 126.7 107 60.7
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 2.5e-27 125.6 104 57.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.7e-26 121.7 80 71.2
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.8e-25 119.4 89 60.7
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 6.9e-25 117.5 84 63.1
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 9.0e-25 117.1 78 66.7
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 3.8e-23 111.7 96 60.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 5.0e-23 111.3 118 51.7
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.4e-22 109.8 52 80.8
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.2e-21 106.7 87 58.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.2e-21 106.7 91 58.2
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.6e-21 106.3 119 50.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 2.1e-21 105.9 53 88.7
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 3.5e-21 105.1 119 49.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.3e-20 103.2 115 50.4
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.8e-20 102.8 109 51.4
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.1e-19 100.1 46 89.1
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.9e-19 99.4 99 50.5
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 9.7e-19 97.1 113 50.4
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.3e-18 96.7 47 89.4
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.3e-18 96.7 82 58.5
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.8e-18 95.5 63 69.8
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.8e-18 95.5 100 52.0
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.8e-17 92.8 65 67.7
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.8e-17 92.8 46 87.0
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 5.3e-17 91.3 46 84.8
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.6e-16 89.0 85 51.8
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.0e-15 87.0 103 50.5
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.7e-15 86.3 90 54.4
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.9e-15 85.5 82 54.9
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 6.5e-15 84.3 62 64.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.3e-12 75.9 44 72.7
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.0e-11 72.8 48 62.5
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.5e-11 72.4 80 46.2
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.2e-10 69.3 40 70.0
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 1.9e-06 56.2 31 77.4


User provided reference genes

Program Settings