Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 2.7e-68 261.9 135 100.0
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 1.5e-50 203.0 111 93.7
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 1.2e-49 199.9 111 91.9
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 1.2e-44 183.3 114 86.0
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 5.1e-43 177.9 114 82.5
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 6.6e-43 177.6 114 83.3
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 2.5e-42 175.6 114 82.5
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 3.3e-42 175.3 114 81.6
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 1.6e-41 172.9 114 79.8
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 4.0e-40 168.3 95 89.5
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 8.9e-40 167.2 114 78.9
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 1.2e-39 166.8 112 80.4
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 1.1e-37 160.2 115 74.8
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 1.4e-37 159.8 115 74.8
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 3.2e-37 158.7 115 73.9
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 1.6e-36 156.4 94 83.0
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 2.1e-36 156.0 95 82.1
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 2.7e-36 155.6 97 79.4
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 3.5e-36 155.2 94 81.9
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 3.5e-36 155.2 95 82.1
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 3.5e-36 155.2 95 82.1
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 3.5e-36 155.2 109 74.3
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 4.6e-36 154.8 111 73.9
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 4.6e-36 154.8 95 81.1
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 4.6e-36 154.8 95 81.1
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 6.0e-36 154.5 118 69.5
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 6.0e-36 154.5 99 78.8
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 7.8e-36 154.1 117 71.8
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 1.0e-35 153.7 103 74.8
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 1.0e-35 153.7 95 80.0
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 1.0e-35 153.7 103 76.7
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 1.0e-35 153.7 113 70.8
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 1.0e-35 153.7 94 81.9
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.3e-35 153.3 95 80.0
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 1.7e-35 152.9 118 68.6
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 1.7e-35 152.9 95 81.1
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 2.3e-35 152.5 99 78.8
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 2.3e-35 152.5 105 74.3
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 3.0e-35 152.1 94 80.9
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 3.9e-35 151.8 107 75.7
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 3.9e-35 151.8 118 69.5
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 5.1e-35 151.4 94 80.9
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 5.1e-35 151.4 94 79.8
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 5.1e-35 151.4 97 77.3
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 6.6e-35 151.0 117 70.1
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 6.6e-35 151.0 93 80.6
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 6.6e-35 151.0 95 78.9
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 8.6e-35 150.6 99 77.8
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 8.6e-35 150.6 99 77.8
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 8.6e-35 150.6 99 77.8
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 8.6e-35 150.6 109 70.6
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 1.1e-34 150.2 94 79.8
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 1.1e-34 150.2 94 78.7
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 1.1e-34 150.2 105 74.3
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 1.1e-34 150.2 97 75.3
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 1.5e-34 149.8 118 68.6
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 1.5e-34 149.8 93 79.6
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 1.5e-34 149.8 96 77.1
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 1.5e-34 149.8 97 75.3
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 1.9e-34 149.4 95 77.9
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 1.9e-34 149.4 95 77.9
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 1.9e-34 149.4 99 76.8
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 1.9e-34 149.4 99 76.8
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 1.9e-34 149.4 110 69.1
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 2.5e-34 149.1 103 73.8
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 2.5e-34 149.1 112 69.6
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 2.5e-34 149.1 103 73.8
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 3.3e-34 148.7 95 77.9
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 3.3e-34 148.7 95 77.9
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 3.3e-34 148.7 99 74.7
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 3.3e-34 148.7 118 67.8
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 4.3e-34 148.3 105 73.3
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 5.6e-34 147.9 123 66.7
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 5.6e-34 147.9 93 78.5
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 7.3e-34 147.5 95 75.8
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 7.3e-34 147.5 114 68.4
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 9.6e-34 147.1 113 69.0
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 9.6e-34 147.1 99 74.7
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 1.2e-33 146.7 91 79.1
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 1.6e-33 146.4 113 68.1
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 2.1e-33 146.0 95 75.8
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 2.1e-33 146.0 93 76.3
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 2.8e-33 145.6 118 66.9
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 2.8e-33 145.6 118 66.9
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 2.8e-33 145.6 94 76.6
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 3.6e-33 145.2 94 76.6
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 4.7e-33 144.8 93 75.3
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 4.7e-33 144.8 91 79.1
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 1.4e-32 143.3 95 73.7
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 1.4e-32 143.3 117 65.0
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 1.8e-32 142.9 94 74.5
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 4.0e-32 141.7 118 63.6
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 2.0e-31 139.4 92 76.1
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 3.4e-31 138.7 93 73.1
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 4.4e-31 138.3 95 71.6
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 9.3e-29 130.6 122 58.2
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 2.7e-28 129.0 127 59.8
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.3e-27 126.7 99 66.7
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 1.1e-26 123.6 99 63.6
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 2.5e-26 122.5 94 71.3
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 2.8e-25 119.0 113 56.6
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 1.1e-24 117.1 95 61.1
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 3.8e-22 108.6 71 73.2
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 1.1e-21 107.1 94 57.4
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.6e-17 93.2 95 56.8
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 1.5e-15 86.7 57 70.2
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 3.8e-14 82.0 98 43.9
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 9.6e-10 67.4 40 85.0


User provided reference genes

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