Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 0.0e+00 1439.9 791 100.0
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 0.0e+00 1179.1 794 82.1
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 2.3e-212 743.0 806 57.2
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 3.7e-210 735.7 824 55.5
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 8.5e-207 724.5 788 56.0
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 8.5e-207 724.5 811 54.3
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 2.0e-200 703.4 798 53.4
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 1.6e-197 693.7 841 53.6
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 6.3e-194 681.8 807 53.9
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 3.8e-191 672.5 750 53.9
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 1.1e-182 644.4 811 51.9
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 1.5e-182 644.0 822 50.9
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 3.7e-162 576.2 759 49.1
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 8.6e-159 565.1 891 44.9
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 3.9e-151 539.7 828 44.4
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 9.5e-150 535.0 795 45.4
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 2.0e-147 527.3 891 42.6
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 6.4e-146 522.3 804 45.4
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 5.4e-145 519.2 754 46.9
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 2.3e-143 513.8 682 48.5
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 5.1e-143 512.7 837 45.5
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 1.5e-142 511.1 839 44.8
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 3.5e-136 490.0 872 41.7
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 1.0e-135 488.4 770 45.2
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 2.3e-135 487.3 770 45.1
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.0e-135 486.9 802 45.5
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 1.6e-133 481.1 781 44.3
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 2.1e-133 480.7 786 44.4
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 1.4e-132 478.0 650 45.2
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 2.4e-132 477.2 816 43.6
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 9.3e-129 465.3 783 41.9
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 2.7e-128 463.8 816 42.6
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 1.5e-126 458.0 684 44.9
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 1.6e-125 454.5 821 39.5
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 8.1e-125 452.2 692 43.2
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 4.5e-123 446.4 808 42.5
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 4.5e-123 446.4 689 41.4
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 1.7e-122 444.5 808 40.7
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 2.9e-122 443.7 762 42.1
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 6.5e-122 442.6 677 40.8
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 1.9e-121 441.0 687 41.6
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 4.2e-121 439.9 833 41.9
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 1.0e-119 435.3 614 47.9
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 4.3e-118 429.9 698 40.7
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 2.8e-117 427.2 705 40.7
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.7e-117 426.8 663 40.6
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 1.1e-116 425.2 709 40.2
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 1.1e-116 425.2 797 38.5
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 3.1e-116 423.7 706 39.9
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 5.3e-116 422.9 813 40.3
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.0e-115 421.0 824 41.4
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 3.4e-115 420.2 804 41.4
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 7.6e-115 419.1 766 43.0
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 1.9e-113 414.5 761 39.9
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 4.2e-113 413.3 716 39.0
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 7.1e-113 412.5 688 40.3
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 1.3e-111 408.3 707 39.5
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 1.3e-111 408.3 825 39.6
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 1.8e-111 407.9 879 37.1
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 6.7e-111 406.0 828 36.7
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 1.1e-110 405.2 787 36.8
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 5.7e-110 402.9 839 36.8
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 7.4e-110 402.5 806 37.0
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 1.6e-109 401.4 850 36.4
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 2.4e-108 397.5 878 38.5
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 2.0e-107 394.4 740 41.6
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 1.4e-105 388.3 680 39.7
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 1.9e-105 387.9 804 36.7
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 4.2e-105 386.7 816 38.0
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.6e-104 384.8 684 40.9
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 2.1e-104 384.4 792 37.8
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 3.6e-104 383.6 816 37.9
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 2.3e-103 380.9 821 35.6
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 6.7e-103 379.4 806 37.8
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 1.3e-101 375.2 743 39.6
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 1.7e-101 374.8 679 38.4
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 6.3e-101 372.9 829 38.6
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 5.9e-99 366.3 686 36.0
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 5.0e-98 363.2 814 34.9
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 5.5e-97 359.8 674 38.3
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 1.0e-95 355.5 861 33.0
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 8.8e-95 352.4 674 37.2
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 1.1e-94 352.1 675 39.1
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 1.3e-93 348.6 658 36.5
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 3.1e-92 344.0 680 36.2
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 2.6e-91 340.9 686 38.5
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 7.7e-91 339.3 687 36.4
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 1.0e-90 339.0 414 56.8
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 5.0e-90 336.7 939 33.8
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 3.2e-89 334.0 814 36.4
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 4.2e-89 333.6 595 37.3
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 1.0e-87 328.9 682 34.2
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 6.7e-87 326.2 701 34.1
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 2.6e-86 324.3 786 34.0
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 1.7e-85 321.6 803 31.6
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 2.2e-85 321.2 632 42.4
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 7.0e-84 316.2 730 33.0
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 5.5e-81 306.6 736 32.2
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 6.1e-80 303.1 780 34.0
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 1.0e-79 302.4 831 35.3
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 1.4e-79 302.0 897 31.5
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 5.2e-79 300.1 806 35.5
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 2.7e-75 287.7 846 30.6
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 1.6e-72 278.5 717 31.7
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.4e-71 275.4 816 29.8
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 7.5e-70 269.6 693 31.0
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 7.5e-70 269.6 924 29.7
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 3.7e-69 267.3 702 32.8
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 7.0e-68 263.1 967 26.5
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 8.6e-66 256.1 676 35.2
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 8.6e-66 256.1 306 49.3
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 2.1e-64 251.5 787 33.4
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 6.1e-64 250.0 864 30.1
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 1.8e-63 248.4 280 48.6
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 2.2e-61 241.5 766 29.2
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 1.4e-60 238.8 428 42.1
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 1.2e-51 209.1 743 27.1
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.0e-51 208.4 695 27.9
CsaV3_3G019350 Cucumis sativus L. HOM05D005245 ORTHO05D006388 9.5e-49 199.5 275 43.6
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 6.2e-48 196.8 246 56.1
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.8e-47 195.3 701 26.0
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 8.6e-42 176.4 174 50.6
Atru.chr3.860 Acer truncatum HOM05D005245 ORTHO05D006388 1.8e-39 168.7 385 41.6
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 1.7e-37 162.2 367 36.2
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 3.9e-34 151.0 201 39.8
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 7.3e-25 120.2 150 44.7
SGA_v2.0_scaffold51G18646 Striga asiatica HOM05D005245 ORTHO05D006388 3.6e-24 117.9 498 26.7
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 8.1e-24 116.7 781 24.2
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 8.1e-24 116.7 154 46.8
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 3.4e-22 111.3 195 36.4
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 4.4e-22 110.9 306 30.1
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 2.2e-21 108.6 426 28.2
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 4.3e-17 94.4 253 28.9
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 1.6e-16 92.4 206 33.5
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 1.4e-15 89.4 196 30.1
unitig_62.g23335 Utricularia gibba HOM05D005245 ORTHO05D006388 8.4e-13 80.1 132 35.6
RcHm_v2.0_Chr4g0423021 Rosa chinensis HOM05D005245 ORTHO05D006388 2.7e-11 75.1 73 54.8
CAN.G97.26 Capsicum annuum HOM05D000252 ORTHO05D006388 1.9e-09 68.9 64 50.0
Sabra10G0125200 Salix brachista HOM05D000508 ORTHO05D000371 3.4e-06 58.2 51 54.9


User provided reference genes

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