Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 4.2e-308 1060.4 512 100.0
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 1.5e-284 982.2 512 92.0
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 2.7e-278 961.4 512 89.5
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 8.9e-274 946.4 510 88.4
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 1.7e-253 879.0 511 81.6
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 1.5e-252 875.9 511 80.4
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 4.0e-250 867.8 512 80.5
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.2e-249 866.3 509 80.0
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 3.4e-249 864.8 511 80.2
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 1.7e-248 862.4 509 79.8
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 2.7e-238 828.6 485 80.8
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 1.7e-232 809.3 520 75.2
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 8.4e-232 807.0 504 76.8
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 1.9e-231 805.8 504 76.4
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 6.7e-197 691.0 525 64.8
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 9.7e-196 687.2 525 63.0
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 2.0e-193 679.5 524 61.3
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 8.5e-192 674.1 524 61.3
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 9.4e-191 670.6 523 63.1
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 1.6e-190 669.8 521 62.0
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 3.6e-190 668.7 526 62.5
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 3.6e-190 668.7 482 65.4
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 8.0e-190 667.5 524 62.2
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 5.2e-189 664.8 523 61.4
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 5.7e-188 661.4 521 61.4
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 7.5e-188 661.0 526 61.4
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 3.7e-187 658.7 524 59.7
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 3.1e-186 655.6 524 59.9
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 4.1e-186 655.2 522 59.8
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 1.6e-185 653.3 523 60.8
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 7.7e-185 651.0 528 58.9
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 2.2e-184 649.4 523 59.7
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 2.2e-184 649.4 525 59.8
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 2.2e-184 649.4 521 60.3
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.8e-184 648.7 521 60.1
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 3.8e-184 648.7 525 60.0
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 3.2e-183 645.6 525 59.8
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 9.4e-183 644.0 522 60.0
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 4.7e-182 641.7 527 59.2
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 1.0e-181 640.6 525 58.1
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.0e-181 640.6 526 58.7
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 2.3e-181 639.4 526 59.1
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.0e-181 639.0 521 59.3
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 3.0e-181 639.0 482 61.6
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 6.8e-181 637.9 523 57.4
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 1.2e-180 637.1 524 59.4
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 2.0e-180 636.3 525 57.3
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 3.4e-180 635.6 524 57.6
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 5.7e-180 634.8 530 56.4
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 5.7e-180 634.8 524 58.2
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 9.8e-180 634.0 521 59.1
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 9.8e-180 634.0 612 53.9
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 1.7e-179 633.3 523 57.7
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 2.2e-179 632.9 526 58.4
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 8.3e-179 630.9 527 57.9
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 1.1e-178 630.6 523 58.7
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 1.1e-178 630.6 531 58.4
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 1.4e-178 630.2 524 57.8
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 9.2e-178 627.5 489 60.5
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 2.0e-177 626.3 524 57.4
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 7.7e-177 624.4 523 57.0
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 1.0e-176 624.0 523 56.8
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 1.3e-176 623.6 526 57.0
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 1.3e-176 623.6 522 56.3
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 1.7e-176 623.2 524 55.9
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 2.9e-176 622.5 528 56.6
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 3.8e-176 622.1 548 55.8
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 3.8e-176 622.1 531 58.6
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 1.1e-175 620.5 480 61.0
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 1.5e-175 620.2 522 56.9
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 9.5e-175 617.5 530 55.8
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 2.1e-174 616.3 524 57.8
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 2.8e-174 615.9 524 56.5
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 8.0e-174 614.4 523 57.0
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 1.8e-173 613.2 519 57.6
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.0e-173 612.5 481 60.3
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 5.7e-172 608.2 550 54.2
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 7.5e-172 607.8 555 53.9
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 1.7e-171 606.7 559 53.1
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 6.4e-171 604.7 556 53.4
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 1.1e-170 604.0 472 60.6
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 5.4e-170 601.7 505 55.8
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 4.6e-169 598.6 447 63.8
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 1.7e-168 596.7 482 60.6
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 3.0e-168 595.9 518 55.4
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 8.6e-168 594.3 524 55.2
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.7e-163 580.1 472 57.6
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.7e-163 580.1 521 55.5
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 2.9e-163 579.3 433 63.7
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 7.0e-162 574.7 523 54.3
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 1.0e-160 570.9 530 54.2
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.3e-160 569.7 523 53.5
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 2.3e-160 569.7 565 53.5
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 3.3e-159 565.8 523 56.0
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 4.3e-159 565.5 523 52.8
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 1.1e-157 560.8 523 55.3
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 3.5e-153 545.8 462 57.4
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 2.8e-150 536.2 418 58.6
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 6.8e-149 531.6 413 59.6
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 1.1e-146 524.2 698 43.6
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 4.7e-142 508.8 400 60.8
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 8.4e-139 498.0 417 59.2
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 1.0e-136 491.1 421 57.0
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 1.5e-132 477.2 528 48.1
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 9.9e-132 474.6 584 46.6
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 4.6e-129 465.7 483 50.5
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 4.8e-126 455.7 410 55.6
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 1.5e-124 450.7 352 61.4
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 5.5e-122 442.2 523 44.0
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 3.9e-120 436.0 384 55.5
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 1.6e-118 430.6 235 86.8
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 2.0e-108 397.1 525 43.4
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 5.9e-108 395.6 310 60.3
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 1.6e-105 387.5 345 56.8
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 2.1e-97 360.5 197 87.3
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 3.0e-96 356.7 300 57.7
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 5.1e-96 355.9 254 67.7
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 5.3e-93 345.9 263 58.9
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 1.2e-89 334.7 252 61.5
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 7.0e-85 318.9 253 60.5
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 5.0e-83 312.8 255 58.8
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 3.2e-82 310.1 255 58.4
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 5.7e-79 299.3 297 50.8
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 9.7e-79 298.5 223 65.0
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 1.3e-78 298.1 213 64.8
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 2.2e-78 297.4 255 58.0
Zm00001eb294000 Zea mays HOM05D000219 ORTHO05D004649 6.3e-78 295.8 356 44.1
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 1.4e-77 294.7 250 56.8
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 5.3e-77 292.7 261 55.6
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 1.0e-75 288.5 250 56.0
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.6e-73 281.2 237 56.5
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 1.6e-73 281.2 253 55.3
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 2.7e-73 280.4 294 49.7
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 1.1e-69 268.5 226 58.4
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 5.7e-63 246.1 251 49.8
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 2.4e-61 240.7 172 69.2
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 8.6e-59 232.3 253 48.2
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 1.4e-56 224.9 143 71.3
SMO146G0027 Selaginella moellendorffii HOM05D000219 ORTHO05D004649 3.0e-56 223.8 253 47.0
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 8.9e-56 222.2 253 48.6
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 2.0e-55 221.1 167 58.1
Cfa023086 Carpinus fangiana HOM05D000219 ORTHO05D004649 5.9e-52 209.5 226 48.2
HPP92_021534 Vanilla planifolia HOM05D000219 ORTHO05D004649 1.3e-51 208.4 176 56.8
HanXRQChr10g0318971 Helianthus annuus HOM05D000219 ORTHO05D004649 9.8e-47 192.2 164 58.5
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 2.0e-44 184.5 232 44.8
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.0e-43 180.6 162 53.1
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 4.3e-42 176.8 184 50.5
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.9e-38 164.1 280 39.3
Haze_26924 Corylus avellana HOM05D000219 ORTHO05D004649 1.2e-36 158.7 170 46.5
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 5.1e-35 153.3 111 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 4.7e-33 146.7 125 56.0
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 5.2e-32 143.3 100 64.0
Cpa.g.c44268 Carica papaya HOM05D000219 ORTHO05D004649 1.6e-28 131.7 70 80.0
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 5.1e-27 126.7 122 50.0
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 9.6e-26 122.5 170 42.9
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 4.7e-25 120.2 110 55.5
CAN.G555.5 Capsicum annuum HOM05D000219 ORTHO05D000137 3.1e-24 117.5 132 46.2
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 4.0e-24 117.1 102 53.9
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 2.9e-22 110.9 88 61.4
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 1.2e-20 105.5 88 62.5
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 4.6e-20 103.6 220 33.2
Nitab4.5_0005102g0050 Nicotiana tabacum HOM05D000219 ORTHO05D004649 5.1e-19 100.1 79 60.8
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 8.7e-19 99.4 59 74.6
PGSC0003DMG400016550 Solanum tuberosum HOM05D000219 ORTHO05D004649 3.3e-18 97.4 87 56.3
CARHR125240 Cardamine hirsuta HOM05D000219 ORTHO05D004649 1.7e-14 85.1 107 44.9
PGSC0003DMG400020961 Solanum tuberosum HOM05D000219 ORTHO05D004649 6.4e-14 83.2 46 78.3
Actinidia05378 Actinidia chinensis HOM05D000219 ORTHO05D004649 3.5e-12 77.4 46 71.7
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 1.3e-11 75.5 55 60.0
HanXRQChr10g0318991 Helianthus annuus HOM05D000219 ORTHO05D021059 3.9e-11 73.9 65 46.2
AL4G27720 Arabidopsis lyrata HOM05D000219 ORTHO05D021059 1.3e-09 68.9 94 44.7
Atru.chr10.1695 Acer truncatum HOM05D000219 ORTHO05D021059 4.8e-09 67.0 81 42.0
A07p24800 Brassica napus HOM05D000219 ORTHO05D017689 8.1e-09 66.2 69 43.5
BraA03t15335Z Brassica rapa HOM05D000219 ORTHO05D017689 8.1e-09 66.2 69 43.5
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 1.1e-08 65.9 69 43.5
SHI31712 Sapria himalayana HOM05D000219 ORTHO05D366583 2.4e-08 64.7 49 59.2
PGSC0003DMG401004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 6.9e-08 63.2 53 56.6
C09p23930 Brassica napus HOM05D000219 ORTHO05D017689 9.0e-08 62.8 69 42.0
BcaC05g27999 Brassica carinata HOM05D012973 ORTHO05D016770 7.6e-07 59.7 47 61.7
C05p40080 Brassica napus HOM05D012973 ORTHO05D016770 7.6e-07 59.7 47 61.7
BolC5t32753H Brassica oleracea HOM05D012973 ORTHO05D016770 7.6e-07 59.7 47 61.7
Gohir.A03G040550 Gossypium hirsutum HOM05D000219 ORTHO05D021059 7.6e-07 59.7 68 50.0
C09p21500 Brassica napus HOM05D000352 ORTHO05D000260 1.7e-06 58.5 48 62.5
C03p38700 Brassica napus HOM05D012973 ORTHO05D016770 3.8e-06 57.4 43 62.8
BolC3t16144H Brassica oleracea HOM05D012973 ORTHO05D016770 8.4e-06 56.2 41 63.4


User provided reference genes

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