Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 1.0e-204 716.5 354 100.0
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 1.2e-91 340.9 248 73.4
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 3.0e-79 299.7 251 68.9
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 7.7e-75 285.0 245 66.5
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 1.6e-67 260.8 252 61.5
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 2.7e-67 260.0 272 59.2
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 8.8e-63 245.0 269 53.5
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 2.8e-61 240.0 273 54.2
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 2.8e-61 240.0 251 58.2
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 8.3e-61 238.4 258 58.1
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 1.8e-60 237.3 258 55.8
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 3.1e-60 236.5 263 53.2
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 3.1e-60 236.5 263 54.8
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 9.1e-60 235.0 273 53.5
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 9.1e-60 235.0 248 54.4
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-59 233.8 262 57.6
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 2.7e-59 233.4 262 56.9
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 3.5e-59 233.0 264 56.8
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 4.5e-59 232.6 259 57.1
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 5.9e-59 232.3 264 56.8
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.0e-58 231.5 247 57.9
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.3e-58 231.1 226 57.5
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 2.3e-58 230.3 275 52.0
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 8.6e-58 228.4 271 51.3
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 8.6e-58 228.4 206 62.1
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.5e-57 227.6 246 54.1
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 3.3e-57 226.5 269 50.6
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 5.5e-57 225.7 272 51.5
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 7.2e-57 225.3 264 56.1
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 7.2e-57 225.3 268 51.9
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 7.2e-57 225.3 260 52.7
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.6e-56 224.2 248 53.2
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 2.1e-56 223.8 282 50.4
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 4.7e-56 222.6 265 52.8
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 4.7e-56 222.6 232 56.9
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 8.0e-56 221.9 258 50.8
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 1.0e-55 221.5 249 54.2
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 2.3e-55 220.3 268 50.7
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 5.2e-55 219.2 260 54.2
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 6.8e-55 218.8 247 53.4
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 1.5e-54 217.6 206 60.2
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 1.5e-54 217.6 204 58.3
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.5e-54 217.6 209 57.4
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.6e-54 216.9 256 53.1
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 3.4e-54 216.5 279 47.0
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 5.7e-54 215.7 244 54.9
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 9.8e-54 214.9 249 50.6
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 1.7e-53 214.2 236 53.8
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.7e-53 214.2 206 58.7
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 4.9e-53 212.6 237 54.4
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 8.3e-53 211.8 215 57.2
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 1.1e-52 211.5 286 49.0
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 1.4e-52 211.1 259 49.8
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 2.4e-52 210.3 204 55.4
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 2.4e-52 210.3 209 57.9
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 3.1e-52 209.9 204 55.4
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 4.1e-52 209.5 242 51.2
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 5.4e-52 209.1 209 57.4
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 9.2e-52 208.4 228 53.9
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 9.2e-52 208.4 236 53.0
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 1.2e-51 208.0 247 51.0
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 2.0e-51 207.2 238 53.4
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 5.9e-51 205.7 250 51.6
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 5.9e-51 205.7 257 49.4
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 7.8e-51 205.3 242 50.4
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 1.0e-50 204.9 246 51.2
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.0e-50 204.9 258 51.9
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 1.0e-50 204.9 254 49.6
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 1.7e-50 204.1 244 50.8
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 2.3e-50 203.8 249 51.4
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 2.3e-50 203.8 249 51.4
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 3.8e-50 203.0 245 49.8
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 8.6e-50 201.8 245 49.8
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 5.6e-49 199.1 269 48.0
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 5.6e-49 199.1 233 51.5
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 7.3e-49 198.7 314 43.3
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 1.2e-48 198.0 247 48.6
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 2.8e-48 196.8 216 53.7
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 6.1e-48 195.7 213 51.6
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 8.0e-48 195.3 183 61.2
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 8.9e-47 191.8 219 53.4
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 8.9e-47 191.8 250 48.8
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.5e-46 191.0 247 48.2
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 3.7e-45 186.4 256 47.7
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 1.1e-44 184.9 233 49.4
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 1.1e-44 184.9 170 60.6
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 2.0e-43 180.6 190 56.3
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 3.9e-42 176.4 330 40.3
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 7.3e-41 172.2 244 46.3
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 3.6e-40 169.9 218 47.7
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 6.2e-40 169.1 165 57.0
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 3.1e-39 166.8 263 44.9
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 3.1e-39 166.8 206 47.6
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 9.8e-38 161.8 233 44.6
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 2.4e-36 157.1 205 52.2
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 3.2e-36 156.8 215 43.3
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 7.8e-35 152.1 107 72.0
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 7.8e-35 152.1 188 47.3
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 6.6e-34 149.1 169 52.1
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.9e-33 147.5 176 49.4
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 3.3e-33 146.7 192 54.2
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 1.8e-31 141.0 193 49.2
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 6.8e-31 139.0 89 75.3
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 5.4e-28 129.4 73 83.6
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 1.6e-27 127.9 194 43.3
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 2.1e-24 117.5 190 39.5
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 5.8e-22 109.4 85 69.4
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.3e-21 108.2 116 55.2
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 4.9e-21 106.3 154 44.2
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 2.4e-20 104.0 204 38.7
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 1.6e-19 101.3 171 36.8
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 1.1e-17 95.1 52 84.6
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 9.6e-17 92.0 108 50.0
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 2.8e-16 90.5 173 34.7
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 4.7e-16 89.7 96 39.6
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 1.6e-11 74.7 174 37.4
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 1.6e-11 74.7 79 53.2
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 4.6e-11 73.2 49 69.4


User provided reference genes

Program Settings