Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 4.5e-266 920.6 439 100.0
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 4.5e-250 867.5 439 93.8
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.4e-235 819.3 440 88.2
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 4.1e-219 764.6 444 83.3
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.3e-217 759.6 438 83.6
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 1.0e-214 750.0 430 82.8
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 4.4e-213 744.6 435 83.0
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 8.3e-212 740.3 430 83.3
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.3e-209 733.0 439 80.6
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 7.0e-203 710.7 427 79.9
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 4.3e-200 701.4 438 78.1
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.6e-194 682.9 426 76.8
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 3.0e-193 678.7 427 75.9
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 4.3e-192 674.9 434 73.5
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.4e-190 669.8 432 72.5
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.8e-190 669.5 418 74.6
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 1.8e-190 669.5 433 73.7
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.0e-190 668.3 428 74.3
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 4.0e-190 668.3 418 74.4
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.4e-189 665.2 418 74.2
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 1.3e-188 663.3 434 72.4
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 6.4e-188 661.0 427 73.1
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.2e-187 658.7 425 73.2
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.2e-187 658.7 423 72.8
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 7.1e-187 657.5 433 72.1
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 7.1e-187 657.5 431 72.4
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.1e-186 656.0 426 71.4
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 2.1e-186 656.0 426 71.4
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.1e-186 656.0 433 71.6
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.7e-186 655.6 423 72.6
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 6.0e-186 654.4 430 71.4
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 1.0e-185 653.7 432 71.1
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 3.0e-185 652.1 424 73.3
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 6.6e-185 651.0 426 72.3
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 6.6e-185 651.0 424 73.3
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 8.7e-185 650.6 419 73.7
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.1e-184 650.2 417 73.1
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.5e-184 649.8 424 71.9
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 5.6e-184 647.9 426 70.9
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 9.6e-184 647.1 423 72.1
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.2e-183 646.7 426 70.4
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 2.8e-183 645.6 428 70.8
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 4.7e-183 644.8 424 72.2
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.2e-183 644.4 432 70.6
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.1e-182 643.7 424 70.5
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 2.4e-182 642.5 431 69.6
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 6.9e-182 641.0 425 70.8
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 9.0e-182 640.6 436 68.8
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 1.5e-181 639.8 432 70.1
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 2.0e-181 639.4 423 70.9
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.4e-181 638.6 423 71.2
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.4e-181 638.6 432 69.9
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 5.8e-181 637.9 423 70.7
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 5.8e-181 637.9 421 68.9
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 7.6e-181 637.5 434 69.1
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 4.2e-179 631.7 428 70.6
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 7.1e-179 630.9 420 70.0
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 7.1e-179 630.9 427 69.1
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 4.6e-178 628.2 424 70.8
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 6.0e-178 627.9 427 69.1
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 7.8e-178 627.5 425 69.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 7.8e-178 627.5 426 68.8
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.0e-177 627.1 414 69.8
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.9e-177 625.2 428 70.1
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.9e-177 625.2 426 66.7
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 5.1e-177 624.8 426 69.2
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 6.6e-177 624.4 355 77.5
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 6.6e-177 624.4 427 68.6
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-176 623.6 420 69.0
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.1e-176 623.6 430 68.4
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.9e-176 622.9 431 68.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 5.6e-176 621.3 427 69.6
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 4.8e-175 618.2 428 66.6
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.8e-174 616.3 428 68.7
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 7.6e-173 610.9 419 68.0
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 7.6e-173 610.9 423 69.3
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 1.7e-172 609.8 431 67.7
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.2e-172 609.4 346 78.9
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 8.4e-172 607.4 426 69.7
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.4e-172 607.4 428 68.2
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.1e-171 607.1 431 68.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 1.4e-171 606.7 430 67.7
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 2.4e-171 605.9 420 67.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 5.4e-171 604.7 430 67.9
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 7.1e-171 604.4 428 67.5
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.2e-170 603.6 415 66.7
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 1.6e-170 603.2 398 70.1
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 1.6e-170 603.2 417 68.8
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 4.6e-170 601.7 417 68.6
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 1.3e-169 600.1 420 66.9
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.3e-169 600.1 418 67.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 3.0e-169 599.0 415 67.5
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 3.0e-169 599.0 356 75.3
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.5e-168 596.7 436 64.7
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 4.3e-168 595.1 357 73.9
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 7.4e-168 594.3 336 77.7
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 2.1e-167 592.8 418 66.5
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 2.1e-167 592.8 418 66.5
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.3e-166 588.2 418 67.0
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 2.9e-164 582.4 385 67.5
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 4.9e-164 581.6 288 90.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.1e-163 580.5 429 65.3
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 3.2e-163 578.9 334 76.0
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 4.2e-163 578.6 413 68.0
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 5.1e-161 571.6 437 63.2
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 8.7e-161 570.9 355 71.0
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 7.4e-160 567.8 355 71.0
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.3e-159 567.0 414 65.9
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 1.8e-158 563.1 415 64.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 3.4e-157 558.9 364 68.4
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 8.4e-156 554.3 383 64.8
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.2e-151 539.7 433 61.7
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.8e-150 536.6 427 60.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 2.6e-149 532.7 283 82.0
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.5e-144 516.9 364 63.7
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.8e-140 502.3 362 62.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.1e-131 474.2 357 59.7
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 4.7e-130 468.8 357 61.1
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.4e-120 436.0 322 64.6
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 2.3e-100 370.2 211 77.3
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.5e-99 367.5 215 73.5
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.9e-99 367.1 356 51.7
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.0e-97 361.3 209 76.1
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 3.0e-92 343.2 277 57.0
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 3.2e-62 243.4 258 53.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 5.4e-54 216.1 400 39.0
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.5e-27 127.5 95 57.9
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 8.2e-26 122.5 90 62.2
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.4e-25 121.7 58 87.9
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 2.0e-16 91.3 113 43.4
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 3.2e-06 57.4 77 42.9


User provided reference genes

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