Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 0.0e+00 1262.3 659 100.0
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 4.8e-296 1020.8 655 82.0
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 2.0e-270 935.6 659 75.7
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 2.6e-193 679.5 655 59.4
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.2e-175 619.0 654 55.4
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.1e-174 616.7 664 54.8
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 8.5e-168 594.7 664 53.5
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.0e-165 587.8 657 54.2
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.4e-162 576.6 657 53.3
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.0e-157 561.2 651 51.8
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.7e-107 393.3 697 39.0
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 3.7e-107 393.3 719 39.1
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.9e-106 391.0 706 39.2
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 3.2e-106 390.2 676 40.7
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 5.4e-106 389.4 699 38.9
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.3e-104 384.0 705 38.9
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 7.3e-103 379.0 737 38.5
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 3.7e-99 366.7 684 38.7
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 8.3e-99 365.5 717 37.9
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 2.4e-98 364.0 733 38.9
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 7.1e-98 362.5 719 37.4
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 4.3e-95 353.2 761 37.7
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 2.8e-94 350.5 720 39.0
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 2.8e-94 350.5 725 36.6
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 3.6e-94 350.1 713 38.8
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 6.2e-94 349.4 664 39.5
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 8.1e-94 349.0 702 37.9
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 1.4e-93 348.2 521 43.4
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.4e-93 348.2 721 38.0
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 4.0e-93 346.7 721 38.0
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 1.3e-91 341.7 701 36.8
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.7e-91 341.3 742 36.0
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 3.8e-91 340.1 664 40.2
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 5.4e-90 336.3 699 36.6
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 6.0e-89 332.8 726 36.1
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 8.7e-88 328.9 723 36.0
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.3e-87 326.6 533 40.5
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 2.8e-86 323.9 799 35.5
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 1.8e-85 321.2 687 36.5
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 6.9e-85 319.3 658 37.7
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.5e-84 318.2 330 52.7
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 4.4e-84 316.6 677 37.2
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 1.3e-83 315.1 714 36.3
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 4.9e-83 313.2 721 35.9
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 8.4e-83 312.4 612 38.6
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 5.4e-82 309.7 632 37.0
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 9.3e-82 308.9 614 37.5
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 9.3e-82 308.9 669 36.8
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 3.0e-80 303.9 519 42.0
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 8.7e-80 302.4 690 35.4
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 1.1e-79 302.0 632 36.9
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.5e-79 301.6 473 43.8
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 1.5e-79 301.6 610 37.5
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 3.3e-79 300.4 372 53.5
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 3.6e-78 297.0 709 33.6
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 4.8e-78 296.6 687 36.0
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 6.2e-78 296.2 683 36.3
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.1e-77 295.4 482 41.3
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 1.1e-77 295.4 671 35.2
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 2.4e-77 294.3 677 37.7
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 2.4e-77 294.3 685 35.8
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 9.0e-77 292.4 683 35.0
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 2.6e-76 290.8 636 37.3
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 2.6e-76 290.8 614 35.5
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 3.4e-76 290.4 659 34.0
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 3.4e-76 290.4 480 40.6
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 4.5e-76 290.0 570 37.4
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 4.9e-75 286.6 695 35.1
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 4.9e-75 286.6 654 34.7
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 2.4e-74 284.3 649 35.1
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.2e-73 282.0 687 34.5
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 1.6e-73 281.6 681 33.5
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 2.1e-73 281.2 553 38.0
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 3.5e-73 280.4 661 34.3
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 7.9e-73 279.3 621 34.9
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.0e-72 278.9 564 35.5
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.1e-71 275.4 762 31.9
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.9e-71 274.6 717 34.2
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.3e-70 271.9 677 33.8
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 4.8e-70 270.0 369 46.1
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 5.3e-69 266.5 477 37.9
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 1.5e-68 265.0 761 32.9
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.3e-67 261.9 719 32.1
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.1e-62 244.6 379 40.6
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 6.2e-62 243.0 419 39.4
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.2e-62 242.7 510 37.3
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.1e-61 240.4 523 35.6
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.7e-59 235.0 729 32.6
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 3.3e-55 220.7 423 37.1
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 2.2e-54 218.0 575 32.2
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 4.1e-53 213.8 385 40.5
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 2.0e-47 194.9 364 36.8
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 1.7e-43 181.8 514 29.0
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 1.7e-43 181.8 546 29.1
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 6.5e-43 179.9 431 36.7
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.2e-41 175.6 341 34.3
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 1.2e-41 175.6 562 29.7
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.0e-40 172.6 532 29.7
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 9.7e-39 166.0 287 39.0
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 1.8e-37 161.8 393 33.8
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 4.1e-37 160.6 273 41.4
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 4.1e-37 160.6 407 31.0
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 9.1e-37 159.5 356 36.5
TPR.G14651 Trifolium pratense HOM05D006063 ORTHO05D000023 3.8e-35 154.1 238 45.8
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 2.3e-32 144.8 182 48.9
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 5.9e-28 130.2 416 30.8
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 2.9e-27 127.9 372 35.2
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.6e-25 122.1 246 36.6
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 4.7e-25 120.6 368 31.0
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 9.8e-23 112.8 113 56.6
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 4.1e-21 107.5 167 42.5
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.6e-20 105.5 238 34.9
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 7.2e-18 96.7 194 38.7
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 1.4e-16 92.4 79 63.3
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.0e-11 76.3 143 33.6
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 1.2e-09 69.3 121 38.8
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 1.4e-08 65.9 144 31.9
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 5.2e-08 63.9 48 68.8
CBR_g8884 Chara braunii HOM05D006063 ORTHO05D000023 9.8e-07 59.7 62 51.6


User provided reference genes

Program Settings