Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G0908 Vigna mungo HOM05D003183 ORTHO05D003697 7.5e-101 370.5 190 100.0
Phvul.009G158300 Phaseolus vulgaris HOM05D003183 ORTHO05D003697 3.2e-51 205.7 116 90.5
Glyma.06G160600 Glycine max HOM05D003183 ORTHO05D003697 1.0e-49 200.7 114 89.5
Lj1g0020643 Lotus japonicus HOM05D003183 ORTHO05D003697 5.8e-45 184.9 116 82.8
Lalb_Chr23g0272761 Lupinus albus HOM05D003183 ORTHO05D003697 6.4e-44 181.4 116 81.0
arahy.Tifrunner.gnm1.ann1.P9FT6E Arachis hypogaea HOM05D003183 ORTHO05D003697 1.9e-43 179.9 132 71.2
VMungo1309G2590 Vigna mungo HOM05D003183 ORTHO05D003697 4.2e-43 178.7 93 95.7
TPR.G22573 Trifolium pratense HOM05D003183 ORTHO05D003697 1.2e-42 177.2 113 80.5
Psat5g048040 Pisum sativum HOM05D003183 ORTHO05D003697 2.5e-40 169.5 116 75.9
Glyma.04G205000 Glycine max HOM05D003183 ORTHO05D003697 2.1e-39 166.4 91 90.1
CiPaw.16G118700 Carya illinoinensis HOM05D003183 ORTHO05D003697 4.8e-31 138.7 119 63.0
Medtr3g097460 Medicago truncatula HOM05D003183 ORTHO05D003697 6.3e-31 138.3 92 75.0
COL.COLO4_26600 Corchorus olitorius HOM05D003183 ORTHO05D003697 2.2e-28 129.8 114 64.0
RcHm_v2.0_Chr5g0021231 Rosa chinensis HOM05D003183 ORTHO05D003697 3.2e-27 125.9 116 59.5
TAR376G0916 Trochodendron aralioides HOM05D003183 ORTHO05D003697 5.5e-27 125.2 114 59.6
FvH4_3g13040 Fragaria vesca HOM05D003183 ORTHO05D003697 1.2e-26 124.0 116 58.6
FAN11G0229 Fragaria x ananassa HOM05D003183 ORTHO05D003697 1.2e-26 124.0 116 58.6
FAN16G0308 Fragaria x ananassa HOM05D003183 ORTHO05D003697 3.5e-26 122.5 116 58.6
FAN25G0263 Fragaria x ananassa HOM05D003183 ORTHO05D003697 3.5e-26 122.5 116 58.6
Dinv02476 Davidia involucrata HOM05D003183 ORTHO05D003697 6.1e-26 121.7 114 58.8
ATR0584G254 Amborella trichopoda HOM05D003183 ORTHO05D003697 3.9e-25 119.0 107 56.1
Gohir.A12G088300 Gossypium hirsutum HOM05D003183 ORTHO05D003697 5.1e-25 118.6 115 57.4
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 1.5e-24 117.1 139 49.6
Sabra04G0089400 Salix brachista HOM05D003183 ORTHO05D003697 3.3e-24 115.9 140 50.0
Eucgr.H05053 Eucalyptus grandis HOM05D003183 ORTHO05D003697 9.7e-24 114.4 117 56.4
Potri.004G137600 Populus trichocarpa HOM05D003183 ORTHO05D003697 2.8e-23 112.8 138 50.0
Thecc.01G236000 Theobroma cacao HOM05D003183 ORTHO05D003697 4.8e-23 112.1 139 52.5
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 6.3e-23 111.7 117 53.8
Haze_19341 Corylus avellana HOM05D003183 ORTHO05D003697 1.8e-22 110.2 89 62.9
Nn5g27618 Nelumbo nucifera HOM05D003183 ORTHO05D003697 1.8e-22 110.2 114 51.8
CANSAT54G0202 Cannabis sativa HOM05D003183 ORTHO05D003697 3.1e-22 109.4 93 63.4
Sed0010306 Sechium edule HOM05D003183 ORTHO05D003697 9.0e-22 107.8 115 52.2
PSO017G4029 Papaver somniferum HOM05D003183 ORTHO05D003697 1.2e-21 107.5 114 50.9
PSO063G4772 Papaver somniferum HOM05D003183 ORTHO05D003697 1.2e-21 107.5 114 50.9
Duzib147G1703 Durio zibethinus HOM05D003183 ORTHO05D003697 5.9e-21 105.1 139 50.4
MD10G1226800 Malus domestica HOM05D003183 ORTHO05D003697 5.9e-21 105.1 116 56.9
MBI17_g09750_MAGBIO Magnolia biondii HOM05D003183 ORTHO05D003697 7.7e-21 104.8 115 51.3
Prupe.4G118400 Prunus persica HOM05D003183 ORTHO05D003697 1.0e-20 104.4 138 49.3
QL10p038579 Quercus lobata HOM05D003183 ORTHO05D003697 2.9e-20 102.8 93 59.1
MSTRG.15266 Avicennia marina HOM05D003183 ORTHO05D003697 3.8e-20 102.4 114 51.8
CDE08G0709 Ceratophyllum demersum HOM05D003183 ORTHO05D003697 5.0e-20 102.1 114 50.0
TWI31G0435 Tripterygium wilfordii HOM05D003183 ORTHO05D003697 5.0e-20 102.1 89 60.7
ClCG04G002390 Citrullus lanatus HOM05D003183 ORTHO05D003697 6.5e-20 101.7 115 47.8
Cc07_g20910 Coffea canephora HOM05D003183 ORTHO05D003697 8.5e-20 101.3 110 50.9
PGR102G1799 Punica granatum HOM05D003183 ORTHO05D003697 3.2e-19 99.4 107 55.1
AUR62036042 Chenopodium quinoa HOM05D003183 ORTHO05D003697 5.5e-19 98.6 118 49.2
CsaV3_4G030400 Cucumis sativus L. HOM05D003183 ORTHO05D003697 7.2e-19 98.2 115 46.1
MD05G1245500 Malus domestica HOM05D003183 ORTHO05D003697 1.2e-18 97.4 116 52.6
EL10Ac4g08985 Beta vulgaris HOM05D003183 ORTHO05D003697 2.1e-18 96.7 118 47.5
Gorai.008G096800 Gossypium raimondii HOM05D003183 ORTHO05D003697 1.0e-17 94.4 90 55.6
AUR62004821 Chenopodium quinoa HOM05D003183 ORTHO05D003697 3.0e-17 92.8 107 50.5
Actinidia36590 Actinidia chinensis HOM05D003183 ORTHO05D003697 3.9e-17 92.4 135 45.9
Ah.04g163190 Amaranthus hybridus HOM05D003183 ORTHO05D003697 3.9e-17 92.4 160 40.0
Migut.L00378 Erythranthe guttata HOM05D003183 ORTHO05D003697 3.9e-17 92.4 114 49.1
Actinidia19956 Actinidia chinensis HOM05D003183 ORTHO05D003697 5.1e-17 92.0 113 47.8
Migut.L00369 Erythranthe guttata HOM05D003183 ORTHO05D003697 3.3e-16 89.4 114 49.1
ECA248G2737 Erigeron canadensis HOM05D003183 ORTHO05D003697 4.3e-16 89.0 103 48.5
Lsat_1_v5_gn_1_78460 Lactuca sativa HOM05D003183 ORTHO05D003697 5.7e-16 88.6 105 47.6
Hund06902 Selenicereus undatus HOM05D003183 ORTHO05D003697 9.7e-16 87.8 160 37.5
unitig_37.g12360 Utricularia gibba HOM05D003183 ORTHO05D003697 4.8e-15 85.5 108 42.6
HanXRQChr01g0017781 Helianthus annuus HOM05D003183 ORTHO05D003697 9.1e-14 81.3 103 49.5
Sc09g0004280 Simmondsia chinensis HOM05D003183 ORTHO05D003697 1.5e-13 80.5 157 35.7
DCAR_017150 Daucus carota HOM05D003183 ORTHO05D003697 2.0e-13 80.1 89 44.9
Oeu011005.1 Olea europaea HOM05D003183 ORTHO05D003697 4.5e-13 79.0 92 50.0
Oeu011006.1 Olea europaea HOM05D003183 ORTHO05D003697 4.5e-13 79.0 92 50.0
Nn1g06153 Nelumbo nucifera HOM05D003183 ORTHO05D003697 5.9e-13 78.6 89 47.2
CSS0007160 Camellia sinensis var. sinensis HOM05D003183 ORTHO05D003697 7.9e-10 68.2 117 41.9
SEGI_23078 Sequoiadendron giganteum HOM05D003183 ORTHO05D003697 8.8e-09 64.7 81 44.4
ATR1096G110 Amborella trichopoda HOM05D003183 ORTHO05D003697 1.5e-08 63.9 65 47.7
Pp3c3_22550 Physcomitrium patens HOM05D003183 ORTHO05D003697 7.4e-08 61.6 70 45.7
Dinv11643 Davidia involucrata HOM05D003183 ORTHO05D003697 2.2e-07 60.1 63 50.8
Ca_17034_v3 Cicer arietinum L. HOM05D003183 ORTHO05D003697 6.3e-07 58.5 42 64.3
Migut.K00179 Erythranthe guttata HOM05D003183 ORTHO05D003697 1.1e-06 57.8 63 52.4
Hma1.2p1_1166F.1_g262990 Hydrangea macrophylla HOM05D003183 ORTHO05D003697 1.1e-06 57.8 63 47.6
AUR62029969 Chenopodium quinoa HOM05D003183 ORTHO05D003697 1.8e-06 57.0 94 43.6
Thecc.05G130300 Theobroma cacao HOM05D003183 ORTHO05D003697 2.4e-06 56.6 63 44.4
Hma1.2p1_0917F.1_g236550 Hydrangea macrophylla HOM05D003183 ORTHO05D003697 3.1e-06 56.2 63 47.6
VMungo1127G1529 Vigna mungo HOM05D003396 ORTHO05D003646 3.1e-06 56.2 36 75.0
Ah.07g203640 Amaranthus hybridus HOM05D003183 ORTHO05D003697 5.3e-06 55.5 94 40.4
COL.COLO4_10583 Corchorus olitorius HOM05D003183 ORTHO05D003697 5.3e-06 55.5 103 37.9
Ca_19001_v3 Cicer arietinum L. HOM05D003396 ORTHO05D003646 7.0e-06 55.1 26 96.2
Medtr4g075340 Medicago truncatula HOM05D003396 ORTHO05D003646 7.0e-06 55.1 26 96.2
Phvul.011G026600 Phaseolus vulgaris HOM05D003396 ORTHO05D003646 7.0e-06 55.1 26 96.2
SMO361G0166 Selaginella moellendorffii HOM05D003183 ORTHO05D003697 7.0e-06 55.1 85 36.5
SMO361G0714 Selaginella moellendorffii HOM05D003183 ORTHO05D003697 7.0e-06 55.1 85 36.5
TPR.G17190 Trifolium pratense HOM05D003396 ORTHO05D003646 7.0e-06 55.1 26 96.2
MSTRG.20035 Avicennia marina HOM05D003396 ORTHO05D003646 9.1e-06 54.7 40 65.0
TAR623G1083 Trochodendron aralioides HOM05D003183 ORTHO05D003697 9.1e-06 54.7 100 41.0
TAR623G1770 Trochodendron aralioides HOM05D003183 ORTHO05D003697 9.1e-06 54.7 100 41.0


User provided reference genes

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