Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0720G0119 Vigna mungo HOM05D002551 ORTHO05D002832 1.1e-142 510.0 265 100.0
VMungo0331G0684 Vigna mungo HOM05D002551 ORTHO05D002832 2.1e-53 213.4 153 74.5
VMungo0720G2384 Vigna mungo HOM05D002551 ORTHO05D002832 6.9e-52 208.4 155 74.8
Glyma.20G146200 Glycine max HOM05D002551 ORTHO05D002832 1.2e-51 207.6 159 71.1
Glyma.20G148200 Glycine max HOM05D002551 ORTHO05D002832 1.2e-51 207.6 159 71.1
Glyma.10G246300 Glycine max HOM05D002551 ORTHO05D002832 2.9e-50 203.0 159 67.9
VMungo0720G0948 Vigna mungo HOM05D002551 ORTHO05D002832 1.1e-49 201.1 166 68.7
Phvul.007G059800 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 2.4e-49 199.9 160 70.0
Glyma.20G148300 Glycine max HOM05D002551 ORTHO05D002832 3.2e-49 199.5 159 68.6
Glyma.20G148400 Glycine max HOM05D002551 ORTHO05D002832 3.2e-49 199.5 159 68.6
Medtr1g103400 Medicago truncatula HOM05D002551 ORTHO05D002832 1.5e-43 180.6 163 59.5
Glyma.10G246500 Glycine max HOM05D002551 ORTHO05D002832 3.4e-43 179.5 143 67.1
Psat6g206200 Pisum sativum HOM05D002551 ORTHO05D002832 2.4e-41 173.3 161 54.0
Ca_10865_v3 Cicer arietinum L. HOM05D002551 ORTHO05D002832 7.1e-41 171.8 156 58.3
Psat6g206160 Pisum sativum HOM05D002551 ORTHO05D002832 1.6e-40 170.6 160 54.4
Ca_10867_v3 Cicer arietinum L. HOM05D002551 ORTHO05D002832 5.1e-39 165.6 162 54.9
Phvul.007G059750 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 7.4e-38 161.8 149 62.4
Phvul.007G059775 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 7.4e-38 161.8 149 62.4
Lalb_Chr06g0170441 Lupinus albus HOM05D002551 ORTHO05D002832 8.1e-37 158.3 164 55.5
Phvul.007G059700 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 8.1e-37 158.3 157 59.2
Phvul.007G059725 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 8.1e-37 158.3 157 59.2
Phvul.007G060000 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 8.1e-37 158.3 157 59.2
TPR.G28217 Trifolium pratense HOM05D002551 ORTHO05D002832 1.1e-36 157.9 162 54.3
Lj5g0023246 Lotus japonicus HOM05D002551 ORTHO05D002832 6.9e-36 155.2 162 55.6
Psat5g199920 Pisum sativum HOM05D002551 ORTHO05D002832 2.0e-35 153.7 164 48.8
TPR.G21111 Trifolium pratense HOM05D002551 ORTHO05D002832 3.4e-35 152.9 165 52.1
Lalb_Chr06g0170401 Lupinus albus HOM05D002551 ORTHO05D002832 1.3e-34 151.0 139 60.4
Lalb_Chr06g0170411 Lupinus albus HOM05D002551 ORTHO05D002832 1.7e-34 150.6 170 50.6
Lalb_Chr06g0170421 Lupinus albus HOM05D002551 ORTHO05D002832 1.7e-34 150.6 170 50.6
Psat0s5g0160 Pisum sativum HOM05D002551 ORTHO05D002832 1.7e-34 150.6 164 50.0
Medtr7g079730 Medicago truncatula HOM05D002551 ORTHO05D002832 2.2e-34 150.2 165 52.1
Medtr7g079820 Medicago truncatula HOM05D002551 ORTHO05D002832 2.2e-34 150.2 165 52.1
Lalb_Chr06g0170451 Lupinus albus HOM05D002551 ORTHO05D002832 4.9e-34 149.1 158 53.8
TPR.G20826 Trifolium pratense HOM05D002551 ORTHO05D002832 4.9e-34 149.1 163 52.8
Medtr7g079770 Medicago truncatula HOM05D002551 ORTHO05D002832 2.5e-33 146.7 164 50.0
Medtr7g079740 Medicago truncatula HOM05D002551 ORTHO05D002832 7.1e-33 145.2 167 50.3
Lj5g0023538 Lotus japonicus HOM05D002551 ORTHO05D002832 1.6e-32 144.1 160 53.8
TPR.G5454 Trifolium pratense HOM05D002551 ORTHO05D002832 2.7e-32 143.3 156 52.6
Medtr7g079780 Medicago truncatula HOM05D002551 ORTHO05D002832 3.5e-32 142.9 272 40.1
arahy.Tifrunner.gnm1.ann1.E5WGR0 Arachis hypogaea HOM05D002551 ORTHO05D002832 4.6e-32 142.5 291 37.1
arahy.Tifrunner.gnm1.ann1.6TFR0H Arachis hypogaea HOM05D002551 ORTHO05D002832 6.0e-32 142.1 187 48.1
Lalb_Chr22g0356821 Lupinus albus HOM05D002551 ORTHO05D002832 7.9e-32 141.7 137 54.0
TPR.G36160 Trifolium pratense HOM05D002551 ORTHO05D002832 6.7e-31 138.7 150 54.7
TPR.G13825 Trifolium pratense HOM05D002551 ORTHO05D002832 5.7e-30 135.6 153 52.3
TPR.G30360 Trifolium pratense HOM05D002551 ORTHO05D002832 1.3e-29 134.4 143 53.8
Psat5g216000 Pisum sativum HOM05D002551 ORTHO05D002832 3.4e-27 126.3 166 48.2
CANSAT78G2456 Cannabis sativa HOM05D002551 ORTHO05D002832 1.1e-25 121.3 163 40.5
CANSAT78G1619 Cannabis sativa HOM05D002551 ORTHO05D002832 4.2e-25 119.4 164 39.0
CiPaw.01G198100 Carya illinoinensis HOM05D002551 ORTHO05D002832 1.0e-23 114.8 168 38.7
Haze_11204 Corylus avellana HOM05D002551 ORTHO05D002832 9.7e-22 108.2 167 39.5
FAN17G0400 Fragaria x ananassa HOM05D002551 ORTHO05D002832 1.1e-20 104.8 168 38.1
FAN22G0282 Fragaria x ananassa HOM05D002551 ORTHO05D002832 1.1e-20 104.8 168 38.1
RcHm_v2.0_Chr4g0415511 Rosa chinensis HOM05D002551 ORTHO05D002832 2.4e-20 103.6 156 40.4
Cfa008469 Carpinus fangiana HOM05D002551 ORTHO05D002832 4.1e-20 102.8 167 38.3
TWI73G1150 Tripterygium wilfordii HOM05D002551 ORTHO05D002832 5.3e-20 102.4 163 38.0
MD13G1196800 Malus domestica HOM05D002551 ORTHO05D002832 6.9e-20 102.1 168 33.9
Prupe.1G018000 Prunus persica HOM05D002551 ORTHO05D002832 1.2e-19 101.3 161 37.9
Ah.07g204210 Amaranthus hybridus HOM05D002551 ORTHO05D002832 1.5e-19 100.9 158 36.1
QL06p001653 Quercus lobata HOM05D002551 ORTHO05D002832 3.4e-19 99.8 167 35.9
MD16G1197200 Malus domestica HOM05D002551 ORTHO05D002832 1.0e-18 98.2 168 35.1
Sed0010447 Sechium edule HOM05D002551 ORTHO05D002832 1.7e-18 97.4 144 34.7
TAR362G0951 Trochodendron aralioides HOM05D002551 ORTHO05D002832 8.5e-18 95.1 157 36.3
Aqoxy5G03465 Aquilegia oxysepala HOM05D002551 ORTHO05D002832 1.1e-17 94.7 174 35.1
Psat0s4851g0160 Pisum sativum HOM05D002551 ORTHO05D002832 1.1e-17 94.7 105 51.4
Aqoxy5G03501 Aquilegia oxysepala HOM05D002551 ORTHO05D002832 1.4e-17 94.4 174 35.6
CAN.G1699.1 Capsicum annuum HOM05D002551 ORTHO05D002832 3.2e-17 93.2 174 33.9
EL10Ac3g06479 Beta vulgaris HOM05D002551 ORTHO05D002832 5.5e-17 92.4 143 34.3
AUR62034727 Chenopodium quinoa HOM05D002551 ORTHO05D002832 5.5e-17 92.4 143 35.7
AUR62033661 Chenopodium quinoa HOM05D002551 ORTHO05D002832 7.2e-17 92.0 142 35.9
ClCG05G005030 Citrullus lanatus HOM05D002551 ORTHO05D002832 1.6e-16 90.9 174 32.2
CAN.G1476.2 Capsicum annuum HOM05D002551 ORTHO05D002832 2.1e-16 90.5 174 32.2
MELO3C006516.2 Cucumis melo HOM05D002551 ORTHO05D002832 2.1e-16 90.5 175 29.7
COL.COLO4_21520 Corchorus olitorius HOM05D002551 ORTHO05D002832 4.6e-16 89.4 166 33.7
Peaxi162Scf00092g00216 Petunia axillaris HOM05D002551 ORTHO05D002832 4.6e-16 89.4 175 33.7
Aqoxy5G00432 Aquilegia oxysepala HOM05D002551 ORTHO05D002832 7.9e-16 88.6 160 34.4
Sopen09g031220 Solanum pennellii HOM05D002551 ORTHO05D002832 1.4e-15 87.8 180 33.9
PSO210G2787 Papaver somniferum HOM05D002551 ORTHO05D002832 1.8e-15 87.4 157 35.7
PSO832G2004 Papaver somniferum HOM05D002551 ORTHO05D002832 1.8e-15 87.4 157 35.7
Hund12100 Selenicereus undatus HOM05D002551 ORTHO05D002832 1.8e-15 87.4 138 37.7
Solyc09g082340.2 Solanum lycopersicum HOM05D002551 ORTHO05D002832 1.8e-15 87.4 180 33.9
TPR.G17620 Trifolium pratense HOM05D002551 ORTHO05D002832 1.8e-15 87.4 79 54.4
Nitab4.5_0004062g0010 Nicotiana tabacum HOM05D002551 ORTHO05D002832 2.3e-15 87.0 176 32.4
PSO761G0632 Papaver somniferum HOM05D002551 ORTHO05D002832 3.9e-15 86.3 167 32.3
Prupe.1G017700 Prunus persica HOM05D002551 ORTHO05D002832 6.7e-15 85.5 153 34.0
PGSC0003DMG400032247 Solanum tuberosum HOM05D002551 ORTHO05D002832 6.7e-15 85.5 178 36.0
Gohir.D09G220000 Gossypium hirsutum HOM05D002551 ORTHO05D002832 8.8e-15 85.1 191 33.0
Gorai.006G241000 Gossypium raimondii HOM05D002551 ORTHO05D002832 8.8e-15 85.1 191 34.6
Sed0020861 Sechium edule HOM05D002551 ORTHO05D002832 8.8e-15 85.1 131 34.4
Thecc.04G235500 Theobroma cacao HOM05D002551 ORTHO05D002832 8.8e-15 85.1 173 34.7
Nitab4.5_0002307g0030 Nicotiana tabacum HOM05D002551 ORTHO05D002832 1.1e-14 84.7 176 31.8
PSO761G0488 Papaver somniferum HOM05D002551 ORTHO05D002832 1.1e-14 84.7 173 34.7
TPR.G18515 Trifolium pratense HOM05D002551 ORTHO05D002832 1.5e-14 84.3 102 50.0
CsaV3_3G013090 Cucumis sativus L. HOM05D002551 ORTHO05D002832 3.3e-14 83.2 176 30.7
Gohir.A09G217600 Gossypium hirsutum HOM05D002551 ORTHO05D002832 3.3e-14 83.2 176 34.7
PSO210G4289 Papaver somniferum HOM05D002551 ORTHO05D002832 3.3e-14 83.2 173 34.1
Migut.G00363 Erythranthe guttata HOM05D002551 ORTHO05D002832 7.4e-14 82.0 169 33.1
PSO210G0706 Papaver somniferum HOM05D002551 ORTHO05D002832 7.4e-14 82.0 163 33.1
SHI00485 Sapria himalayana HOM05D002551 ORTHO05D002832 7.4e-14 82.0 170 32.9
Nitab4.5_0004062g0030 Nicotiana tabacum HOM05D002551 ORTHO05D002832 2.8e-13 80.1 159 32.1
GSVIVG01001186001 Vitis vinifera HOM05D003028 ORTHO05D003465 8.2e-13 78.6 143 36.4
PSO832G4341 Papaver somniferum HOM05D002551 ORTHO05D002832 1.1e-12 78.2 144 34.7
SGA_v2.0_scaffold191G40490 Striga asiatica HOM05D002551 ORTHO05D002832 1.1e-12 78.2 163 33.1
CDE07G1821 Ceratophyllum demersum HOM05D003259 ORTHO05D002832 1.8e-12 77.4 116 38.8
Sopen09g031210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-12 77.4 141 31.2
Cpa.g.sc52.61 Carica papaya HOM05D002551 ORTHO05D002832 2.4e-12 77.0 140 32.9
Solyc09g082330.2 Solanum lycopersicum HOM05D002551 ORTHO05D002832 2.4e-12 77.0 144 30.6
CAN.G1094.28 Capsicum annuum HOM05D002551 ORTHO05D002832 3.1e-12 76.6 158 31.6
Cpa.g.sc54.82 Carica papaya HOM05D002551 ORTHO05D002832 3.1e-12 76.6 162 32.7
Cfa006172 Carpinus fangiana HOM05D002551 ORTHO05D002832 1.2e-11 74.7 145 35.2
Haze_04679 Corylus avellana HOM05D002551 ORTHO05D002832 1.2e-11 74.7 145 35.2
Ciclev10006494m.g Citrus clementina HOM05D002551 ORTHO05D002832 1.5e-11 74.3 116 38.8
Sp3g20400 Schrenkiella parvula HOM05D002551 ORTHO05D002832 1.5e-11 74.3 170 30.6
CAN.G1094.27 Capsicum annuum HOM05D002551 ORTHO05D002832 2.0e-11 73.9 157 33.8
MBI01_g44542_MAGBIO Magnolia biondii HOM05D002551 ORTHO05D002832 2.0e-11 73.9 158 31.0
Manes.05G079100 Manihot esculenta HOM05D002551 ORTHO05D002832 2.0e-11 73.9 152 35.5
RcHm_v2.0_Chr6g0290441 Rosa chinensis HOM05D002551 ORTHO05D002832 2.0e-11 73.9 150 34.0
Sopen09g031230 Solanum pennellii HOM05D002551 ORTHO05D002832 2.0e-11 73.9 172 30.2
Cpa.g.sc58.77 Carica papaya HOM05D002551 ORTHO05D002832 2.6e-11 73.6 195 28.7
THA.LOC104822265 Tarenaya hassleriana HOM05D002551 ORTHO05D002832 3.4e-11 73.2 165 30.3
FvH4_2g23190 Fragaria vesca HOM05D002551 ORTHO05D002832 4.5e-11 72.8 150 33.3
Lj9C529T11 Lonicera japonica HOM05D002551 ORTHO05D002832 4.5e-11 72.8 154 34.4
Manes.05G078900 Manihot esculenta HOM05D002551 ORTHO05D002832 5.9e-11 72.4 152 34.2
Aa31LG8G9150 Aethionema arabicum HOM05D002551 ORTHO05D002832 7.7e-11 72.0 174 32.2
Gohir.A09G217700 Gossypium hirsutum HOM05D002551 ORTHO05D002832 7.7e-11 72.0 160 35.6
CANSAT25G1299 Cannabis sativa HOM05D002551 ORTHO05D002832 1.3e-10 71.2 146 32.9
ATR0665G664 Amborella trichopoda HOM05D002551 ORTHO05D002832 1.7e-10 70.9 235 26.4
AL3G36950 Arabidopsis lyrata HOM05D002551 ORTHO05D002832 1.7e-10 70.9 168 31.0
FAN20G1127 Fragaria x ananassa HOM05D002551 ORTHO05D002832 1.7e-10 70.9 150 33.3
Manes.05G079000 Manihot esculenta HOM05D002551 ORTHO05D002832 2.9e-10 70.1 148 32.4
Aqoxy2G03431 Aquilegia oxysepala HOM05D002551 ORTHO05D002832 5.0e-10 69.3 211 28.0
Dinv34780 Davidia involucrata HOM05D002551 ORTHO05D002832 6.5e-10 68.9 196 31.1
Migut.O00476 Erythranthe guttata HOM05D002551 ORTHO05D002832 6.5e-10 68.9 140 32.1
Nn1g02380 Nelumbo nucifera HOM05D002551 ORTHO05D002832 6.5e-10 68.9 139 33.1
FAN15G1237 Fragaria x ananassa HOM05D002551 ORTHO05D002832 8.5e-10 68.6 150 32.0
Actinidia21130 Actinidia chinensis HOM05D002551 ORTHO05D002832 1.1e-09 68.2 159 30.2
BcaB04g20507 Brassica carinata HOM05D002551 ORTHO05D002832 1.1e-09 68.2 148 32.4
Potri.006G002500 Populus trichocarpa HOM05D002551 ORTHO05D002832 1.1e-09 68.2 144 33.3
Sed0017724 Sechium edule HOM05D002551 ORTHO05D002832 1.1e-09 68.2 148 29.1
PGSC0003DMG400019354 Solanum tuberosum HOM05D002551 ORTHO05D002832 1.1e-09 68.2 167 32.9
MBI01_g44541_MAGBIO Magnolia biondii HOM05D002551 ORTHO05D002832 1.4e-09 67.8 181 26.5
GSVIVG01001185001 Vitis vinifera HOM05D002551 ORTHO05D002832 1.4e-09 67.8 136 33.1
Aqoxy2G03428 Aquilegia oxysepala HOM05D002551 ORTHO05D002832 1.9e-09 67.4 145 31.7
AUR62032318 Chenopodium quinoa HOM05D002551 ORTHO05D002832 1.9e-09 67.4 142 31.7
Migut.N02035 Erythranthe guttata HOM05D002551 ORTHO05D002832 1.9e-09 67.4 149 30.2
Thhalv10021982m.g Eutrema salsugineum HOM05D002551 ORTHO05D002832 1.9e-09 67.4 175 30.9
Gorai.006G241100 Gossypium raimondii HOM05D002551 ORTHO05D002832 1.9e-09 67.4 162 32.1
Gohir.D09G220100 Gossypium hirsutum HOM05D002551 ORTHO05D002832 2.5e-09 67.0 162 34.6
Manes.05G078850 Manihot esculenta HOM05D002551 ORTHO05D002832 3.2e-09 66.6 145 31.0
MD03G1261200 Malus domestica HOM05D002551 ORTHO05D002832 4.2e-09 66.2 152 34.2
Rhsim01G0273000 Rhododendron simsii HOM05D002551 ORTHO05D002832 4.2e-09 66.2 158 29.1
TAR633G2055 Trochodendron aralioides HOM05D002551 ORTHO05D002832 4.2e-09 66.2 157 32.5
AUR62028591 Chenopodium quinoa HOM05D002551 ORTHO05D002832 5.5e-09 65.9 142 31.0
HanXRQChr05g0154401 Helianthus annuus HOM05D002551 ORTHO05D002832 1.2e-08 64.7 136 33.8
Nitab4.5_0001729g0060 Nicotiana tabacum HOM05D002551 ORTHO05D002832 1.6e-08 64.3 194 26.8
CiPaw.08G107900 Carya illinoinensis HOM05D002551 ORTHO05D002832 2.1e-08 63.9 155 35.5
MD16G1197100 Malus domestica HOM05D002551 ORTHO05D002832 2.1e-08 63.9 139 30.9
DCAR_005862 Daucus carota HOM05D002551 ORTHO05D002832 2.7e-08 63.5 139 30.2
Lsat_1_v5_gn_9_6181 Lactuca sativa HOM05D002551 ORTHO05D002832 2.7e-08 63.5 134 32.1
SGA_v2.0_scaffold81G26035 Striga asiatica HOM05D002551 ORTHO05D002832 2.7e-08 63.5 170 29.4
Actinidia24912 Actinidia chinensis HOM05D002551 ORTHO05D002832 3.6e-08 63.2 161 27.3
Eucgr.D01140 Eucalyptus grandis HOM05D002551 ORTHO05D002832 3.6e-08 63.2 160 31.2
PGR004G1796 Punica granatum HOM05D002551 ORTHO05D002832 3.6e-08 63.2 152 28.9
Atru.chr5.1483 Acer truncatum HOM05D002551 ORTHO05D002832 7.9e-08 62.0 140 29.3
Psat0s3959g0040 Pisum sativum HOM05D002551 ORTHO05D002832 7.9e-08 62.0 101 39.6
Ah.02g111200 Amaranthus hybridus HOM05D002551 ORTHO05D002832 1.0e-07 61.6 161 29.2
CsaV3_7G027740 Cucumis sativus L. HOM05D002551 ORTHO05D002832 1.0e-07 61.6 152 26.3
Dinv32904 Davidia involucrata HOM05D002551 ORTHO05D002832 1.0e-07 61.6 143 30.8
ECA247G2018 Erigeron canadensis HOM05D002551 ORTHO05D002832 1.8e-07 60.8 133 30.1
Nitab4.5_0000252g0060 Nicotiana tabacum HOM05D002551 ORTHO05D002832 3.9e-07 59.7 162 29.6
Peaxi162Scf00230g00127 Petunia axillaris HOM05D002551 ORTHO05D002832 3.9e-07 59.7 143 32.2
EL10Ac5g10531 Beta vulgaris HOM05D002551 ORTHO05D002832 6.7e-07 58.9 157 28.0
Prupe.8G237500 Prunus persica HOM05D002551 ORTHO05D002832 6.7e-07 58.9 153 29.4
Solyc09g065470.3 Solanum lycopersicum HOM05D002551 ORTHO05D002832 1.5e-06 57.8 135 31.1
vmacro14908 Vaccinium macrocarpon HOM05D002551 ORTHO05D002832 1.5e-06 57.8 160 28.8
VMungo0720G1623 Vigna mungo HOM05D002551 ORTHO05D002832 1.5e-06 57.8 127 31.5
arahy.Tifrunner.gnm1.ann1.WD5WT3 Arachis hypogaea HOM05D002551 ORTHO05D002832 2.0e-06 57.4 134 30.6
DCAR_021445 Daucus carota HOM05D001788 ORTHO05D006995 2.0e-06 57.4 142 31.0
Phvul.007G173600 Phaseolus vulgaris HOM05D002551 ORTHO05D002832 2.6e-06 57.0 127 29.9
CDE04G2296 Ceratophyllum demersum HOM05D002551 ORTHO05D002832 5.7e-06 55.8 144 27.1
Glyma.02G145700 Glycine max HOM05D002551 ORTHO05D002832 9.7e-06 55.1 140 28.6


User provided reference genes

Program Settings