Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 3.2e-248 861.3 429 100.0
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.4e-203 713.0 431 82.4
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 5.8e-202 707.6 380 92.6
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 9.7e-173 610.5 432 70.6
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.5e-170 603.2 429 70.6
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 7.7e-170 600.9 425 68.9
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.0e-169 600.5 424 70.5
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 5.3e-163 578.2 425 68.2
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.7e-156 556.6 427 67.9
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 8.0e-143 511.1 427 63.9
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.6e-135 486.9 418 59.6
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.8e-134 483.4 352 73.0
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 8.9e-134 481.1 420 59.0
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 5.8e-133 478.4 425 59.1
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 4.9e-132 475.3 431 57.8
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 6.4e-132 474.9 430 57.4
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.9e-131 473.4 427 56.4
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 7.0e-131 471.5 428 56.3
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 9.2e-131 471.1 430 57.0
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.6e-130 470.3 432 56.7
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 2.0e-130 469.9 431 55.9
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.3e-129 466.5 430 57.0
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.8e-127 459.5 443 53.7
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 6.2e-127 458.4 421 56.3
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 3.1e-126 456.1 422 54.0
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 3.1e-126 456.1 430 55.1
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 6.8e-126 454.9 436 53.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 1.2e-125 454.1 425 55.5
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.0e-125 453.4 438 57.1
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 7.5e-125 451.4 435 56.6
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 7.5e-125 451.4 421 56.3
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 9.8e-125 451.1 431 56.6
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.7e-124 450.3 420 53.3
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 2.2e-124 449.9 439 53.3
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 3.7e-124 449.1 431 55.9
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 4.9e-124 448.7 428 52.6
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 6.4e-124 448.4 426 54.2
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.3e-124 448.0 425 55.8
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.1e-123 447.6 433 55.0
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 2.4e-123 446.4 423 55.6
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 5.4e-123 445.3 436 53.9
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 4.6e-122 442.2 417 53.2
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 6.0e-122 441.8 434 55.3
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 7.8e-122 441.4 422 52.6
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 1.3e-121 440.7 424 53.8
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 3.9e-121 439.1 429 53.4
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 6.6e-121 438.3 430 51.9
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 6.6e-121 438.3 427 55.7
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.5e-120 437.2 423 54.8
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 3.6e-119 432.6 423 51.8
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.6e-119 432.6 437 52.6
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.8e-118 430.3 423 51.8
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.8e-118 430.3 431 52.0
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.8e-118 430.3 425 54.1
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 2.3e-118 429.9 428 51.4
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.3e-118 429.9 431 52.7
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 3.1e-118 429.5 434 54.4
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 5.2e-118 428.7 426 51.2
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 5.2e-118 428.7 426 54.7
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 2.6e-117 426.4 422 54.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 3.4e-117 426.0 473 49.5
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.3e-116 424.1 437 51.0
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.2e-115 419.5 453 49.4
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.2e-115 419.5 453 49.4
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.2e-115 419.5 421 54.6
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 7.1e-115 418.3 423 52.7
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 7.1e-115 418.3 549 44.8
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 9.2e-115 417.9 429 50.6
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.6e-114 417.2 426 50.9
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 2.7e-114 416.4 431 50.6
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.5e-114 416.0 478 49.2
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 6.0e-114 415.2 409 53.1
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 5.6e-112 408.7 331 60.7
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 5.6e-112 408.7 428 52.3
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 8.1e-111 404.8 446 47.8
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.3e-105 387.5 426 48.1
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.3e-105 386.7 444 47.7
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.1e-104 384.4 388 52.3
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 4.3e-104 382.5 380 51.8
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 1.6e-103 380.6 333 55.6
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.8e-102 377.1 381 52.8
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 7.6e-101 371.7 408 46.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.6e-98 364.0 449 45.9
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 6.6e-97 358.6 435 46.9
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.9e-96 357.1 453 45.9
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.1e-94 351.3 459 45.5
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.1e-90 337.0 338 52.4
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 3.4e-85 319.7 358 50.0
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.4e-85 319.7 427 43.8
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 6.5e-84 315.5 389 46.5
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 8.7e-81 305.1 437 41.4
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 8.2e-79 298.5 410 41.5
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.0e-78 296.2 428 40.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 2.5e-72 276.9 242 51.2
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 8.2e-71 271.9 365 43.8
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 3.4e-69 266.5 344 47.1
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 6.3e-63 245.7 367 41.1
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 5.9e-61 239.2 160 67.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.8e-55 220.3 317 39.7
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 6.5e-52 209.1 191 48.7
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 5.2e-49 199.5 391 31.7
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 1.1e-43 181.8 238 50.8
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.1e-38 165.2 242 39.3
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 7.7e-37 159.1 229 42.4
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 7.5e-32 142.5 86 79.1
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.4e-22 110.9 165 44.2
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.4e-17 95.1 221 29.4
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 8.3e-15 85.9 67 56.7
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 2.0e-13 81.3 127 40.2
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 3.6e-10 70.5 153 35.9
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.9e-07 60.8 94 50.0
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 7.1e-06 56.2 45 62.2


User provided reference genes

Program Settings