Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0647G1736 Vigna mungo HOM05D004288 ORTHO05D004997 2.0e-74 282.3 145 100.0
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 1.1e-27 127.1 155 56.1
Phvul.001G026400 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 3.5e-26 122.1 145 54.5
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 1.9e-24 116.3 152 52.0
VMungo0647G1919 Vigna mungo HOM05D004288 ORTHO05D004997 4.3e-24 115.2 155 52.9
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 4.5e-21 105.1 151 50.3
VMungo0647G1883 Vigna mungo HOM05D004288 ORTHO05D004997 7.1e-19 97.8 146 48.6
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 5.3e-14 81.6 81 50.6
TPR.G3776 Trifolium pratense HOM05D004288 ORTHO05D004997 9.0e-14 80.9 90 52.2
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 9.0e-14 80.9 101 47.5
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.0e-13 79.7 80 51.2
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.0e-13 79.7 80 51.2
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 7.7e-13 77.8 119 42.9
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.0e-12 77.4 116 42.2
Medtr1g018470 Medicago truncatula HOM05D004288 ORTHO05D004997 1.7e-12 76.6 80 55.0
Medtr1g418505 Medicago truncatula HOM05D004288 ORTHO05D004997 1.7e-12 76.6 80 55.0
Lj6g0004688 Lotus japonicus HOM05D004288 ORTHO05D004997 2.2e-12 76.3 116 45.7
Psat6g015560 Pisum sativum HOM05D004288 ORTHO05D004997 2.2e-12 76.3 83 55.4
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 5.0e-12 75.1 146 36.3
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 5.0e-12 75.1 82 51.2
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 8.5e-12 74.3 144 37.5
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.1e-11 73.9 90 45.6
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 1.9e-11 73.2 153 35.9
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 2.5e-11 72.8 144 36.1
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 4.2e-11 72.0 121 38.8
Psat6g016040 Pisum sativum HOM05D004288 ORTHO05D004997 5.5e-11 71.6 122 44.3
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 7.2e-11 71.2 107 42.1
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 9.4e-11 70.9 83 49.4
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 1.2e-10 70.5 97 44.3
Lj3g0011225 Lotus japonicus HOM05D004288 ORTHO05D004997 1.6e-10 70.1 141 42.6
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.7e-10 69.3 80 47.5
Lj1g0008863 Lotus japonicus HOM05D004288 ORTHO05D004997 2.7e-10 69.3 148 39.9
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 3.6e-10 68.9 90 45.6
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 3.6e-10 68.9 142 38.7
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 4.6e-10 68.6 63 55.6
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 4.6e-10 68.6 73 47.9
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 4.6e-10 68.6 77 46.8
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 6.1e-10 68.2 80 45.0
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 7.9e-10 67.8 120 37.5
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.0e-09 67.4 90 43.3
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 1.0e-09 67.4 90 43.3
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 1.0e-09 67.4 147 36.1
Dinv39247 Davidia involucrata HOM05D004288 ORTHO05D004997 1.8e-09 66.6 80 46.2
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 2.3e-09 66.2 92 45.7
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 2.3e-09 66.2 92 40.2
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.0e-09 65.9 83 44.6
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 3.9e-09 65.5 90 43.3
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 3.9e-09 65.5 79 43.0
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 5.1e-09 65.1 76 47.4
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 6.7e-09 64.7 89 40.4
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 6.7e-09 64.7 123 39.8
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 6.7e-09 64.7 127 40.9
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 8.8e-09 64.3 78 44.9
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 8.8e-09 64.3 72 47.2
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 8.8e-09 64.3 83 44.6
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 8.8e-09 64.3 73 47.9
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 8.8e-09 64.3 92 44.6
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 8.8e-09 64.3 62 56.5
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 8.8e-09 64.3 64 53.1
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 1.5e-08 63.5 83 43.4
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.5e-08 63.5 92 44.6
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.5e-08 63.5 60 55.0
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 2.0e-08 63.2 61 54.1
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 2.5e-08 62.8 102 40.2
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 3.3e-08 62.4 75 45.3
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 3.3e-08 62.4 102 40.2
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 3.3e-08 62.4 60 55.0
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 4.3e-08 62.0 72 47.2
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 4.3e-08 62.0 60 51.7
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 5.7e-08 61.6 61 50.8
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 5.7e-08 61.6 151 35.8
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 5.7e-08 61.6 68 50.0
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 7.4e-08 61.2 116 37.1
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 9.7e-08 60.8 57 50.9
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 9.7e-08 60.8 57 50.9
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 1.3e-07 60.5 99 43.4
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 1.7e-07 60.1 60 53.3
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 1.7e-07 60.1 77 46.8
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 1.7e-07 60.1 58 53.4
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 2.2e-07 59.7 75 46.7
unitig_8.g4880 Utricularia gibba HOM05D004288 ORTHO05D004997 2.2e-07 59.7 96 41.7
Lalb_Chr11g0062841 Lupinus albus HOM05D004288 ORTHO05D004997 2.8e-07 59.3 146 32.2
Lalb_Chr23g0267451 Lupinus albus HOM05D004288 ORTHO05D004997 2.8e-07 59.3 147 36.1
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 2.8e-07 59.3 69 46.4
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.7e-07 58.9 65 49.2
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 4.8e-07 58.5 59 52.5
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.8e-07 58.5 64 48.4
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 6.3e-07 58.2 70 50.0
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 6.3e-07 58.2 80 42.5
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 6.3e-07 58.2 107 42.1
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 8.2e-07 57.8 78 43.6
Lsat_1_v5_gn_4_130821 Lactuca sativa HOM05D004288 ORTHO05D004997 8.2e-07 57.8 58 56.9
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 8.2e-07 57.8 45 53.3
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.1e-06 57.4 156 34.0
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 1.1e-06 57.4 50 58.0
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 1.4e-06 57.0 58 58.6
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 1.4e-06 57.0 47 51.1
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 1.4e-06 57.0 68 47.1
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 1.8e-06 56.6 64 46.9
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 1.8e-06 56.6 74 41.9
Carub.0006s0080 Capsella rubella HOM05D004288 ORTHO05D004997 2.4e-06 56.2 47 59.6
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 2.4e-06 56.2 60 50.0
Sed0026714 Sechium edule HOM05D004288 ORTHO05D004997 3.1e-06 55.8 55 50.9
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 4.1e-06 55.5 114 37.7
BcaB05g21897 Brassica carinata HOM05D004288 ORTHO05D004997 5.3e-06 55.1 43 58.1
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 5.3e-06 55.1 67 50.7
Migut.N02769 Erythranthe guttata HOM05D004288 ORTHO05D004997 5.3e-06 55.1 50 56.0
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 5.3e-06 55.1 64 45.3
PGR031G3267 Punica granatum HOM05D004288 ORTHO05D004997 5.3e-06 55.1 62 50.0
BraA02t04704Z Brassica rapa HOM05D004288 ORTHO05D004997 6.9e-06 54.7 46 58.7
MELO3C032376.2 Cucumis melo HOM05D004288 ORTHO05D004997 6.9e-06 54.7 46 50.0
DCAR_008852 Daucus carota HOM05D004288 ORTHO05D004997 6.9e-06 54.7 63 49.2
FAN20G2816 Fragaria x ananassa HOM05D004288 ORTHO05D004997 6.9e-06 54.7 117 36.8
HanXRQChr11g0341661 Helianthus annuus HOM05D004288 ORTHO05D004997 6.9e-06 54.7 62 53.2
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 6.9e-06 54.7 119 33.6
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 6.9e-06 54.7 77 42.9
BcaC03g13064 Brassica carinata HOM05D004288 ORTHO05D004997 9.1e-06 54.3 46 58.7
C02p00310 Brassica napus HOM05D004288 ORTHO05D004997 9.1e-06 54.3 46 58.7


User provided reference genes

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