Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 1.0e-179 633.3 313 100.0
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 3.2e-165 585.1 312 94.2
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 2.6e-151 538.9 309 85.8
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 3.2e-117 425.6 313 70.0
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 6.5e-110 401.4 318 66.4
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 7.2e-109 397.9 316 64.6
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 8.8e-107 391.0 318 65.4
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 2.0e-106 389.8 286 69.6
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 2.0e-106 389.8 321 63.9
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 1.6e-103 380.2 280 70.4
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 1.7e-102 376.7 280 70.0
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 2.0e-98 363.2 274 65.7
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 3.4e-98 362.5 318 60.1
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 6.3e-97 358.2 273 64.5
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 8.3e-97 357.8 318 60.1
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 1.8e-96 356.7 275 64.7
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 4.1e-96 355.5 258 66.7
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 5.4e-96 355.1 275 64.4
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 5.4e-96 355.1 275 64.4
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 5.4e-96 355.1 316 59.8
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 7.0e-96 354.8 275 64.4
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 9.1e-96 354.4 321 56.4
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 1.6e-95 353.6 274 64.2
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 1.6e-95 353.6 277 62.5
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 2.0e-95 353.2 276 62.7
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 4.5e-95 352.1 276 62.3
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 4.5e-95 352.1 279 62.4
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.0e-94 350.9 275 63.3
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 1.0e-94 350.9 275 64.0
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 1.0e-94 350.9 321 57.9
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.0e-94 350.9 314 57.3
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 1.7e-94 350.1 275 63.3
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.7e-94 350.1 255 66.7
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 1.9e-93 346.7 313 56.9
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 2.5e-93 346.3 277 63.2
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 2.5e-93 346.3 272 62.9
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 3.3e-93 345.9 278 62.2
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 4.2e-93 345.5 315 58.1
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 4.2e-93 345.5 318 57.5
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 4.2e-93 345.5 278 62.2
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 5.5e-93 345.1 278 63.3
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 7.2e-93 344.7 277 62.8
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 1.2e-92 344.0 278 63.3
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 1.2e-92 344.0 278 63.3
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 1.6e-92 343.6 318 57.9
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.6e-92 343.6 274 63.5
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 1.6e-92 343.6 277 61.4
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 2.8e-92 342.8 277 62.8
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 2.8e-92 342.8 275 63.3
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 3.6e-92 342.4 279 62.4
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 3.6e-92 342.4 276 63.0
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 4.7e-92 342.0 272 61.8
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 6.1e-92 341.7 281 61.9
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 6.1e-92 341.7 275 61.1
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 8.0e-92 341.3 318 57.5
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 8.0e-92 341.3 282 59.9
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 1.0e-91 340.9 277 60.6
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.8e-91 340.1 315 55.6
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 2.3e-91 339.7 275 64.4
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 6.8e-91 338.2 259 64.5
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 2.6e-90 336.3 269 62.5
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 2.6e-90 336.3 269 63.9
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 7.5e-90 334.7 275 62.2
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 9.8e-90 334.3 276 61.6
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 9.8e-90 334.3 276 61.6
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 4.9e-89 332.0 277 60.6
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 6.3e-89 331.6 277 61.0
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 8.3e-89 331.3 251 64.1
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 8.3e-89 331.3 277 60.6
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 1.1e-88 330.9 285 57.5
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 9.2e-88 327.8 266 60.9
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 2.7e-87 326.2 333 53.5
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 2.7e-87 326.2 248 62.5
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 3.5e-87 325.9 342 51.8
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 3.5e-87 325.9 305 56.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 7.8e-87 324.7 275 60.4
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 1.0e-86 324.3 313 55.0
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 1.3e-86 323.9 251 61.8
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 3.8e-86 322.4 275 60.4
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 2.5e-85 319.7 275 60.4
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 1.2e-84 317.4 277 58.1
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 3.6e-84 315.8 291 55.0
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 4.7e-84 315.5 278 59.7
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 1.4e-83 313.9 306 54.9
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 2.3e-83 313.2 281 58.0
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 3.1e-83 312.8 286 57.7
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 6.4e-81 305.1 223 65.9
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 6.4e-81 305.1 252 61.1
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 7.0e-80 301.6 242 60.7
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 1.6e-79 300.4 318 53.1
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 1.9e-77 293.5 275 53.5
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 1.8e-75 287.0 316 49.7
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 3.1e-75 286.2 421 42.5
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 1.2e-74 284.3 353 44.2
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.3e-73 280.8 282 51.8
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.4e-72 277.3 278 54.0
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 3.2e-72 276.2 246 55.7
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 4.6e-71 272.3 243 54.7
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 3.6e-68 262.7 159 76.7
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 2.6e-66 256.5 287 47.4
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.2e-60 237.7 257 49.8
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 4.0e-59 232.6 180 63.9
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 8.9e-59 231.5 261 47.9
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 2.7e-55 219.9 289 43.3
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 3.0e-54 216.5 285 42.5
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 3.6e-52 209.5 283 43.5
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 4.0e-51 206.1 245 42.4
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 3.5e-47 193.0 218 48.6
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 1.0e-46 191.4 134 66.4
Glyma.14G098400 Glycine max HOM05D005491 ORTHO05D006973 2.6e-42 176.8 107 81.3
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 1.7e-41 174.1 200 47.0
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea HOM05D005491 ORTHO05D006973 1.6e-36 157.5 93 80.6
SMO146G0309 Selaginella moellendorffii HOM05D005491 ORTHO05D006973 1.8e-30 137.5 148 45.9
Medtr3g006055 Medicago truncatula HOM05D005491 ORTHO05D006973 7.4e-29 132.1 169 46.2
RcHm_v2.0_Chr3g0481151 Rosa chinensis HOM05D000090 ORTHO05D000083 1.5e-26 124.4 74 74.3
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 2.0e-26 124.0 156 50.0
Medtr4g005800 Medicago truncatula HOM05D005491 ORTHO05D006973 2.6e-26 123.6 97 63.9
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 1.3e-25 121.3 128 53.1
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 4.9e-25 119.4 153 50.3
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 6.5e-25 119.0 107 58.9
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 8.4e-25 118.6 112 61.6
Cpa.g.c36201.2 Carica papaya HOM05D005491 ORTHO05D006973 9.3e-24 115.2 75 70.7
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 1.5e-21 107.8 98 57.1
MCO13G019 Micromonas commoda HOM05D005491 ORTHO05D006973 2.8e-20 103.6 262 29.4
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 5.3e-19 99.4 174 38.5
Cre03.g156600 Chlamydomonas reinhardtii HOM05D005491 ORTHO05D006973 6.9e-19 99.0 240 31.2
SEGI_08052 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 9.0e-19 98.6 86 48.8
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 4.6e-15 86.3 92 56.5
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 5.7e-13 79.3 94 48.9
CBR_g22384 Chara braunii HOM05D005491 ORTHO05D006973 2.2e-12 77.4 184 31.5
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.0e-09 68.6 108 42.6
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.3e-09 68.2 108 41.7
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.3e-09 68.2 53 60.4
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 5.0e-09 66.2 53 56.6
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 6.5e-09 65.9 60 58.3
PRCOL_00005430 Prasinoderma coloniale HOM05D005491 ORTHO05D006973 6.5e-09 65.9 234 26.5
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.9e-08 64.3 53 54.7
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.9e-08 64.3 53 56.6


User provided reference genes

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