Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 4.7e-311 1070.5 568 100.0
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.1e-208 730.3 401 88.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 5.5e-208 728.0 401 88.8
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.3e-184 648.7 399 80.2
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 8.0e-183 644.4 394 79.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.2e-180 636.3 405 76.3
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 1.3e-177 627.1 395 78.2
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 5.0e-177 625.2 405 75.8
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 6.6e-177 624.8 394 77.4
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.9e-172 609.4 367 81.2
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 6.8e-158 561.6 305 88.9
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 9.6e-152 541.2 414 65.0
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.7e-151 538.9 395 65.8
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 9.0e-150 534.6 377 67.6
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.5e-149 533.9 394 64.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 4.4e-149 532.3 404 64.4
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.2e-148 530.0 397 65.0
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.9e-148 529.6 410 64.4
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.8e-148 529.3 410 62.9
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 3.2e-147 526.2 395 64.8
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 4.2e-147 525.8 397 64.7
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 4.2e-147 525.8 394 65.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 4.2e-147 525.8 399 64.4
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.1e-146 523.5 396 65.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 2.7e-146 523.1 379 65.2
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 7.8e-146 521.5 408 64.0
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.7e-145 520.4 379 64.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.7e-145 520.4 374 65.0
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.1e-145 518.8 399 63.7
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 2.1e-143 513.5 380 64.2
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.8e-143 513.1 370 66.2
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.8e-143 513.1 386 64.0
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.4e-142 510.8 378 64.3
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 4.0e-142 509.2 402 62.4
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 9.0e-142 508.1 391 63.4
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.0e-141 506.9 407 62.4
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 5.8e-141 505.4 391 61.9
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.3e-140 504.2 396 62.6
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.8e-140 502.7 380 63.9
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.4e-140 501.5 396 62.1
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.4e-139 500.0 389 62.0
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 4.2e-139 499.2 385 64.4
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 4.2e-139 499.2 368 63.6
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 7.1e-139 498.4 405 59.3
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.2e-138 497.7 383 63.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 2.1e-138 496.9 408 61.0
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 2.1e-138 496.9 408 62.0
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.3e-137 494.2 368 63.6
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.3e-137 494.2 406 59.6
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.8e-137 493.8 385 63.6
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.8e-137 493.8 383 64.0
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 2.3e-137 493.4 385 63.1
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 3.0e-137 493.0 402 58.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.0e-137 493.0 439 56.9
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 8.1e-135 485.0 399 60.9
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 3.1e-134 483.0 381 63.3
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 6.9e-134 481.9 408 60.8
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 3.4e-133 479.6 408 60.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 3.4e-133 479.6 408 60.8
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 9.9e-133 478.0 382 63.9
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.7e-132 477.2 397 60.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.5e-131 473.4 396 57.6
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 2.7e-130 469.9 366 61.7
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 7.9e-130 468.4 378 59.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.3e-129 467.6 445 56.2
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.3e-129 467.6 401 59.4
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.0e-129 466.5 368 61.7
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 6.7e-129 465.3 396 56.8
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.1e-128 464.5 456 54.2
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 1.6e-127 460.7 377 61.5
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.7e-127 459.5 403 56.1
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.4e-126 457.6 378 59.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 6.9e-126 455.3 372 57.8
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.0e-126 454.9 395 57.5
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.6e-122 444.1 331 61.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 7.9e-122 441.8 404 55.9
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.7e-116 424.1 376 57.4
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 6.5e-116 422.2 310 64.8
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 3.2e-115 419.9 433 51.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.6e-114 417.5 292 66.4
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 5.7e-112 409.1 398 52.3
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.7e-111 407.5 374 54.5
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.7e-106 390.2 302 60.6
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.0e-105 386.7 285 62.5
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 8.8e-105 385.2 386 49.7
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 2.9e-100 370.2 283 61.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.4e-94 351.3 306 55.2
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 2.0e-88 330.9 288 60.1
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.9e-83 314.3 231 64.9
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.0e-80 304.3 271 55.4
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.7e-79 300.1 406 41.6
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.7e-77 293.9 243 60.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 5.5e-75 286.2 254 57.9
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.7e-71 274.6 280 52.5
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 5.4e-70 269.6 186 73.7
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.1e-62 245.4 369 36.9
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.4e-62 244.2 214 57.5
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.8e-57 228.0 209 55.5
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.3e-52 211.1 155 63.9
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.9e-46 191.4 378 35.2
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.3e-43 179.5 141 57.4
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 7.1e-38 162.9 100 80.0
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.5e-35 154.5 148 54.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.4e-33 148.7 148 49.3
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.7e-29 134.4 106 64.2
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 2.9e-23 114.4 360 28.6
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 3.8e-23 114.0 88 61.4
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 6.0e-21 106.7 390 29.5
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.9e-21 106.3 74 63.5
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 7.4e-19 99.8 383 26.6
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.8e-17 95.1 381 25.5
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 5.8e-16 90.1 80 51.2
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.1e-14 85.9 74 63.5
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.0e-12 79.3 66 62.1
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 9.6e-11 72.8 64 60.9
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.6e-10 72.0 110 34.5
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.1e-09 69.3 68 48.5
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 6.9e-09 66.6 69 42.0


User provided reference genes

Program Settings