Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 5.2e-235 817.4 426 100.0
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 4.7e-228 794.3 426 97.2
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 1.4e-224 782.7 426 94.6
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 2.4e-224 781.9 426 94.6
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 7.3e-213 743.8 432 89.1
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 6.0e-207 724.2 432 86.8
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 6.6e-206 720.7 441 85.5
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.5e-205 719.5 432 86.3
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 2.8e-204 715.3 432 85.9
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 3.6e-204 714.9 427 86.9
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 6.8e-203 710.7 432 85.4
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 1.5e-197 693.0 425 83.8
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 3.4e-194 681.8 425 82.4
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.1e-192 676.8 433 81.1
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 1.3e-190 669.8 513 72.5
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 7.6e-186 654.1 441 77.1
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 4.9e-185 651.4 430 79.1
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.4e-184 649.8 467 75.2
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 2.1e-183 646.0 436 77.3
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 3.5e-183 645.2 430 78.6
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 1.0e-182 643.7 434 76.5
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 1.3e-182 643.3 440 77.3
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 3.9e-182 641.7 438 76.5
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.9e-181 639.4 431 77.0
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 9.6e-181 637.1 432 77.5
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 9.6e-181 637.1 430 78.1
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 2.8e-180 635.6 435 77.7
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.8e-179 632.9 426 78.4
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 5.3e-179 631.3 437 75.5
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 5.3e-179 631.3 436 75.0
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 1.3e-177 626.7 433 75.5
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 2.9e-177 625.5 429 76.2
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 3.8e-177 625.2 430 77.0
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.2e-176 622.1 436 73.9
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 7.1e-176 620.9 437 74.8
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 9.3e-176 620.5 433 74.8
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.1e-175 619.4 436 73.6
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 3.5e-175 618.6 434 75.6
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 1.8e-174 616.3 438 73.7
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 2.3e-174 615.9 426 75.6
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 6.7e-174 614.4 431 73.3
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 6.7e-174 614.4 429 75.5
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.9e-173 612.8 428 73.8
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 3.3e-173 612.1 437 73.2
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 2.8e-172 609.0 434 72.4
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 3.7e-172 608.6 436 73.2
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.4e-171 605.9 432 73.1
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 5.3e-171 604.7 468 68.4
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 2.6e-170 602.4 483 68.7
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 2.6e-170 602.4 430 75.1
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 7.6e-170 600.9 429 70.4
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 1.0e-169 600.5 418 74.4
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 1.9e-168 596.3 454 69.2
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 2.5e-168 595.9 421 73.6
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 1.8e-166 589.7 437 73.0
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 2.3e-166 589.3 424 74.1
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 2.3e-166 589.3 424 74.1
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 2.3e-166 589.3 424 74.1
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 3.0e-166 589.0 424 74.1
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 3.0e-166 589.0 424 74.1
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 5.1e-166 588.2 426 73.9
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 8.7e-166 587.4 429 72.5
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.1e-165 587.0 420 74.5
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 1.9e-165 586.3 429 72.3
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 1.9e-165 586.3 450 68.7
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 1.9e-165 586.3 416 73.6
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 3.3e-165 585.5 424 72.4
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 4.3e-165 585.1 438 71.7
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 9.7e-165 583.9 440 70.9
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 1.3e-164 583.6 422 73.0
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 2.8e-164 582.4 427 72.8
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 3.7e-164 582.0 445 71.2
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.7e-164 582.0 436 70.2
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 1.4e-163 580.1 426 71.8
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 1.8e-163 579.7 437 70.3
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 1.8e-163 579.7 431 70.8
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 2.4e-163 579.3 426 73.2
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 2.4e-163 579.3 426 72.5
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 5.3e-163 578.2 426 73.0
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 3.4e-162 575.5 419 73.3
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 1.0e-161 573.9 431 70.1
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 2.2e-161 572.8 416 71.9
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 5.0e-161 571.6 427 71.7
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 3.2e-160 568.9 430 69.5
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 4.2e-160 568.5 430 69.1
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 7.2e-160 567.8 385 74.8
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 2.1e-159 566.2 424 71.0
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 3.6e-159 565.5 400 73.0
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 4.6e-159 565.1 427 68.4
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 1.0e-158 563.9 431 66.8
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 1.8e-158 563.1 436 68.6
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 1.3e-156 557.0 419 71.8
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 1.7e-156 556.6 429 67.4
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 4.1e-155 552.0 422 68.7
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 5.3e-155 551.6 419 71.8
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 1.0e-153 547.4 434 67.5
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 1.4e-152 543.5 428 65.2
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 4.2e-152 542.0 422 68.0
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 6.1e-151 538.1 475 62.7
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.0e-150 537.3 452 65.9
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 2.3e-150 536.2 340 82.4
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 2.0e-149 533.1 494 63.8
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 2.0e-149 533.1 438 66.9
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.7e-148 530.0 434 68.4
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 1.1e-147 527.3 385 74.5
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 2.1e-143 513.1 434 64.7
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 2.7e-143 512.7 387 70.3
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 1.1e-141 507.3 419 62.8
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 2.0e-141 506.5 523 55.8
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 2.8e-140 502.7 426 62.4
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 1.4e-139 500.4 428 64.7
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 1.0e-137 494.2 389 69.4
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 1.0e-137 494.2 424 62.5
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 8.0e-135 484.6 422 61.8
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.0e-133 479.9 430 64.2
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.4e-131 473.8 378 69.6
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 7.7e-130 468.0 325 75.4
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 4.7e-127 458.8 370 64.9
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 4.7e-127 458.8 405 60.7
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 2.3e-126 456.4 415 59.3
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.0e-125 453.4 405 60.2
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 9.8e-125 451.1 397 65.2
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 3.1e-123 446.0 429 57.6
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 3.5e-122 442.6 442 53.8
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 3.0e-118 429.5 416 54.8
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.4e-110 404.1 436 53.4
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.5e-106 389.4 361 58.4
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 2.1e-90 337.0 217 79.7
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 2.7e-66 256.9 373 39.9
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 8.7e-57 225.3 418 35.2
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 7.2e-43 179.1 207 50.7
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 1.8e-30 137.9 84 82.1
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 3.6e-18 97.1 55 83.6
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.0e-17 95.5 51 88.2
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 4.0e-17 93.6 46 93.5
arahy.Tifrunner.gnm1.ann1.C7XXCR Arachis hypogaea HOM05D005555 ORTHO05D082991 2.5e-11 74.3 123 45.5


User provided reference genes

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