Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G0423 Vigna mungo HOM05D005684 ORTHO05D007427 5.2e-142 507.7 251 100.0
Phvul.006G040700 Phaseolus vulgaris HOM05D005684 ORTHO05D007427 3.1e-139 498.4 251 98.4
arahy.Tifrunner.gnm1.ann1.A1QMDX Arachis hypogaea HOM05D005684 ORTHO05D007427 9.5e-136 486.9 251 95.2
arahy.Tifrunner.gnm1.ann1.G9AZJ3 Arachis hypogaea HOM05D005684 ORTHO05D007427 9.5e-136 486.9 251 95.2
Glyma.08G314600 Glycine max HOM05D005684 ORTHO05D007427 2.8e-135 485.3 251 95.2
Lj6g0016495 Lotus japonicus HOM05D005684 ORTHO05D007427 1.4e-134 483.0 251 94.4
Glyma.18G099600 Glycine max HOM05D005684 ORTHO05D007427 1.8e-134 482.6 251 94.4
TPR.G16583 Trifolium pratense HOM05D005684 ORTHO05D007427 1.8e-134 482.6 250 94.4
Lalb_Chr06g0171921 Lupinus albus HOM05D005684 ORTHO05D007427 3.0e-134 481.9 251 94.8
Medtr3g051210 Medicago truncatula HOM05D005684 ORTHO05D007427 2.6e-133 478.8 250 93.6
Ca_14720_v3 Cicer arietinum L. HOM05D005684 ORTHO05D007427 3.4e-133 478.4 250 93.6
Medtr7g033650 Medicago truncatula HOM05D005684 ORTHO05D007427 1.2e-130 469.9 250 92.4
CANSAT21G0158 Cannabis sativa HOM05D005684 ORTHO05D007427 3.5e-130 468.4 249 90.8
TWI38G0783 Tripterygium wilfordii HOM05D005684 ORTHO05D007427 3.5e-130 468.4 251 90.4
CiPaw.12G128600 Carya illinoinensis HOM05D005684 ORTHO05D007427 5.9e-130 467.6 247 92.3
Potri.001G424600 Populus trichocarpa HOM05D005684 ORTHO05D007427 1.7e-129 466.1 249 91.2
Cpa.g.sc97.28 Carica papaya HOM05D005684 ORTHO05D007427 5.0e-129 464.5 251 90.4
ClCG10G005500 Citrullus lanatus HOM05D005684 ORTHO05D007427 1.5e-128 463.0 251 89.2
Manes.03G124800 Manihot esculenta HOM05D005684 ORTHO05D007427 2.5e-128 462.2 249 89.6
CsaV3_3G005220 Cucumis sativus L. HOM05D005684 ORTHO05D007427 5.6e-128 461.1 251 88.8
FvH4_3g22390 Fragaria vesca HOM05D005684 ORTHO05D007427 5.6e-128 461.1 251 89.6
FAN21G0196 Fragaria x ananassa HOM05D005684 ORTHO05D007427 1.6e-127 459.5 251 89.2
Lj1A870G92 Lonicera japonica HOM05D005684 ORTHO05D007427 2.1e-127 459.1 250 90.4
Dinv22273 Davidia involucrata HOM05D005684 ORTHO05D007427 2.8e-127 458.8 250 89.6
RcHm_v2.0_Chr5g0039061 Rosa chinensis HOM05D005684 ORTHO05D007427 2.8e-127 458.8 251 89.2
Actinidia35335 Actinidia chinensis HOM05D005684 ORTHO05D007427 6.1e-127 457.6 250 89.6
Manes.15G073300 Manihot esculenta HOM05D005684 ORTHO05D007427 6.1e-127 457.6 249 88.8
Actinidia10725 Actinidia chinensis HOM05D005684 ORTHO05D007427 8.0e-127 457.2 250 89.6
MD03G1205400 Malus domestica HOM05D005684 ORTHO05D007427 1.0e-126 456.8 251 89.2
Sc16g0006290 Simmondsia chinensis HOM05D005684 ORTHO05D007427 1.0e-126 456.8 250 89.6
MSTRG.12968 Avicennia marina HOM05D005684 ORTHO05D007427 1.4e-126 456.4 250 88.4
Ciclev10009283m.g Citrus clementina HOM05D005684 ORTHO05D007427 1.8e-126 456.1 251 88.4
Eucgr.F03458 Eucalyptus grandis HOM05D005684 ORTHO05D007427 1.8e-126 456.1 251 89.6
PGR031G1629 Punica granatum HOM05D005684 ORTHO05D007427 2.3e-126 455.7 251 88.8
Sed0015085 Sechium edule HOM05D005684 ORTHO05D007427 5.2e-126 454.5 251 87.6
FAN11G1729 Fragaria x ananassa HOM05D005684 ORTHO05D007427 8.9e-126 453.8 259 86.9
QL09p032912 Quercus lobata HOM05D005684 ORTHO05D007427 1.5e-125 453.0 248 90.7
GSVIVG01037615001 Vitis vinifera HOM05D005684 ORTHO05D007427 1.5e-125 453.0 244 91.0
Cc05_g13580 Coffea canephora HOM05D005684 ORTHO05D007427 2.0e-125 452.6 250 88.8
MD11G1221300 Malus domestica HOM05D005684 ORTHO05D007427 2.0e-125 452.6 249 88.8
ECA236G3763 Erigeron canadensis HOM05D005684 ORTHO05D007427 2.6e-125 452.2 250 88.0
QL08p011467 Quercus lobata HOM05D005684 ORTHO05D007427 3.4e-125 451.8 248 91.1
Lsat_1_v5_gn_7_109480 Lactuca sativa HOM05D005684 ORTHO05D007427 5.8e-125 451.1 244 89.8
Peaxi162Scf00387g00210 Petunia axillaris HOM05D005684 ORTHO05D007427 9.8e-125 450.3 250 86.8
QL08p011589 Quercus lobata HOM05D005684 ORTHO05D007427 9.8e-125 450.3 248 90.7
THA.LOC104817661 Tarenaya hassleriana HOM05D005684 ORTHO05D007427 1.3e-124 449.9 251 85.7
Nitab4.5_0005048g0050 Nicotiana tabacum HOM05D005684 ORTHO05D007427 1.7e-124 449.5 250 86.4
Sopen10g002270 Solanum pennellii HOM05D005684 ORTHO05D007427 1.7e-124 449.5 250 86.4
HanXRQChr11g0336331 Helianthus annuus HOM05D005684 ORTHO05D007427 2.2e-124 449.1 250 87.6
Aqoxy7G03212 Aquilegia oxysepala HOM05D005684 ORTHO05D007427 2.9e-124 448.7 240 90.8
Migut.H01837 Erythranthe guttata HOM05D005684 ORTHO05D007427 2.9e-124 448.7 250 87.2
Solyc10g006320.3 Solanum lycopersicum HOM05D005684 ORTHO05D007427 4.9e-124 448.0 250 86.0
PGSC0003DMG400014423 Solanum tuberosum HOM05D005684 ORTHO05D007427 6.4e-124 447.6 250 86.0
ATR0749G094 Amborella trichopoda HOM05D005684 ORTHO05D007427 1.1e-123 446.8 249 87.1
Gohir.D01G065700 Gossypium hirsutum HOM05D005684 ORTHO05D007427 2.4e-123 445.7 244 89.3
Gorai.002G087600 Gossypium raimondii HOM05D005684 ORTHO05D007427 2.4e-123 445.7 244 89.3
Thhalv10014489m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 3.2e-123 445.3 251 84.1
TAR383G0098 Trochodendron aralioides HOM05D005684 ORTHO05D007427 4.1e-123 444.9 250 87.6
Gohir.A01G078600 Gossypium hirsutum HOM05D005684 ORTHO05D007427 7.0e-123 444.1 244 88.9
PSO170G3986 Papaver somniferum HOM05D005684 ORTHO05D007427 3.5e-122 441.8 245 89.0
Carub.0007s1380 Capsella rubella HOM05D005684 ORTHO05D007427 1.7e-121 439.5 249 83.1
PSO017G1132 Papaver somniferum HOM05D005684 ORTHO05D007427 2.3e-121 439.1 245 88.2
vmacro09729 Vaccinium macrocarpon HOM05D005684 ORTHO05D007427 3.0e-121 438.7 264 83.7
Cfa020373 Carpinus fangiana HOM05D005684 ORTHO05D007427 5.0e-121 438.0 231 91.3
Sabra16G0288400 Salix brachista HOM05D005684 ORTHO05D007427 6.6e-121 437.6 296 76.7
Duzib170G0103 Durio zibethinus HOM05D005684 ORTHO05D007427 8.6e-121 437.2 244 87.7
AL7G25790 Arabidopsis lyrata HOM05D005684 ORTHO05D007427 1.1e-120 436.8 251 82.1
AT4G27040 Arabidopsis thaliana HOM05D005684 ORTHO05D007427 1.1e-120 436.8 251 82.1
MBI15_g26086_MAGBIO Magnolia biondii HOM05D005684 ORTHO05D007427 1.9e-120 436.0 251 86.9
CARHR234690 Cardamine hirsuta HOM05D005684 ORTHO05D007427 4.3e-120 434.9 251 82.1
SGA_v2.0_scaffold9G05066 Striga asiatica HOM05D005684 ORTHO05D007427 9.5e-120 433.7 269 81.8
Nn8g40268 Nelumbo nucifera HOM05D005684 ORTHO05D007427 1.2e-119 433.3 250 83.6
Aa31LG3G10790 Aethionema arabicum HOM05D005684 ORTHO05D007427 2.1e-119 432.6 256 81.6
Thhalv10026070m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 2.8e-119 432.2 251 81.7
Sp7g25020 Schrenkiella parvula HOM05D005684 ORTHO05D007427 8.0e-119 430.6 251 82.1
BcaC06g32714 Brassica carinata HOM05D005684 ORTHO05D007427 1.1e-118 430.3 251 81.7
BolC7t46008H Brassica oleracea HOM05D005684 ORTHO05D007427 1.1e-118 430.3 251 81.7
COL.COLO4_09643 Corchorus olitorius HOM05D005684 ORTHO05D007427 1.1e-118 430.3 244 87.3
RhsimUnG0251500 Rhododendron simsii HOM05D001404 ORTHO05D002309 1.4e-118 429.9 233 91.0
A03p57030 Brassica napus HOM05D005684 ORTHO05D007427 1.8e-118 429.5 251 81.7
C07p55040 Brassica napus HOM05D005684 ORTHO05D007427 1.8e-118 429.5 251 81.7
BraA03t14772Z Brassica rapa HOM05D005684 ORTHO05D007427 3.1e-118 428.7 251 81.3
A01p18200 Brassica napus HOM05D005684 ORTHO05D007427 6.8e-118 427.6 251 81.3
BraA01t01775Z Brassica rapa HOM05D005684 ORTHO05D007427 6.8e-118 427.6 251 81.3
Haze_09656 Corylus avellana HOM05D005684 ORTHO05D007427 1.2e-117 426.8 247 86.2
Aa31LG5G10350 Aethionema arabicum HOM05D005684 ORTHO05D007427 1.3e-116 423.3 298 70.5
BcaC09g50622 Brassica carinata HOM05D005684 ORTHO05D007427 1.7e-116 422.9 251 80.9
SEGI_16862 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 2.4e-115 419.1 247 81.8
Os09g0529700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 3.2e-115 418.7 250 81.2
CAN.G1781.5 Capsicum annuum HOM05D005684 ORTHO05D007427 4.1e-115 418.3 233 85.4
Os11g0670700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 8.6e-113 410.6 250 79.6
Nitab4.5_0001393g0150 Nicotiana tabacum HOM05D005684 ORTHO05D007427 1.5e-112 409.8 250 80.4
Oeu062595.4 Olea europaea HOM05D005684 ORTHO05D007427 2.0e-109 399.4 355 60.8
SMO232G0102 Selaginella moellendorffii HOM05D005684 ORTHO05D007427 1.1e-107 393.7 247 75.3
Hma1.2p1_0673F.1_g201210 Hydrangea macrophylla HOM05D005684 ORTHO05D007427 2.4e-107 392.5 255 78.8
BolC1t02253H Brassica oleracea HOM05D005684 ORTHO05D007427 5.6e-104 381.3 223 80.3
CDE08G1370 Ceratophyllum demersum HOM05D005684 ORTHO05D007427 9.6e-104 380.6 243 77.0
Mapoly0007s0150 Marchantia polymorpha HOM05D005684 ORTHO05D007427 6.2e-103 377.9 242 73.1
HPP92_001822 Vanilla planifolia HOM05D005684 ORTHO05D007427 6.2e-103 377.9 212 86.8
Prupe.4G210400 Prunus persica HOM05D005684 ORTHO05D007427 2.6e-101 372.5 251 75.7
Pp3c10_13560 Physcomitrium patens HOM05D005684 ORTHO05D007427 4.4e-101 371.7 246 74.4
AUR62020473 Chenopodium quinoa HOM05D005684 ORTHO05D007427 3.5e-98 362.1 250 72.8
BolC1t02251H Brassica oleracea HOM05D005684 ORTHO05D007427 4.3e-96 355.1 238 73.1
Psat5g180640 Pisum sativum HOM05D005684 ORTHO05D007427 6.9e-94 347.8 181 92.3
EL10Ac4g07848 Beta vulgaris HOM05D005684 ORTHO05D007427 2.0e-93 346.3 250 71.6
CBR_g28043 Chara braunii HOM05D005684 ORTHO05D007427 1.7e-92 343.2 250 66.8
FAN16G3416 Fragaria x ananassa HOM05D005684 ORTHO05D007427 2.2e-92 342.8 194 88.7
SEGI_13452 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 3.5e-90 335.5 206 81.1
AUR62015738 Chenopodium quinoa HOM05D005684 ORTHO05D007427 8.4e-84 314.3 324 54.6
Zm00001eb103240 Zea mays HOM05D005684 ORTHO05D007427 1.9e-83 313.2 187 83.4
Ah.06g186400 Amaranthus hybridus HOM05D005684 ORTHO05D007427 5.5e-75 285.0 208 69.7
MELO3C032233.2 Cucumis melo HOM05D005684 ORTHO05D007427 3.9e-73 278.9 151 90.1
C01p23200 Brassica napus HOM05D005684 ORTHO05D007427 1.3e-71 273.9 185 71.4
Cre17.g706650 Chlamydomonas reinhardtii HOM05D005684 ORTHO05D007427 2.1e-71 273.1 245 53.1
MCO16G427 Micromonas commoda HOM05D005684 ORTHO05D007427 3.8e-68 262.3 254 51.6
Duzib213G0140 Durio zibethinus HOM05D005684 ORTHO05D007427 2.1e-66 256.5 211 66.4
AagrBONN_evm.TU.Sc2ySwM_228.646 Anthoceros agrestis HOM05D005684 ORTHO05D007427 8.2e-63 244.6 152 77.0
CAN.G915.10 Capsicum annuum HOM05D005684 ORTHO05D007427 2.0e-61 240.0 194 63.9
Thecc.07G042900 Theobroma cacao HOM05D005684 ORTHO05D007427 7.9e-58 228.0 244 54.1
TAR626G1586 Trochodendron aralioides HOM05D005684 ORTHO05D007427 1.2e-53 214.2 122 85.2
GSVIVG01037619001 Vitis vinifera HOM05D005684 ORTHO05D007427 6.7e-49 198.4 113 84.1
TAR626G0395 Trochodendron aralioides HOM05D005684 ORTHO05D007427 2.0e-48 196.8 99 96.0
MELO3C031910.2 Cucumis melo HOM05D005684 ORTHO05D007427 6.3e-47 191.8 101 89.1
PRCOL_00005955 Prasinoderma coloniale HOM05D005684 ORTHO05D007427 7.0e-46 188.3 249 44.6
PGR142G1953 Punica granatum HOM05D005684 ORTHO05D007427 2.9e-44 183.0 101 84.2
Cfa026637 Carpinus fangiana HOM05D005684 ORTHO05D007427 1.1e-40 171.0 257 35.4
Dinv40739 Davidia involucrata HOM05D005684 ORTHO05D007427 1.4e-38 164.1 158 61.4
Prupe.5G052500 Prunus persica HOM05D005684 ORTHO05D007427 1.8e-38 163.7 100 80.0
C01p23160 Brassica napus HOM05D005684 ORTHO05D007427 3.1e-38 162.9 116 68.1
CAN.G1192.5 Capsicum annuum HOM05D005684 ORTHO05D000076 1.0e-28 131.3 124 59.7
HanXRQChr09g0268041 Helianthus annuus HOM05D005684 ORTHO05D007427 2.8e-18 96.7 101 51.5
SEGI_35638 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 8.0e-18 95.1 64 65.6
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 3.0e-17 93.2 137 46.7
Hma1.2p1_0212F.1_g090110 Hydrangea macrophylla HOM05D005684 ORTHO05D048316 5.4e-14 82.4 44 81.8
AagrBONN_evm.TU.Sc2ySwM_340.2023 Anthoceros agrestis HOM05D005684 ORTHO05D007427 2.7e-13 80.1 55 70.9
SEGI_36060 Sequoiadendron giganteum HOM05D005684 ORTHO05D383802 8.6e-12 75.1 56 67.9
GSVIVG01037618001 Vitis vinifera HOM05D005684 ORTHO05D048316 6.8e-09 65.5 30 93.3
Zm00001eb057030 Zea mays HOM05D000424 ORTHO05D000355 3.4e-08 63.2 55 63.6


User provided reference genes

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