Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G0175 Vigna mungo HOM05D002285 ORTHO05D004192 6.0e-47 191.0 141 100.0
VMungo0540G1611 Vigna mungo HOM05D002285 ORTHO05D004192 2.6e-13 79.3 118 75.4
Phvul.006G217200 Phaseolus vulgaris HOM05D002285 ORTHO05D004192 2.2e-12 76.3 118 73.7
Glyma.08G188900 Glycine max HOM05D002285 ORTHO05D004192 6.3e-12 74.7 118 72.9
Glyma.12G168800 Glycine max HOM05D002285 ORTHO05D004192 8.2e-12 74.3 118 72.9
Lj6g0002670 Lotus japonicus HOM05D002285 ORTHO05D004192 3.1e-11 72.4 124 64.5
FAN15G0402 Fragaria x ananassa HOM05D002285 ORTHO05D004192 9.1e-11 70.9 119 68.9
FAN24G1949 Fragaria x ananassa HOM05D002285 ORTHO05D004192 9.1e-11 70.9 119 68.9
RcHm_v2.0_Chr6g0282661 Rosa chinensis HOM05D002285 ORTHO05D004192 1.2e-10 70.5 119 64.7
MELO3C019433.2 Cucumis melo HOM05D002285 ORTHO05D004192 1.6e-10 70.1 118 68.6
Sed0020539 Sechium edule HOM05D002285 ORTHO05D004192 1.6e-10 70.1 119 68.9
COL.COLO4_32862 Corchorus olitorius HOM05D002285 ORTHO05D004192 2.0e-10 69.7 119 68.1
Psat7g025360 Pisum sativum HOM05D002285 ORTHO05D004192 2.0e-10 69.7 124 63.7
Manes.15G172900 Manihot esculenta HOM05D002285 ORTHO05D004192 2.6e-10 69.3 119 63.9
Prupe.8G189400 Prunus persica HOM05D002285 ORTHO05D004192 3.5e-10 68.9 119 57.1
THA.LOC104826826 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 3.5e-10 68.9 119 68.1
CSS0011301 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 4.5e-10 68.6 119 67.2
CSS0018531 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 4.5e-10 68.6 119 66.4
ClCG05G009460 Citrullus lanatus HOM05D002285 ORTHO05D004192 4.5e-10 68.6 118 70.3
CsaV3_3G019250 Cucumis sativus L. HOM05D002285 ORTHO05D004192 4.5e-10 68.6 118 68.6
Eucgr.G03185 Eucalyptus grandis HOM05D002285 ORTHO05D004192 4.5e-10 68.6 119 63.9
FvH4_2g17680 Fragaria vesca HOM05D002285 ORTHO05D004192 4.5e-10 68.6 119 68.1
Haze_01812 Corylus avellana HOM05D002285 ORTHO05D004192 5.9e-10 68.2 118 69.5
MD10G1150700 Malus domestica HOM05D002285 ORTHO05D004192 7.7e-10 67.8 119 64.7
Medtr3g113680 Medicago truncatula HOM05D002285 ORTHO05D004192 1.0e-09 67.4 119 68.1
Medtr7g109430 Medicago truncatula HOM05D002285 ORTHO05D004192 1.0e-09 67.4 119 68.1
THA.LOC104816587 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 1.0e-09 67.4 119 65.5
Duzib114G1054 Durio zibethinus HOM05D002285 ORTHO05D004192 1.7e-09 66.6 119 67.2
Potri.003G190000 Populus trichocarpa HOM05D002285 ORTHO05D004192 1.7e-09 66.6 120 64.2
arahy.Tifrunner.gnm1.ann1.2HCW1A Arachis hypogaea HOM05D002285 ORTHO05D004192 2.2e-09 66.2 118 68.6
arahy.Tifrunner.gnm1.ann1.IXY6UZ Arachis hypogaea HOM05D002285 ORTHO05D004192 2.2e-09 66.2 118 68.6
CiPaw.05G050700 Carya illinoinensis HOM05D002285 ORTHO05D004192 2.2e-09 66.2 119 52.9
Gohir.D06G181100 Gossypium hirsutum HOM05D002285 ORTHO05D004192 2.2e-09 66.2 119 67.2
Gohir.D06G181300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 2.2e-09 66.2 119 67.2
Gorai.010G212600 Gossypium raimondii HOM05D002285 ORTHO05D004192 2.2e-09 66.2 119 67.2
Gorai.010G212800 Gossypium raimondii HOM05D002285 ORTHO05D004192 2.2e-09 66.2 119 67.2
SGA_v2.0_scaffold19G08809 Striga asiatica HOM05D002285 ORTHO05D004192 2.2e-09 66.2 118 69.5
Ca_15481_v3 Cicer arietinum L. HOM05D002285 ORTHO05D004192 2.9e-09 65.9 118 66.9
Lalb_Chr20g0123651 Lupinus albus HOM05D002285 ORTHO05D004192 2.9e-09 65.9 124 54.0
CiPaw.06G144200 Carya illinoinensis HOM05D002285 ORTHO05D004192 3.8e-09 65.5 119 68.1
Ciclev10011261m.g Citrus clementina HOM05D002285 ORTHO05D004192 3.8e-09 65.5 118 55.1
Duzib128G0133 Durio zibethinus HOM05D002285 ORTHO05D004192 3.8e-09 65.5 119 63.9
Sp6g36800 Schrenkiella parvula HOM05D002285 ORTHO05D004192 3.8e-09 65.5 126 61.9
Sed0011384 Sechium edule HOM05D002285 ORTHO05D004192 3.8e-09 65.5 114 71.1
Thecc.10G132200 Theobroma cacao HOM05D002285 ORTHO05D004192 3.8e-09 65.5 119 64.7
MSTRG.11320 Avicennia marina HOM05D002285 ORTHO05D004192 6.5e-09 64.7 118 56.8
DCAR_029722 Daucus carota HOM05D002285 ORTHO05D004192 8.5e-09 64.3 124 53.2
Dinv04986 Davidia involucrata HOM05D002285 ORTHO05D004192 8.5e-09 64.3 119 66.4
Thhalv10012905m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 8.5e-09 64.3 126 63.5
TWI75G0169 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 1.1e-08 63.9 118 66.9
Gohir.A06G172500 Gossypium hirsutum HOM05D002285 ORTHO05D004192 1.5e-08 63.5 119 65.5
Potri.001G035800 Populus trichocarpa HOM05D002285 ORTHO05D004192 1.5e-08 63.5 119 63.0
Aqoxy2G00069 Aquilegia oxysepala HOM05D002285 ORTHO05D004192 1.9e-08 63.2 131 59.5
Gohir.A06G172300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 1.9e-08 63.2 119 66.4
Lj9P652T21 Lonicera japonica HOM05D002285 ORTHO05D004192 1.9e-08 63.2 117 65.0
unitig_8.g3024 Utricularia gibba HOM05D002285 ORTHO05D004192 1.9e-08 63.2 115 53.0
CARHR086000 Cardamine hirsuta HOM05D002285 ORTHO05D004192 2.5e-08 62.8 127 62.2
QL06p001430 Quercus lobata HOM05D002285 ORTHO05D004192 3.2e-08 62.4 118 66.1
Thhalv10020260m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 4.2e-08 62.0 127 62.2
TWI12G1303 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 4.2e-08 62.0 118 66.9
Atru.chr8.2275 Acer truncatum HOM05D002285 ORTHO05D004192 5.5e-08 61.6 119 62.2
AT3G11450 Arabidopsis thaliana HOM05D002285 ORTHO05D004192 5.5e-08 61.6 127 62.2
Lsat_1_v5_gn_6_76300 Lactuca sativa HOM05D002285 ORTHO05D004192 7.2e-08 61.2 118 58.5
PGR031G2891 Punica granatum HOM05D002285 ORTHO05D004192 7.2e-08 61.2 119 63.0
BcaC05g29373 Brassica carinata HOM05D002285 ORTHO05D004192 9.4e-08 60.8 127 59.8
C05p56680 Brassica napus HOM05D002285 ORTHO05D004192 9.4e-08 60.8 127 59.8
BolC5t34333H Brassica oleracea HOM05D002285 ORTHO05D004192 9.4e-08 60.8 127 59.8
Lalb_Chr15g0090711 Lupinus albus HOM05D002285 ORTHO05D004192 9.4e-08 60.8 118 67.8
Sabra01G0024900 Salix brachista HOM05D002285 ORTHO05D004192 9.4e-08 60.8 119 62.2
unitig_22.g6247 Utricularia gibba HOM05D002285 ORTHO05D004192 1.2e-07 60.5 115 60.0
Lsat_1_v5_gn_3_22761 Lactuca sativa HOM05D002285 ORTHO05D004192 1.6e-07 60.1 118 58.5
Sp3g09680 Schrenkiella parvula HOM05D002285 ORTHO05D004192 1.6e-07 60.1 127 59.8
Carub.0003s1077 Capsella rubella HOM05D002285 ORTHO05D004192 2.1e-07 59.7 127 61.4
Sabra03G0139800 Salix brachista HOM05D002285 ORTHO05D004192 2.7e-07 59.3 120 56.7
AL3G22990 Arabidopsis lyrata HOM05D002285 ORTHO05D004192 3.6e-07 58.9 127 61.4
A05p37890 Brassica napus HOM05D002285 ORTHO05D004192 3.6e-07 58.9 127 59.1
BraA05t22583Z Brassica rapa HOM05D002285 ORTHO05D004192 3.6e-07 58.9 127 59.1
Nitab4.5_0007610g0020 Nicotiana tabacum HOM05D002285 ORTHO05D004192 3.6e-07 58.9 118 50.8
Rhsim04G0038900 Rhododendron simsii HOM05D002285 ORTHO05D004192 3.6e-07 58.9 119 64.7
Sabra17G0000200 Salix brachista HOM05D000075 ORTHO05D000073 3.6e-07 58.9 33 84.8
Sc09g0004710 Simmondsia chinensis HOM05D002285 ORTHO05D004192 3.6e-07 58.9 33 81.8
BcaB06g25623 Brassica carinata HOM05D002285 ORTHO05D004192 4.7e-07 58.5 127 59.1
CARHR206810 Cardamine hirsuta HOM05D002285 ORTHO05D004192 4.7e-07 58.5 123 62.6
Migut.I00387 Erythranthe guttata HOM05D002285 ORTHO05D004192 4.7e-07 58.5 115 56.5
Nitab4.5_0004168g0010 Nicotiana tabacum HOM05D002285 ORTHO05D004192 4.7e-07 58.5 118 50.8
SGA_v2.0_scaffold25G10982 Striga asiatica HOM05D002285 ORTHO05D004192 4.7e-07 58.5 118 65.3
BcaB04g21135 Brassica carinata HOM05D002285 ORTHO05D004192 6.1e-07 58.2 127 59.8
Sopen01g040410 Solanum pennellii HOM05D002285 ORTHO05D004192 6.1e-07 58.2 118 50.0
PGSC0003DMG400003295 Solanum tuberosum HOM05D002285 ORTHO05D004192 6.1e-07 58.2 118 53.4
EL10Ac1g01198 Beta vulgaris HOM05D002285 ORTHO05D004192 8.0e-07 57.8 33 78.8
EL10Ac1g01199 Beta vulgaris HOM05D002285 ORTHO05D004192 8.0e-07 57.8 33 78.8
CAN.G134.32 Capsicum annuum HOM05D002285 ORTHO05D004192 8.0e-07 57.8 118 61.0
Ah.09g228410 Amaranthus hybridus HOM05D002285 ORTHO05D004192 1.0e-06 57.4 33 78.8
SEGI_05673 Sequoiadendron giganteum HOM05D002285 ORTHO05D004192 1.0e-06 57.4 41 68.3
TAR629G0600 Trochodendron aralioides HOM05D002285 ORTHO05D004192 1.0e-06 57.4 119 53.8
CDE08G0904 Ceratophyllum demersum HOM05D002285 ORTHO05D004192 1.4e-06 57.0 33 81.8
HanXRQChr03g0084781 Helianthus annuus HOM05D002285 ORTHO05D004192 1.4e-06 57.0 33 81.8
HanXRQChr17g0536391 Helianthus annuus HOM05D002285 ORTHO05D004192 1.4e-06 57.0 119 58.0
MD05G1158000 Malus domestica HOM05D002285 ORTHO05D004192 1.4e-06 57.0 33 81.8
TAR629G0471 Trochodendron aralioides HOM05D002285 ORTHO05D004192 1.4e-06 57.0 118 53.4
ECA246G3634 Erigeron canadensis HOM05D002285 ORTHO05D004192 1.8e-06 56.6 119 57.1
Ah.14g085290 Amaranthus hybridus HOM05D002285 ORTHO05D004192 4.0e-06 55.5 33 75.8
HanXRQChr07g0198621 Helianthus annuus HOM05D002285 ORTHO05D004192 4.0e-06 55.5 33 78.8
Cc07_g11350 Coffea canephora HOM05D002285 ORTHO05D004192 5.2e-06 55.1 33 81.8
SHI11339 Sapria himalayana HOM05D002285 ORTHO05D004192 5.2e-06 55.1 117 61.5
vmacro09396 Vaccinium macrocarpon HOM05D002285 ORTHO05D004192 6.7e-06 54.7 119 63.0
Aa31LG3G4810 Aethionema arabicum HOM05D002285 ORTHO05D004192 8.8e-06 54.3 127 59.1
CANSAT01G1933 Cannabis sativa HOM05D002285 ORTHO05D004192 8.8e-06 54.3 118 59.3
Peaxi162Scf00220g00025 Petunia axillaris HOM05D002285 ORTHO05D004192 8.8e-06 54.3 119 61.3


User provided reference genes

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