Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 0.0e+00 1099.3 551 100.0
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 5.4e-269 930.6 487 95.3
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.6e-249 865.9 488 88.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.5e-247 859.4 489 87.9
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 6.1e-228 794.3 491 81.3
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 7.9e-228 793.9 484 83.7
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 2.6e-226 788.9 484 83.1
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 2.6e-226 788.9 491 81.1
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 3.2e-221 771.9 493 79.5
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 4.2e-221 771.5 494 78.5
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 4.2e-221 771.5 494 79.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 4.7e-212 741.5 492 77.2
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 9.2e-200 700.7 452 77.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.7e-199 699.1 452 77.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.5e-199 698.7 452 77.2
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.0e-198 697.2 452 76.8
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 1.7e-198 696.4 452 76.8
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.9e-198 695.7 428 79.4
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 5.6e-197 691.4 487 71.5
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 3.6e-196 688.7 452 76.3
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.0e-195 687.2 446 76.9
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 2.3e-195 686.0 428 78.7
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.0e-195 685.6 486 70.0
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 2.9e-193 679.1 446 76.0
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.2e-192 675.6 443 75.4
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.1e-192 675.2 498 70.5
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 7.0e-192 674.5 487 70.0
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.6e-191 673.3 481 69.9
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.7e-191 672.5 481 70.7
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 5.9e-191 671.4 415 79.0
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 7.8e-191 671.0 443 75.4
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 6.6e-190 667.9 472 71.6
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 8.6e-190 667.5 481 69.6
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.1e-189 667.2 488 68.0
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.1e-189 667.2 505 67.5
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 4.3e-189 665.2 484 69.4
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 1.6e-188 663.3 520 68.1
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.6e-188 662.1 442 73.8
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 6.2e-188 661.4 492 70.1
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.0e-187 660.6 492 68.7
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 8.9e-187 657.5 474 70.0
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.0e-186 656.4 497 68.2
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.6e-186 656.0 487 68.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 4.4e-186 655.2 413 78.0
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.3e-185 653.7 486 67.3
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.7e-185 653.3 432 75.5
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 3.7e-185 652.1 481 68.6
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.1e-184 650.6 487 68.2
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.4e-184 650.2 483 68.3
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 3.9e-182 642.1 482 66.6
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 8.6e-182 641.0 491 67.4
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.9e-181 639.8 415 75.7
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.2e-180 637.1 441 71.7
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 6.2e-180 634.8 484 66.7
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 5.2e-179 631.7 482 67.6
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 8.9e-179 630.9 432 72.7
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.4e-178 629.0 436 70.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.1e-176 624.0 435 70.8
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.1e-176 624.0 445 70.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 3.2e-176 622.5 426 73.9
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 4.6e-175 618.6 435 70.6
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 5.6e-173 611.7 413 70.5
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 5.6e-173 611.7 488 64.3
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.2e-172 610.5 418 70.8
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 2.1e-172 609.8 424 71.2
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.1e-171 607.4 421 70.3
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.3e-171 606.3 485 63.9
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.9e-168 596.7 486 63.8
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 5.1e-166 588.6 419 69.5
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 4.3e-165 585.5 422 68.2
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 9.6e-165 584.3 415 69.6
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.4e-163 580.5 422 67.5
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.3e-161 573.9 422 67.3
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.7e-161 573.5 422 67.3
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.2e-161 573.2 422 66.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.8e-161 572.4 493 60.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 9.3e-160 567.8 428 65.9
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 2.1e-159 566.6 499 58.3
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 3.5e-159 565.8 496 60.3
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 3.0e-158 562.8 433 65.1
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.5e-157 560.5 485 60.8
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 7.3e-157 558.1 434 63.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 9.6e-157 557.8 495 59.0
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.8e-156 555.4 416 65.6
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 6.2e-156 555.1 434 62.9
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 8.1e-156 554.7 431 62.9
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.4e-155 553.9 495 57.2
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 3.1e-155 552.7 434 62.7
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 6.9e-155 551.6 432 62.7
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 6.9e-155 551.6 430 63.0
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 7.9e-151 538.1 416 63.2
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 5.6e-149 531.9 426 65.5
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.8e-148 529.6 421 62.2
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 4.2e-144 515.8 373 68.9
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 8.2e-140 501.5 329 72.9
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 6.9e-131 471.9 392 58.2
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 2.2e-129 466.8 400 58.0
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.2e-129 466.8 432 55.6
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 5.5e-128 462.2 459 55.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.7e-125 452.2 290 76.2
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 2.7e-111 406.8 373 56.0
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.6e-103 380.9 393 46.1
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 5.2e-94 349.4 233 73.4
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.6e-85 320.5 324 55.2
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 2.3e-81 307.4 445 38.4
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.8e-81 306.6 205 72.2
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.7e-76 291.2 197 74.1
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 2.9e-68 263.8 150 83.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.4e-62 245.0 298 42.6
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 3.7e-60 236.9 134 83.6
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 7.3e-56 222.6 386 32.9
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 6.0e-50 203.0 171 60.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.0e-38 163.7 261 41.4
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 5.4e-35 153.3 125 60.8
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.1e-34 151.4 199 40.7
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.7e-34 151.0 135 58.5
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 7.9e-26 122.9 204 40.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 5.6e-24 116.7 208 39.4
VMungo0331G0478 Vigna mungo HOM05D008589 ORTHO05D010715 9.0e-22 109.4 77 76.6
VMungo1383G0508 Vigna mungo HOM05D008589 ORTHO05D010715 6.5e-20 103.2 60 88.3
VMungo1383G3392 Vigna mungo HOM05D000402 ORTHO05D000263 1.1e-19 102.4 57 86.0
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 3.7e-15 87.4 143 36.4
VMungo0331G0233 Vigna mungo HOM05D007793 ORTHO05D010104 1.1e-14 85.9 49 89.8
VMungo1215G1186 Vigna mungo HOM05D000262 ORTHO05D000300 1.8e-14 85.1 51 86.3
VMungo1383G0938 Vigna mungo HOM05D008589 ORTHO05D010715 4.1e-14 84.0 50 86.0
VMungo0409G0001 Vigna mungo HOM05D008589 ORTHO05D010715 5.3e-14 83.6 53 81.1
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 5.3e-14 83.6 50 84.0
VMungo1215G0345 Vigna mungo HOM05D008589 ORTHO05D010715 9.0e-14 82.8 50 84.0
VMungo0251G0286 Vigna mungo HOM05D008589 ORTHO05D010715 1.5e-13 82.0 53 79.2
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 1.5e-13 82.0 71 64.8
VMungo0647G0477 Vigna mungo HOM05D008589 ORTHO05D010715 4.5e-13 80.5 67 67.2
VMungo1215G1282 Vigna mungo HOM05D008589 ORTHO05D010715 1.1e-11 75.9 53 77.4
VMungo0251G2198 Vigna mungo HOM05D008589 ORTHO05D010715 1.4e-11 75.5 52 76.9
VMungo0647G2079 Vigna mungo HOM05D008589 ORTHO05D010715 1.2e-10 72.4 35 94.3


User provided reference genes

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