Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 3.1e-195 684.9 332 100.0
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.2e-173 613.2 332 91.6
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 3.4e-165 585.1 332 87.3
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 4.7e-143 511.5 340 75.6
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 4.9e-140 501.5 341 75.7
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 3.2e-139 498.8 332 75.6
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 3.5e-138 495.4 335 74.0
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.1e-135 486.1 331 73.1
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 6.9e-134 481.1 333 73.3
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 2.0e-133 479.6 333 73.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.3e-132 476.9 339 73.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 3.5e-130 468.8 336 68.8
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 4.3e-128 461.8 340 68.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 9.6e-128 460.7 338 68.3
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 3.4e-125 452.2 278 83.1
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 3.4e-125 452.2 335 66.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.5e-125 451.8 335 66.9
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-123 447.2 338 66.6
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 1.4e-123 446.8 342 65.2
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.4e-123 446.0 352 63.9
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 4.2e-123 445.3 341 65.7
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.2e-122 443.7 342 65.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.2e-122 443.7 339 66.1
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.6e-122 443.4 339 64.6
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.6e-122 443.4 339 64.9
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 6.0e-122 441.4 337 65.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.0e-121 440.7 349 63.9
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.0e-121 440.7 338 65.4
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.0e-121 440.7 337 65.0
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.3e-121 440.3 338 66.6
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.8e-121 439.9 336 65.8
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.3e-121 439.5 331 65.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.1e-120 437.2 340 65.3
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.9e-120 436.4 333 63.7
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 2.1e-119 433.0 301 70.8
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.8e-119 432.6 337 64.4
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 8.2e-119 431.0 336 62.8
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 8.2e-119 431.0 336 65.2
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.4e-118 429.5 351 62.4
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 4.0e-118 428.7 302 68.2
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 6.9e-118 427.9 337 65.0
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 9.0e-118 427.6 319 66.8
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.6e-117 426.0 335 63.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 4.5e-117 425.2 299 67.6
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 7.6e-117 424.5 336 61.6
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 7.6e-117 424.5 346 62.7
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.3e-116 423.7 353 63.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 2.9e-116 422.5 333 63.1
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 6.5e-116 421.4 333 65.2
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 8.4e-116 421.0 354 63.3
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.1e-115 420.6 330 63.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 1.1e-115 420.6 363 61.2
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.4e-115 420.2 321 64.8
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.5e-115 419.5 333 61.3
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.5e-115 419.5 342 62.3
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 5.5e-115 418.3 298 67.8
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 9.3e-115 417.5 333 63.4
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.1e-114 416.4 336 63.1
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 4.6e-114 415.2 347 62.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.3e-113 412.9 330 61.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 3.0e-113 412.5 339 62.8
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 6.7e-113 411.4 328 61.9
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.5e-112 410.2 307 67.4
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.9e-112 409.8 310 67.1
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.3e-112 409.1 289 67.1
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.6e-111 406.8 312 63.1
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 1.6e-111 406.8 316 66.5
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.7e-111 405.6 286 67.5
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 4.8e-111 405.2 333 61.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 4.8e-111 405.2 333 61.3
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 4.8e-111 405.2 342 62.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.1e-110 404.1 296 64.9
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.1e-110 404.1 337 60.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.8e-110 403.3 336 61.3
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 3.1e-110 402.5 335 61.2
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.0e-109 399.8 337 61.1
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 2.2e-108 396.4 334 60.5
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.2e-108 396.4 303 65.3
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 6.5e-108 394.8 343 60.3
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-107 393.7 334 61.1
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.4e-107 393.7 352 60.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 5.5e-107 391.7 339 60.2
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.2e-107 391.3 310 61.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-106 390.6 335 60.6
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.2e-106 390.6 335 60.6
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.9e-104 383.3 318 61.9
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.9e-104 383.3 289 66.8
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.8e-102 376.7 324 59.0
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 2.6e-101 372.9 282 64.5
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 8.5e-100 367.9 306 62.1
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.4e-99 367.1 304 57.6
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 6.1e-98 361.7 215 76.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.1e-96 357.5 267 65.9
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.3e-95 354.0 243 69.1
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 2.8e-95 352.8 281 60.1
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 5.3e-94 348.6 319 58.3
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 2.6e-93 346.3 224 68.8
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.4e-91 340.5 353 53.8
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.1e-83 314.3 330 51.2
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 6.7e-81 305.1 243 63.8
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.0e-80 303.5 350 50.6
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 5.2e-65 252.3 238 48.7
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 2.0e-64 250.4 329 41.3
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.8e-63 246.5 277 44.8
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 8.3e-63 245.0 221 58.8
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 7.0e-62 241.9 219 60.7
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 7.8e-61 238.4 212 54.7
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.7e-60 237.3 278 43.2
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 5.0e-60 235.7 203 58.6
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 5.6e-59 232.3 313 43.5
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 7.5e-56 221.9 241 43.6
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-52 210.7 160 64.4
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-49 201.1 305 39.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-44 184.5 267 38.6
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.8e-33 147.5 176 54.0
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.4e-31 139.0 146 55.5
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 4.6e-29 132.9 106 53.8
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 4.8e-18 96.3 138 44.9
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 9.0e-17 92.0 163 39.3
MCO11G180 Micromonas commoda HOM05D006406 ORTHO05D007883 9.0e-17 92.0 222 33.8
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 6.7e-12 75.9 43 74.4
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 9.6e-11 72.0 107 40.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 3.8e-07 60.1 35 71.4


User provided reference genes

Program Settings