Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 9.5e-141 503.4 245 100.0
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.8e-94 349.7 200 82.5
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.1e-85 320.5 207 75.4
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 8.2e-84 314.3 207 73.9
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 5.3e-75 285.0 218 64.2
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 7.0e-75 284.6 206 66.5
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.0e-73 280.8 198 67.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.1e-67 260.8 206 62.1
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.5e-64 249.6 214 56.5
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 4.2e-64 248.8 216 57.9
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.2e-63 247.3 211 58.8
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.6e-63 246.9 216 56.9
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.5e-61 240.4 200 57.5
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.7e-60 236.9 213 56.3
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 4.1e-59 232.3 210 55.2
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 5.9e-58 228.4 214 52.3
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 2.3e-57 226.5 226 50.9
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 3.8e-57 225.7 199 55.3
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.5e-56 223.8 197 54.3
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.5e-56 223.8 197 54.3
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.1e-55 219.9 207 52.7
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 3.6e-55 219.2 198 54.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 2.3e-54 216.5 217 53.9
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 6.8e-54 214.9 219 51.1
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 8.8e-54 214.5 198 52.5
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.5e-53 213.8 209 50.2
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 5.7e-53 211.8 198 53.5
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 7.5e-53 211.5 199 53.3
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 9.8e-53 211.1 197 50.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.2e-52 209.9 197 51.8
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 2.8e-52 209.5 201 51.2
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.4e-51 207.2 209 50.2
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 7.0e-51 204.9 179 52.5
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 7.0e-51 204.9 204 48.0
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 5.9e-50 201.8 227 47.6
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.0e-49 201.1 217 46.5
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.0e-49 201.1 195 51.8
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.3e-49 200.7 200 45.0
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.7e-49 200.3 205 47.3
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.7e-49 200.3 168 53.6
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.8e-49 199.1 202 50.5
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 3.8e-49 199.1 202 50.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 8.6e-49 198.0 206 49.5
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.5e-48 197.2 203 48.3
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.3e-48 196.1 202 49.5
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 9.5e-48 194.5 199 48.7
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.2e-47 194.1 200 48.5
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 4.7e-47 192.2 204 46.6
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 8.0e-47 191.4 198 49.5
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.0e-46 191.0 197 45.2
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 1.8e-46 190.3 208 48.6
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 2.3e-46 189.9 182 47.8
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 5.2e-46 188.7 207 46.9
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 5.2e-46 188.7 198 49.0
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 6.8e-46 188.3 211 46.0
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.9e-46 188.0 211 46.0
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 1.2e-45 187.6 199 49.7
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.2e-45 187.6 211 46.0
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 2.0e-45 186.8 206 48.1
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 2.0e-45 186.8 200 47.0
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 2.0e-45 186.8 211 46.0
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.6e-45 186.4 208 47.6
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.4e-45 185.7 211 45.0
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 5.7e-45 185.3 206 47.1
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 7.5e-45 184.9 173 52.0
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 9.8e-45 184.5 199 48.2
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 2.9e-44 183.0 207 46.4
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 6.4e-44 181.8 203 45.8
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 8.3e-44 181.4 212 46.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.8e-43 180.3 199 46.2
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.8e-43 180.3 199 44.2
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 4.1e-43 179.1 170 51.2
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 3.5e-42 176.0 125 67.2
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 4.6e-42 175.6 197 44.7
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 7.8e-42 174.9 193 43.0
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.0e-41 174.5 220 42.3
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 3.0e-41 172.9 197 43.1
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 5.6e-40 168.7 146 53.4
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 7.3e-40 168.3 195 41.5
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 2.1e-39 166.8 198 41.4
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 8.9e-38 161.4 185 42.2
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.2e-37 161.0 317 33.1
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.5e-37 160.6 219 40.2
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 1.7e-36 157.1 173 43.4
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 6.4e-36 155.2 173 42.8
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 4.1e-35 152.5 204 39.7
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 5.4e-35 152.1 199 41.2
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.0e-34 150.2 195 41.5
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 2.7e-34 149.8 195 39.5
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 2.7e-34 149.8 210 41.4
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 2.8e-31 139.8 172 41.3
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.3e-28 131.0 118 50.8
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 5.4e-27 125.6 126 50.8
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 4.7e-23 112.5 200 34.5
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 8.1e-23 111.7 83 55.4
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.4e-22 110.9 119 45.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 4.0e-22 109.4 125 40.8
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 5.4e-19 99.0 112 43.8
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.6e-18 97.4 71 53.5
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.9e-17 92.8 90 42.2
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 1.8e-14 84.0 182 32.4
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 6.9e-14 82.0 196 31.1
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.4e-13 79.7 81 45.7
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 8.4e-12 75.1 174 25.3
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 1.1e-11 74.7 186 24.7
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 7.1e-11 72.0 74 44.6
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.3e-08 62.8 64 48.4


User provided reference genes

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