Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 3.3e-141 505.0 244 100.0
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 1.5e-130 469.5 244 92.6
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 2.2e-121 439.1 243 86.4
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 1.4e-120 436.4 244 86.1
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 2.8e-116 422.2 244 83.2
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 4.4e-114 414.8 244 82.4
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 1.3e-113 413.3 244 79.9
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 6.4e-113 411.0 244 80.7
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 7.8e-111 404.1 244 80.3
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 1.3e-108 396.7 244 79.1
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 1.1e-107 393.7 244 76.6
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 1.4e-107 393.3 244 78.7
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 2.7e-103 379.0 244 72.5
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 3.5e-103 378.6 245 75.5
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 3.9e-102 375.2 244 72.1
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 5.6e-101 371.3 244 71.7
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 9.6e-101 370.5 221 79.6
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 2.1e-100 369.4 245 72.2
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 8.1e-100 367.5 245 71.4
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 1.4e-99 366.7 248 72.2
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 4.0e-99 365.2 245 71.8
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 9.0e-99 364.0 245 72.7
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 5.8e-98 361.3 245 71.4
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 7.6e-98 360.9 244 70.1
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 9.9e-98 360.5 245 72.2
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 6.4e-97 357.8 245 68.6
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 4.2e-96 355.1 245 70.2
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 4.2e-96 355.1 245 71.8
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 5.5e-96 354.8 246 69.1
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 7.1e-96 354.4 246 70.3
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 9.3e-96 354.0 244 71.3
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 1.2e-95 353.6 245 71.4
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 1.2e-95 353.6 244 69.3
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 2.7e-95 352.4 247 70.0
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 2.7e-95 352.4 244 68.9
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 4.6e-95 351.7 248 70.6
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 4.6e-95 351.7 247 68.8
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 7.9e-95 350.9 251 67.7
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 3.9e-94 348.6 244 69.3
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 5.1e-94 348.2 249 69.5
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 6.7e-94 347.8 245 68.6
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 8.7e-94 347.4 247 68.8
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 8.7e-94 347.4 243 68.3
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 1.5e-93 346.7 245 68.6
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 5.6e-93 344.7 245 69.0
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 9.6e-93 344.0 244 66.8
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 1.6e-92 343.2 244 66.8
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 2.1e-92 342.8 247 66.4
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 2.1e-92 342.8 245 69.8
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 3.7e-92 342.0 244 66.8
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 3.7e-92 342.0 237 68.8
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 4.8e-92 341.7 244 64.3
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 1.1e-91 340.5 247 64.0
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 1.1e-91 340.5 247 64.0
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 1.1e-91 340.5 245 66.9
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 1.1e-91 340.5 246 66.7
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 2.4e-91 339.3 241 69.3
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 3.1e-91 339.0 243 66.3
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 5.3e-91 338.2 245 63.7
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 1.5e-90 336.7 247 68.0
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 2.6e-90 335.9 245 63.3
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 2.6e-90 335.9 223 67.7
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 2.6e-90 335.9 244 63.9
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 2.6e-90 335.9 244 64.3
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 5.8e-90 334.7 245 66.9
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 7.6e-90 334.3 245 66.9
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 1.0e-89 334.0 221 70.1
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 2.9e-89 332.4 245 63.3
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 2.9e-89 332.4 244 63.1
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 2.9e-89 332.4 244 63.1
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 3.8e-89 332.0 245 63.3
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 4.9e-89 331.6 245 62.9
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 6.5e-89 331.3 244 63.9
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 8.4e-89 330.9 245 62.4
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 4.2e-88 328.6 245 62.0
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 4.2e-88 328.6 245 62.0
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 5.5e-88 328.2 246 65.9
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 9.3e-88 327.4 227 69.2
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 1.2e-87 327.0 247 62.8
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 2.1e-87 326.2 247 62.3
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 2.1e-87 326.2 247 62.3
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 2.1e-87 326.2 247 62.3
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 3.0e-86 322.4 251 64.1
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 5.1e-86 321.6 245 60.8
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 5.1e-86 321.6 221 70.1
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 5.1e-86 321.6 222 69.8
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 6.7e-86 321.2 222 71.6
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 8.7e-86 320.9 245 62.0
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 1.5e-85 320.1 246 64.6
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 2.2e-84 316.2 221 69.7
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 2.8e-84 315.8 244 63.5
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 6.3e-84 314.7 227 65.2
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 1.1e-83 313.9 244 61.1
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 2.4e-83 312.8 267 57.7
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 4.1e-83 312.0 222 66.7
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 9.0e-83 310.8 250 63.6
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 1.5e-82 310.1 249 63.9
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 2.0e-82 309.7 272 57.7
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 1.0e-81 307.4 223 65.9
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 9.4e-80 300.8 227 64.8
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 6.1e-79 298.1 223 63.2
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 7.9e-79 297.7 246 58.5
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 3.0e-78 295.8 391 43.7
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 4.3e-77 292.0 237 59.5
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 9.7e-77 290.8 255 59.6
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 1.4e-75 287.0 199 70.4
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 7.4e-69 264.6 189 67.2
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 3.1e-67 259.2 243 55.6
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 2.9e-65 252.7 177 67.8
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 3.6e-55 219.2 154 70.8
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 3.3e-53 212.6 235 44.7
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 6.3e-52 208.4 234 45.7
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 2.4e-51 206.5 237 41.4
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 2.0e-50 203.4 234 44.0
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 1.7e-49 200.3 246 41.5
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 1.5e-48 197.2 248 43.1
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 1.5e-48 197.2 154 59.1
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.2e-47 194.1 231 42.4
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 3.4e-45 186.0 129 65.1
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 5.7e-45 185.3 178 53.9
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 9.1e-43 177.9 226 43.4
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 9.1e-43 177.9 214 42.5
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 9.5e-40 167.9 218 40.8
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 8.0e-39 164.9 287 35.9
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 1.8e-38 163.7 92 77.2
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 3.7e-36 156.0 122 62.3
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 1.8e-35 153.7 229 37.1
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 1.2e-34 151.0 152 49.3
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 6.0e-26 122.1 239 31.0
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 1.6e-18 97.4 255 28.6
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.1e-16 91.3 58 70.7
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 2.3e-14 83.6 46 73.9
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 8.3e-12 75.1 53 66.0
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 1.3e-09 67.8 139 29.5
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 4.3e-08 62.8 168 26.2


User provided reference genes

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