Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 6.8e-99 364.0 185 100.0
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 7.4e-69 264.2 181 77.3
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.4e-67 259.2 181 76.8
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 2.6e-66 255.8 184 75.5
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 2.2e-57 226.1 181 68.0
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 8.4e-57 224.2 184 69.6
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 4.2e-56 221.9 181 67.4
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 6.0e-55 218.0 184 67.9
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 1.8e-54 216.5 187 66.3
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 4.8e-52 208.4 184 65.2
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 1.4e-51 206.8 184 65.8
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 1.4e-51 206.8 186 64.5
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 1.8e-51 206.5 184 65.8
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 2.4e-51 206.1 184 65.8
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 5.3e-51 204.9 186 62.9
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 1.2e-50 203.8 188 64.4
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 1.5e-50 203.4 184 63.0
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 4.5e-50 201.8 183 61.7
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 5.9e-50 201.4 187 64.2
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 7.6e-50 201.1 185 62.2
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 2.2e-49 199.5 184 62.5
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 6.5e-49 198.0 184 62.5
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.9e-48 196.4 183 60.7
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 2.5e-48 196.1 183 61.7
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 4.2e-48 195.3 184 62.0
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 1.6e-47 193.4 188 61.7
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.6e-47 193.4 186 58.6
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 2.7e-47 192.6 188 61.2
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 3.6e-47 192.2 183 58.5
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 4.6e-47 191.8 184 60.9
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 7.9e-47 191.0 185 62.7
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.9e-46 188.7 184 62.0
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 5.1e-46 188.3 183 57.9
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 6.7e-46 188.0 183 60.1
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 6.7e-46 188.0 184 62.0
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.9e-45 186.4 187 60.4
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 2.5e-45 186.0 184 63.0
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 3.3e-45 185.7 183 59.0
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 1.3e-44 183.7 183 58.5
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 2.2e-44 183.0 186 59.7
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 2.8e-44 182.6 182 57.7
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 4.8e-44 181.8 183 57.9
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.4e-43 180.3 186 58.6
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 1.4e-43 180.3 185 56.2
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 3.1e-43 179.1 183 57.4
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 4.1e-43 178.7 186 58.1
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 6.9e-43 177.9 186 57.5
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.2e-42 177.2 183 56.8
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 2.0e-42 176.4 183 57.4
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 2.6e-42 176.0 188 54.8
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.6e-42 176.0 188 54.8
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 3.4e-42 175.6 185 57.8
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 7.7e-42 174.5 185 57.3
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 7.7e-42 174.5 183 59.0
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.0e-41 174.1 185 57.3
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.7e-41 173.3 187 53.5
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.7e-41 173.3 185 57.3
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.7e-41 173.3 188 56.9
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.2e-41 172.9 186 54.3
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 8.5e-41 171.0 182 55.5
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.1e-40 170.6 183 56.3
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 1.1e-40 170.6 182 55.5
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.2e-40 169.1 184 54.9
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 5.5e-40 168.3 189 54.5
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 5.5e-40 168.3 185 55.1
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 9.4e-40 167.5 182 56.0
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 9.4e-40 167.5 190 56.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 2.1e-39 166.4 185 54.6
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 2.7e-39 166.0 186 55.4
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 4.6e-39 165.2 186 54.3
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 1.0e-38 164.1 184 54.9
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 1.0e-38 164.1 191 53.9
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.4e-38 163.7 191 52.9
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.3e-38 162.9 182 54.9
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 5.1e-38 161.8 187 51.3
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.1e-37 160.6 190 53.7
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 3.3e-37 159.1 186 52.2
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 7.4e-37 157.9 182 52.7
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 9.7e-37 157.5 186 51.1
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 1.3e-36 157.1 185 49.7
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.3e-36 157.1 182 56.6
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 2.2e-36 156.4 188 54.3
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 2.8e-36 156.0 186 51.6
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 2.8e-36 156.0 185 53.0
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 3.7e-36 155.6 200 49.5
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 3.7e-36 155.6 185 50.8
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 4.8e-36 155.2 192 50.5
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 1.8e-35 153.3 186 51.1
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 1.8e-35 153.3 186 51.1
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 1.8e-35 153.3 186 51.1
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 2.4e-35 152.9 150 60.7
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 3.1e-35 152.5 191 51.3
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 9.1e-35 151.0 185 48.6
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 9.1e-35 151.0 211 46.9
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 1.2e-34 150.6 194 49.5
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.4e-34 149.1 187 50.8
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.9e-34 148.3 187 52.4
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 3.8e-33 145.6 193 48.7
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 3.8e-33 145.6 196 48.5
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 5.0e-33 145.2 148 56.1
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 5.0e-33 145.2 185 47.0
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.1e-32 144.1 186 49.5
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.4e-32 143.7 181 50.8
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 2.5e-32 142.9 190 48.9
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 4.2e-32 142.1 192 48.4
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 5.5e-32 141.7 194 48.5
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 5.5e-32 141.7 184 48.9
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 9.4e-32 141.0 200 46.0
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.1e-31 139.8 185 47.0
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 4.7e-31 138.7 191 47.6
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 4.7e-31 138.7 187 48.7
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.0e-30 137.5 193 47.7
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 8.8e-30 134.4 181 44.8
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 1.1e-29 134.0 187 48.7
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 4.4e-29 132.1 203 46.3
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.7e-29 131.7 206 47.6
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 9.7e-29 131.0 187 48.1
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.7e-28 130.2 184 44.0
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 2.8e-28 129.4 186 46.8
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 3.7e-28 129.0 186 47.3
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 8.2e-28 127.9 189 42.9
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 8.2e-28 127.9 188 40.4
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.1e-27 127.5 203 46.8
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 1.1e-27 127.5 184 40.2
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.8e-27 126.7 185 41.6
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 1.8e-27 126.7 203 42.9
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 2.4e-27 126.3 181 44.2
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 3.1e-27 125.9 187 46.5
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 5.3e-27 125.2 188 45.7
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 1.2e-26 124.0 180 45.6
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 4.5e-26 122.1 187 47.1
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 7.7e-26 121.3 193 44.6
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 2.2e-25 119.8 182 42.9
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 3.8e-25 119.0 183 42.6
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 5.0e-25 118.6 186 40.9
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 5.0e-25 118.6 188 43.6
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 6.5e-25 118.2 204 40.7
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 9.4e-24 114.4 184 41.8
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 1.2e-23 114.0 182 43.4
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.6e-23 113.6 222 40.1
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 2.1e-23 113.2 188 41.5
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 2.7e-23 112.8 188 42.0
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 4.7e-23 112.1 181 40.9
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 6.1e-23 111.7 210 41.4
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 8.0e-23 111.3 184 38.6
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 1.8e-22 110.2 185 38.9
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 3.0e-22 109.4 182 39.6
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 5.2e-22 108.6 181 39.8
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 8.8e-22 107.8 185 38.9
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 8.8e-22 107.8 185 38.9
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.2e-21 107.5 185 38.9
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.6e-21 106.3 184 39.7
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 2.6e-21 106.3 186 43.0
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 3.3e-21 105.9 182 41.2
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 1.3e-20 104.0 181 40.9
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.1e-19 100.9 182 40.7
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 3.1e-19 99.4 173 40.5
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 4.1e-19 99.0 207 43.5
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 9.1e-19 97.8 199 41.7
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 7.7e-18 94.7 194 39.7
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 1.0e-17 94.4 193 41.5
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 8.5e-17 91.3 197 37.6
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.2e-15 87.4 146 42.5
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 5.2e-14 82.0 90 52.2
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 6.8e-14 81.6 150 40.7
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 4.4e-13 79.0 150 41.3
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.1e-11 74.3 81 54.3
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 5.4e-11 72.0 148 42.6
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 1.2e-10 70.9 186 38.2
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 2.0e-10 70.1 197 36.5
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 5.9e-10 68.6 146 41.8
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 5.9e-10 68.6 177 34.5
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 6.1e-07 58.5 148 33.1


User provided reference genes

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