Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.5e-228 795.8 394 100.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 2.2e-208 728.8 392 91.8
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 3.4e-204 714.9 395 90.6
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.6e-193 679.5 403 85.4
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 2.3e-181 639.0 404 80.0
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.1e-178 630.2 390 83.3
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 7.8e-177 624.0 394 78.4
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.0e-176 623.6 399 78.4
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 9.5e-175 617.1 398 77.4
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 3.4e-172 608.6 400 77.2
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 9.3e-154 547.4 395 69.4
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.6e-153 546.6 394 70.1
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 7.8e-153 544.3 361 74.8
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.7e-152 543.1 408 67.6
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 2.5e-151 539.3 374 71.9
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 3.3e-151 538.9 360 72.8
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 5.6e-151 538.1 388 67.5
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 7.3e-151 537.7 407 66.6
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 9.6e-151 537.3 368 72.0
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 9.6e-151 537.3 385 68.6
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.3e-150 537.0 383 70.2
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.6e-150 536.6 361 73.4
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.6e-150 536.6 407 66.1
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.6e-150 535.4 402 65.9
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 6.2e-150 534.6 340 74.1
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.1e-149 533.9 391 67.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.4e-149 533.5 396 67.2
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.4e-149 533.5 383 69.7
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.4e-149 533.5 385 68.8
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 9.0e-149 530.8 392 68.1
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.5e-148 530.0 384 66.9
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 2.0e-148 529.6 397 67.3
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.0e-148 529.6 397 67.3
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.6e-148 529.3 398 66.8
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.9e-147 525.8 341 73.3
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 3.8e-147 525.4 398 68.1
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 6.4e-147 524.6 404 66.8
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 4.2e-146 521.9 380 66.6
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 4.2e-146 521.9 368 69.6
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 3.5e-145 518.8 294 85.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.8e-144 516.5 404 63.9
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.8e-144 516.5 403 64.3
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 3.0e-144 515.8 390 63.6
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 8.7e-144 514.2 415 61.7
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.1e-143 513.8 385 67.0
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 1.5e-143 513.5 393 65.9
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 3.3e-143 512.3 345 71.6
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 5.6e-143 511.5 407 64.9
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 1.6e-142 510.0 381 65.6
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.6e-142 510.0 408 63.5
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.6e-142 510.0 393 65.4
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 3.7e-142 508.8 344 72.1
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 3.7e-142 508.8 400 65.0
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 6.2e-142 508.1 415 62.7
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 8.1e-142 507.7 362 68.2
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.8e-141 506.5 364 67.3
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.8e-141 506.5 403 64.0
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.8e-141 506.5 403 64.0
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 3.1e-141 505.8 371 67.1
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 3.1e-141 505.8 345 71.3
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 5.3e-141 505.0 379 66.5
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 6.9e-141 504.6 344 69.8
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 9.0e-141 504.2 393 64.9
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 9.0e-141 504.2 400 65.0
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 5.8e-140 501.5 424 60.4
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 7.6e-140 501.1 415 60.0
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 9.9e-140 500.7 405 64.0
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 9.9e-140 500.7 377 64.7
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.7e-139 500.0 405 60.7
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 1.1e-138 497.3 395 63.5
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 1.1e-138 497.3 395 63.5
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.9e-138 496.5 374 64.4
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 1.9e-138 496.5 405 61.0
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 4.2e-138 495.4 309 76.1
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 4.2e-138 495.4 405 60.2
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 5.5e-138 495.0 387 63.8
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 2.7e-137 492.7 344 69.8
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.7e-137 492.7 369 64.8
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.3e-136 489.6 378 65.6
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 1.1e-135 487.3 317 73.8
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.9e-135 486.5 398 61.3
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.9e-135 486.5 343 68.8
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 2.4e-133 479.6 318 70.4
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 9.0e-133 477.6 321 71.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 9.0e-133 477.6 343 67.3
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 8.4e-131 471.1 346 65.0
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 8.4e-131 471.1 433 57.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 5.5e-130 468.4 386 61.4
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.1e-129 466.5 351 65.5
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 1.8e-128 463.4 342 67.8
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 5.7e-127 458.4 345 66.1
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 7.6e-124 448.0 403 58.3
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 3.6e-121 439.1 409 60.4
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 4.1e-117 425.6 349 61.0
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 5.9e-116 421.8 300 69.0
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.1e-113 413.3 367 56.9
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 2.9e-107 392.9 256 72.7
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 5.0e-107 392.1 345 56.5
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 2.5e-106 389.8 248 73.8
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.8e-102 376.3 300 65.3
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.8e-101 373.6 344 59.3
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 3.1e-101 372.9 257 69.6
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 6.7e-96 355.1 270 65.6
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.2e-90 335.1 283 62.5
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 3.8e-83 312.8 239 64.4
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 6.5e-83 312.0 341 44.9
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 9.5e-82 308.1 347 43.8
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 1.6e-68 264.2 342 39.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.1e-60 237.3 180 60.6
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 7.1e-45 185.7 123 68.3
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 6.9e-40 169.1 92 82.6
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 9.9e-39 165.2 177 48.0
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 5.1e-35 152.9 158 50.6
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 5.1e-35 152.9 90 75.6
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.8e-33 147.1 159 49.1
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.0e-32 143.3 125 60.8
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.9e-18 97.8 88 59.1
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.4e-16 91.7 53 69.8
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 9.0e-16 89.0 93 52.7


User provided reference genes

Program Settings