Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 7.3e-133 477.2 243 100.0
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.2e-124 449.9 242 93.0
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 8.3e-113 410.6 243 86.4
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.6e-108 396.4 242 83.9
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 7.8e-95 350.9 242 73.6
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 1.0e-94 350.5 242 74.0
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 5.1e-94 348.2 244 74.6
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 2.0e-90 336.3 244 73.8
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 3.8e-89 332.0 243 72.8
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 6.4e-89 331.3 240 72.5
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-84 317.0 241 69.3
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 5.3e-83 311.6 241 68.5
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 4.9e-81 305.1 242 62.0
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 3.5e-79 298.9 245 65.3
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 3.9e-78 295.4 241 61.8
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 3.3e-77 292.4 243 62.6
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 7.4e-77 291.2 242 62.0
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.6e-76 290.0 245 60.4
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 2.8e-76 289.3 243 60.1
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.8e-76 288.5 244 63.5
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.3e-75 285.0 245 60.4
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 5.3e-75 285.0 242 61.2
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 6.9e-75 284.6 256 59.4
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 2.0e-74 283.1 243 59.7
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.4e-74 282.3 243 60.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.0e-73 280.8 243 60.9
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.5e-73 278.1 243 60.5
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 8.4e-73 277.7 244 60.7
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 1.4e-72 276.9 244 61.5
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 1.4e-72 276.9 247 59.1
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 3.2e-72 275.8 244 58.2
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 5.5e-72 275.0 242 60.3
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 7.1e-72 274.6 255 58.4
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 9.3e-72 274.2 243 59.3
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.6e-71 273.5 243 59.3
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 2.1e-71 273.1 243 60.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 2.7e-71 272.7 241 58.9
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 2.7e-71 272.7 257 57.6
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 2.7e-71 272.7 254 59.4
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 6.1e-71 271.6 255 54.1
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 7.9e-71 271.2 247 60.7
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-70 270.8 243 58.8
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.3e-70 270.4 245 60.8
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.8e-70 270.0 256 55.5
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.8e-70 270.0 241 61.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.9e-70 268.9 243 59.3
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.1e-70 268.5 255 57.6
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.7e-70 268.1 254 56.7
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.1e-69 267.3 224 60.3
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.5e-69 266.9 243 58.8
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.5e-69 266.9 255 56.9
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 1.9e-69 266.5 252 56.3
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.5e-69 266.2 245 58.8
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 8.2e-68 261.2 235 57.4
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.1e-67 260.8 235 60.9
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.8e-67 260.0 247 58.7
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 3.1e-67 259.2 243 56.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 6.9e-67 258.1 185 68.1
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 6.9e-67 258.1 252 54.4
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.5e-66 256.9 254 54.3
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 1.5e-66 256.9 261 52.5
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 2.0e-66 256.5 252 53.2
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 2.6e-66 256.1 234 57.7
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 5.9e-66 255.0 219 60.7
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.7e-65 253.4 248 52.8
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.9e-65 252.7 220 58.6
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 6.5e-65 251.5 232 55.2
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 1.4e-64 250.4 232 56.0
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 2.5e-64 249.6 202 63.9
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.7e-63 246.1 252 52.4
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.4e-62 243.8 250 53.6
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 5.1e-62 241.9 257 50.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.7e-60 236.9 208 59.1
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 2.8e-60 236.1 204 59.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 2.8e-60 236.1 224 55.8
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 3.7e-60 235.7 189 62.4
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 6.3e-60 235.0 222 51.8
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 8.2e-60 234.6 208 58.7
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 8.2e-60 234.6 208 58.7
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.2e-60 234.6 254 52.8
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 1.1e-59 234.2 243 52.3
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 1.8e-59 233.4 208 59.1
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 3.1e-59 232.6 187 63.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 5.3e-59 231.9 244 52.5
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 9.1e-59 231.1 188 62.8
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 9.1e-59 231.1 202 55.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.5e-58 228.8 193 60.1
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 5.9e-58 228.4 172 66.9
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.3e-57 227.3 200 58.5
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 5.0e-57 225.3 222 56.3
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.2e-56 222.6 168 69.6
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 4.2e-56 222.2 244 52.5
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 6.5e-49 198.4 143 66.4
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 4.2e-48 195.7 199 47.7
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 7.2e-48 194.9 187 51.9
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.7e-47 193.0 144 66.0
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 6.7e-46 188.3 181 56.4
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 2.0e-45 186.8 177 52.0
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.2e-44 183.3 184 50.0
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 4.1e-43 179.1 206 44.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 5.3e-43 178.7 243 44.0
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 9.1e-43 177.9 219 47.5
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.7e-41 173.7 182 47.8
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.6e-39 167.2 177 48.0
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 2.7e-39 166.4 222 45.0
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 4.1e-35 152.5 173 52.0
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.5e-32 143.3 211 37.9
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.8e-27 127.1 88 68.2
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 2.4e-27 126.7 142 51.4
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 2.7e-26 123.2 159 43.4
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 5.9e-26 122.1 196 39.3
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 6.6e-25 118.6 104 61.5
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 9.2e-19 98.2 67 68.7
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.7e-18 96.7 159 38.4
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.3e-16 89.7 98 43.9
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.2e-13 81.3 130 38.5
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 1.7e-09 67.4 109 39.4
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 8.6e-09 65.1 44 70.5
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 9.5e-08 61.6 94 39.4
HPP92_026872 Vanilla planifolia HOM05D007174 ORTHO05D009061 4.0e-06 56.2 77 40.3


User provided reference genes

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